slc6a19b (slc6a19b,LOC107743232,LOC107662664,LOC107685553,LOC107596751,LOC105905464)


Basic Information

Item Value
gene id slc6a19b
gene name slc6a19b,LOC107743232,LOC107662664,LOC107685553,LOC107596751,LOC105905464
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12216856 ~ 12226949 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260341.1
TGCTCGCTGCGTCCACTCACAGACAGCCCTTATCTCCCACGGCTCCCTGCTGTCGACAGCATCAGAGATACCCCCCACACAGATACCCACCGCAAGAGAGCCCGGGAGATCATGAAGCTGAAGCTGCCCAACCCAGGCCTGGAGGACAGGATCCTGAACCACGATGAGCTGGAACGGCTGGAGGTGGAGGAGGCCGGAGATAGACCCAAGTGGGACAACAAGGCCCAGTACATGCTGACCTGCGTGGGATTCTGTGTGGGTTTGGGAAACGTCTGGCGCTTCCCCTACCTGTGCCAGAGCCATGGAGGAGggGCATTCATGATCCCCTTCCTAATCCTACTGGTCTTTGAGGGAATCCCTCTTCTCCATCTGGAGTTTGCCATCGGTCAGCGGCTAAGGAAAGGAAGCGTTGGGGTCTGGAGAACTATTAACCCCTACATGCTCGGAGTCGGCATTGCATCGATGTGTGTGTCCTTTCTGGTCAGTCTGTATTATAACACCATCATAGCCTGGGTCATGTGGTACTTCTTCAACTCCTTCCAGGAGCCCCTGCCTTGGAGCCAGTGTCCCGTCAATGCCAACAGGACAGGACTGGTTTCGGAGTGCGAGGGGAGCTCGCCTGTGGATTATTTCTGGTATCGTGAGACTCTGAACACCTCGGCGGCTATAGATGAGACCGGAGGTCTGCAGTGGTGGATGATCCTCTGTCTGATCTCGGCCTGGGGGGTGCTGTACGTCTGCTGCATCCGAGGAATAGAGACCACCGGAAAGGCTGTTTATGTGACCTCTACGTTGCCGTATCTAGTTCTCACGATCTTCCTGATCAGAGGACTGACTCTGAAAGGATCCGTGGATGGCATTAAGTTCCTCTTCACTCCGGATATAAACGAGTTAGCAAACCCAGCCACGTGGTTAGATGCAGGTGCACaagtgttttattcattttcgcTGGCTTTTGGAGGTCTCATCTCTTTCTCCAGCTACAACTCTGTGCACAATAACTGTGAGCAGGATGCAGTAATCATCTCTGTCATTAACGCCTTTACCTCGATCTACGCTGCCACTGTCATCTACAGCATCATTGGTTTCAGAGCTACAGAGAGATTTGATGACTGTCTGAGCGGGAATATCTTGACTCTTCTGAACACATTTGATCTGCCGGAAGCAAACATCACGCAGAGCAACTATCAAGAAGTTCTCCAAAGCCTTAACAGTACAAGCCCTGATATAATCAGCAACCTCAATCTTAAGACCTGTGATCTAAACAACTTCCTCAGTGAGGGTGTAGAAGGGACGGGTCTGGCCTTCATTGTGTTCACCGAGGCAATCACCAAGATGCCACTGTCTCCGCTCTGGTCCGTCCTGTTCTTCATCATGCTCTTCTGCCTCGGCCTGTCCTCCATGTTTGGCAACATTGAGGGTGTTCTGGTTCCCCTGCAGGACCTGAAGGTCTTTCCCAGAAGCTGGCCCAAAGAGGTCATTTCAGGGGTAACGTGCTTGGTGTGCTGCCTGGTTGGGCTGATATTTGTGCAGGGCTCGGGGAACTATTGGCTAGCTCTGTTTGACAGCTTTGCCGGATCGATTCCTCTTCTCATCATTGCTTTCTCTGAGATGATTGGAGTTGTGTATGTCTATGGGATAGACAGGTTCAATGAAGACCTGGTATTTATGATTGGACATAAGCCTAACATTTTCTGGCAAGCCACATGGAGATTTATTAGTCCCCTCATCATGTTAGCCATCTTCATCTTCTACTTCTCCACCATCGTCACCAAAGAAATCTTCTACAGTGCTTGGGACCCTGAATCGGAAAACTTTCCAACCCTAGAGAAGAAGCCATATCCATCGTGGATCTATGTCATAATCTTTCTCCTGGCTGGGATCCCTAGTTTGGCCGTTCCCGGCACTGCTGTTTTCAGAGCCATACGAGAACACTGCTGCAGGAAACATCCCAGTGCCCAGGTTCAAGAGACTGATTCCGTATCGTATAAAGTTCATATACAGGATGAAGAGCTGAAGCCAGAAATGTCAGAGAAATCTGACCAAAAGTTCCACACGTGAGATCCAGTTCATAGTTTTGtatttgaagttttaaaaaatgcctttTCCAGAAGTGCTGGAATTTAACTACTGGATTTTTGCCATTGTGcctcaaaaatattttgtacaaatatttgtCCAAAATTTAGTGGTTCCagcttttgtgtttcaaatTTCCATAACAAAGTAATTTTTACTAAAAGTGTATGGTTAAAGTAAAATATCAATTAAGGCtcatcactatatatatatatatatatatat

Function

symbol description
slc6a19b Predicted to enable symporter activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in floor plate; pronephric duct; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Hartnup disease and iminoglycinuria. Orthologous to human SLC6A19 (solute carrier family 6 member 19).

NR:

description
PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT1-like

GO:

id name namespace
GO:0006836 neurotransmitter transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005328 neurotransmitter molecular_function

KEGG:

id description
K05334 SLC6A19; solute carrier family 6 (neurotransmitter transporter) member 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260341.1 True 2304 mRNA 0.48 12 12216856 12226949

Neighbor

gene id symbol gene type direction distance location
si:ch211-254p10.2 LOC107685554,LOC107596717,LOC107752844,LOC102209663 coding downstream 2507 12208105 ~ 12214349 (-)
rapgef5b LOC107596719,LOC107685551,LOC107581543,LOC107728526,LOC107674937,LOC107743169 coding downstream 13768 12155770 ~ 12203088 (-)
sp8b sp8b,LOC107685617,LOC107596752,LOC107728520,LOC107743231,LOC107684564,LOC101158882 coding downstream 175909 12035907 ~ 12040947 (-)
macc1 LOC107743168,LOC107685548,LOC107596642,LOC107728525,LOC107684550,LOC107550840 coding downstream 203912 12007457 ~ 12012944 (-)
tmem196b tmem196b,LOC107596721,LOC107685588,LOC107728522,LOC107684562,LOC107550817 coding downstream 215949 11999570 ~ 12000907 (-)
LOC122360649 NA coding upstream 165818 12392767 ~ 12397250 (-)
LOC122360109 NA coding upstream 192169 12419118 ~ 12422119 (-)
ccdc12 ccdc12,LOC107743233,LOC107752847,LOC107581540 coding upstream 264549 12491498 ~ 12497557 (-)
setd2 LOC107743179,LOC107685560,LOC107752833,LOC107673014,LOC107581536,LOC107596709 coding upstream 350912 12577861 ~ 12599994 (-)
LOC122361014 mtbp,LOC107596625,LOC107685571,LOC107707175,LOC107673040 coding upstream 579279 12806228 ~ 12825561 (-)
G111716 NA non-coding downstream 65979 12150542 ~ 12150877 (-)
G111713 NA non-coding downstream 77326 12139177 ~ 12139530 (-)
G111712 NA non-coding downstream 79084 12137461 ~ 12137772 (-)
G111690 NA non-coding downstream 136003 12080652 ~ 12080853 (-)
G111689 NA non-coding downstream 139849 12076453 ~ 12077007 (-)
G111788 NA non-coding upstream 210476 12437425 ~ 12439653 (-)
G111789 LOC107662667,LOC107752837,LOC107581613,LOC107581612 non-coding upstream 212837 12439786 ~ 12440874 (-)
G111791 NA non-coding upstream 215004 12441953 ~ 12442613 (-)
G111806 NA non-coding upstream 252485 12479434 ~ 12479788 (-)
G111807 si:ch211-257p13.3,LOC107752836,LOC107581541,LOC107685558,LOC107596636,LOC107673049,LOC107743172 non-coding upstream 253775 12480724 ~ 12480975 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 349541 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 805079 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 829863 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 930424 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 1333432 10857520 ~ 10883424 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 136836 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1427111 13654060 ~ 13683909 (-)
G112478 NA other upstream 2007605 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2271314 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 2355530 14582479 ~ 14587869 (-)

Expression


Co-expression Network