has1 (has1,LOC107714739,LOC107723422,LOC107657615,LOC107699477)


Basic Information

Item Value
gene id has1
gene name has1,LOC107714739,LOC107723422,LOC107657615,LOC107699477
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15799086 ~ 15804702 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260368.1
cgcctggttacaaactttcctTTTACTACATTGTACCACAAGAGGGCAACATATTCTGTTTTTAAGGCAGAGGAGTCCTTGGAGCTATATTGTTCTTTATTCAGCTATTTCATTTACCAAAAgcgcaaacaaaacaaactgaaaaggcaCAAATTTATTGGATAAATTTACAGTATTGATGTTTCTATGAAACAATCACGAGGGCAAGGGGTACGTTTTCTTTCTCACTTCACACCCTCCTGTTGTCTTGATAAAATACTGTAACAGTGAGCAATGTCATCACTGACGAGCCcacaatgcatttataaagtTAAACATGCAACTTACaaaattaagaaagaaagaaagaaaaagaaaataaaaatggaggAAATATGGAAACAGGAACACAAGTTCTCAGATAAAAAACATCAATGTATATTCTTATGTTGTTAGATCAAGAGGAGAAGTCCTCTTAGTTTTTCaccacatatatacatacaaatcaTATAGAAGCTGGATTTCAATGCATAAcaatccattaaaataaagGTACCAGcgatttttagataaaaatttCACCTGTGTGATCAGATTATCAAACGTGCACACCTCGTGAAACATGACTATTCTGTAAGGCACGTTAAACCTAAACAGAAGAATAAAATCTATAATGACCCAAACTGATGATAGTCATTCATCGTCTGTGTTATGCGTACTGACCCAACAAAAACACCCAGAACATCAGAAAGAGGACTACTGAGTTTTGACGTAGAACGTATGAGTCATGGATGGTCCTGTGGGGCGTGATCTGAGCTCAGAAACATTTGTAGCTCATTACACATCTGGAGAAGGATGTTCCCTGAGCTCAGAGCCAGACTATAAGTTTTTTCAGGTCTTGAATGAACAGTTAGTTCAGGAGGAGAGCAGGTCAAAGAAGGAGTGAACAAACCCAGGAATAGcattttcataaaaaaatggaCATCAAACCAGTATTAAGGAAATTTGCCTCTTTGGTCCGAGTCATTCTCACATTTCTCTTTGCTCTGCTGGTACTTGGGGTGATGTTATGGGCATACATCGATGGTTTCCAGATAGCCACATCTCCATATAACATCATCTCCATTGGTTTCTACGGGGTGCTTCTCAGCATTCATGTCCTAATTCAGAGCTTCTTTGCCTTTGTGGAGCATCGGCGCATGAACGCACGGCACAAACCATGCTCCTACACAAAAACCATCGGCTTTACTATATCAGCCTATCAGGAGGACCCTGTCTATCTCCGCGAGTGCCTTCAGTCAGTACGGGCCCTGCAGTACCCATCTGAGCTGCTACGCATTGTCATGGTGGTGGACGGGAACTCCGAAGATGACCGCTACATGTTGGAGATGTTCAGGGAGGTCTTTGAAGACCAGGATCCTGGCTGTTATATATGGCAAAACAACTACCACTCTTGGAAGCCCACTGGCCTTGACAAGAATGCAGCTGAAGCTGATGGTCCAGACGATGAAGTTGTGTTTGAAGACCCTCAGCGCTTAGAGGTTGAAGAACTCATCAGGACcaagaagtgtgtgtgcatcatGCAAAAATGGGGAGGAAAGAGGGAAGTGATGTATACAGCATTCAAGGCACTAGGATCTTCTGTGGATTATATACAGGTGTGTGACTCAGACACAAAATTAGACCCTCTGGCCACAGTGGAGCTCTGCAAGGTGCTGGAGAGCAACAAGAAATACGGTGCTGTGGGAGGCGATGTGATGATCCTTAACCTTAAAGACTCTTACATCAGCTTCATGAGCAGCCTGCGCTACTGGATGGCGTTCAACATTGAGAGGTCCTGCCAGTCCTTCTTCGACTGTGTCTCCTGTATCAGCGGCCCCTTAGGTCTTTATAGGAATGACCTCCTGCAGCAGTTTCTGGAATCCTGGTACAATCAGAAGTTTCTTGGTACCCACTGCACTTTTGGGGATGACCGGCATCTCACCAATCGAATGCTAAGCATGGGCTATGCTACAAAgTACACTGCCCGTTCTAAGTGCTACACAGAGACTCCCGCTCAGTTTCTGCGCTGGCTCAATCAGCAGACGCGCTGGACCAAATCCTACTTCCGTGAATGGCTGTATAACGCTATGTGGTGGCACAAACACCACCTTTGGATGACCTACGAATCCATTGTCTCAGGcatctttcctttttttgtcaCTGCCACCATTATTAAGCTGTTCTGGACAGGCACTCTTTGGGACATTTTGTGGGTCTTGTGCTGCATCCAGTTGATTGGTCTGGTAAAGGCAGCATATGCCTGCATCTTACGACAAAACGCAGTCATGCTCTTTATGTCATTATACTCTGCTCTCTATATGACCAGCCTCCTGCCTGCCAAATACTTTGCCATTATCACCATGAACAAAAGCAGCTGGGGGACATCGGGCCGTCGTAAGATGGTGGGGAACTATATCCCCTTGGCGCCTCTATCAGTGTGGGGGGCCATTTTGTTGGGAGGCCTGGGGTACACTATCTACAGGCAAAACAATGAGACCTGGACAACAGATGGAAAGAAAGAGGAGATCAAGTTTTTGATATTTGGAGTCATAGCTTATGTGTGCTACTGGCTTGTAATGCTCTGCCTCTACTGGGTGTGGTTTCGGAGATTATTCCGAAAGCGCTCACAGAGTTACACTGTGAATGTATAAGACAATTATTTGggcacattatttatttaggaccacttgcacattttttattggtatttttaaatggtttacatgcaattttatttatagactttttttaacttgcaattttatttatgaCGTTTTTTGATATTGcacatattttatgcaatttatgaTGCCTATAAGTATTCAGAGATCAGAAGTGACATGGAGGCGACCGGTCTTTATGAAATGTAATGACTAGACTATATGAAATGTGCGAAAAGCGATCGTATAGAGTCAGCATTCATAATGTACGTTTTTGTGTACAAAATGTAGTATTGAAACCGAATAATAGGAGTATGTTATTAGTGAGGGAATTTGAACATGGCACATTCATTATTAGCACATCATTGGTTGTTAAACATTATTTGAAgaacataaataaattgataCATAGCTACGCAGTGAGCAGCACTGATCATGTGATATTCATATATTAGGATTTGTTACTTTCAGAATGACTACTAAGAAAAATaggacaaatatttaaaaacaaacaattgtgCAAGAAtttccaaatgtttttattttattttatttttatggcgAGCgttgatttaaaatactttctgaTGATTTTAATTTCTGATATAATGTGACAGggcatttttatgttgtttttttagcacTTGAATAAAATATGTTGAGTATGTATACTTAGTGACAAATACTTTTGGCAGCAATATTGTGTAAATGTGAACTTACAAATGTTGGTTATTTAAACAAtacaagaaattaaataaattattttattaaaatatgctgaattatttcaaacatccaattaaaataactatatgcAGGCAgtataaaagtaaatacattgCACTGCTTTTGAATgtgaatgcttttaaaatgtagacCTAGATTGGAGACAAAATGTGACATTTGTCATtcaataaagtcattttaaaatgataaaacaaaatttacttacattttttataatagcaATGTATATGTAGACTAGGGTGCAACTCTATTCCACAACCTTTGGTCTTTGAATGATTTTACAATCCTTgaacaaaatacagtttaagGGAGGATTCCCTGACATTTgtacctccagaccagcagtgACATAAATCAGTTTGGGTGTCATTTACAGCAAAATCAATAACACTGTAGGATAACAGCCCACAAATAAGTTATGGTTGGCCATAATTGAGCTGTGGGATAATATATGCATGATCAATGCAAAGTAAATGATTTAACCTTTTGTGTGATTTAGAGCATCTTGAATCAGAGGCTGAATCAGAACAGGGTGGGAGTCGTTTGGGGGTAATTGCTTCATTTGTGTTGCACCATGTTTAGACTGTTACCAAAGGCAACCAAGGAGGACCCCAATTACAGAGGCTGAGAATTAAAATTTGTTTCAATAAAACcatcaacaaaaaacaaacagccagAAACAAGGGAAAAAAGCTGAATGTTGATGTCTTTAAAACTATA

Function

symbol description
has1 Predicted to enable hyaluronan synthase activity. Predicted to be involved in extracellular matrix assembly; extracellular polysaccharide biosynthetic process; and hyaluronan biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human HAS1 (hyaluronan synthase 1).

NR:

description
PREDICTED: hyaluronan synthase 1-like

GO:

id name namespace
GO:0030213 hyaluronan biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0050501 hyaluronan synthase activity molecular_function

KEGG:

id description
K00752 hasA; hyaluronan synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260368.1 True 4148 mRNA 0.39 5 15799086 15804702

Neighbor

gene id symbol gene type direction distance location
si:dkey-79d12.5 si:dkey-79d12.5,LOC107714671,LOC107595341,LOC107699478,LOC107657668,LOC107723514,LOC107570843 coding downstream 39419 15754181 ~ 15759667 (-)
kcnn4 kcnn4,LOC107595330,LOC107714738,LOC107699521,LOC107723512,LOC107570842,LOC107657667 coding downstream 45176 15735273 ~ 15753910 (-)
LOC122361102 NA coding downstream 74757 15722112 ~ 15724329 (-)
negaly6 LOC107714666,LOC107699454,LOC107657635 coding downstream 77963 15719163 ~ 15721123 (-)
LOC122360743 LOC107699524,LOC107714734,LOC107595292,LOC107595282,LOC107714733,LOC107699523 coding downstream 94906 15699733 ~ 15704180 (-)
prss1 try,LOC107714673,LOC107699515,LOC107595397,LOC107657672,LOC107723506,LOC107593633 coding upstream 62602 15867304 ~ 15869211 (-)
lratd2b zgc:110182,LOC107715046,LOC107699471,LOC107723393,LOC107593723,LOC107595500,LOC107657619 coding upstream 131945 15936647 ~ 15938890 (-)
prelid3a prelid3a,LOC107715058,LOC107723525 coding upstream 154967 15959669 ~ 15963708 (-)
rbfa LOC107699468,LOC107715083,LOC107596252 coding upstream 193610 15998312 ~ 16000648 (-)
LOC122360718 jarid2a,LOC107714830,LOC107595576,LOC107699452,LOC107593646,LOC107657689,LOC107723487 coding upstream 265837 16070539 ~ 16103655 (-)
G113187 NA non-coding downstream 35341 15763469 ~ 15763745 (-)
G113168 ywhabl,LOC107595301,LOC107570839,LOC107723438 non-coding downstream 81200 15709738 ~ 15717886 (-)
G113179 NA non-coding downstream 93027 15705823 ~ 15706059 (-)
G113151 NA non-coding downstream 378659 15418906 ~ 15420427 (-)
G113139 NA non-coding downstream 386243 15407948 ~ 15412843 (-)
G113232 NA non-coding upstream 101531 15906233 ~ 15906830 (-)
G113231 LOC107714685,LOC107699511,LOC107657677,LOC107723481 non-coding upstream 102397 15907099 ~ 15908673 (-)
G113236 klhl38b,LOC107723565,LOC107657680,LOC107593636 non-coding upstream 106610 15911312 ~ 15946683 (-)
G113234 NA non-coding upstream 124520 15929222 ~ 15958664 (-)
G113244 LOC107715075,LOC107699469,LOC107595516,LOC107723556,LOC107593640,LOC107657683 non-coding upstream 160056 15964758 ~ 15967193 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other downstream 126935 15659752 ~ 15672151 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other downstream 302673 15468480 ~ 15496413 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other downstream 423782 15365188 ~ 15375304 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other downstream 492475 15301874 ~ 15306611 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other downstream 783624 14970541 ~ 15015462 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other upstream 12277 15816979 ~ 15819086 (-)
G113220 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 other upstream 52897 15857599 ~ 15861893 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other upstream 196611 16001313 ~ 16006471 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other upstream 208262 16012964 ~ 16013751 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other upstream 334617 16139319 ~ 16141235 (-)

Expression


Co-expression Network