LOC122360080


Basic Information

Item Value
gene id LOC122360080
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23258003 ~ 23261954 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260403.1
AGTAAATCCTGCGTTAATGTGTTCACGCTTCTTATTGGTTACGCCGGTGGCGCTATTGCCCATTGAGTTCACGTAGTCTGCAGCAGAGCTATGAAGGACTACTGTAGGGGAGTCGTTTTTGTTGTAGCTCCATTCCGAAattcaataatataatttcatgtgAAATTTAGGGCACTATCTGAAAGGTGGAATTATAACATCTGCGAACTTGCCGTTTACCTCCTATTGCTCTGTATGCAGgagacaaataaatattcaacGTCATCCAAGTCCAGAGTGTGAGTGCTGATGAAGGGTGGGACAAACCGAGTCAGATCACAAGACCAAAAGGTCACATTGGTGCCGTGACTTAGGACTTCAATCAAGATGGTTGAAGATCATCCAATCATCGAATTGGCGGCCGTGTCTTCATTCTTCACTGCACAGAACCTTCAGCTAAGCTTTTGTTAGTCATTCAGAGACTTTGACAAACAATCAGGAATAGACCCTTAAATAGACACTCTAAAGTACTTGGACATTATTATTGAGTTTGGGGTTTTGCAGCATTTATAGTACACAGTGtatgcattttctttctcttttctatcTCTTTTTCTCAGTTGTTTACCTGTTATTACTTAATTGTGGAAAACACAAGGTTAAATGAATCTGGTTATATAGGCACTCCCTTAAATGTCGGTCGAGGAAGAGGGCTGTTAGTGACACCAATTCATTTTCCAGACATTAGCCCTGGCTCTACTACATGCACTGTAAACAACAGCATGCACACAGAAGCGAATGCCATTCCAGCTCTGAATGCAAATGTGATGCATACCAATTCTGAAACGACTCAGCCAATTAACGCATCGACTCCATTCCATTCCAGTGACATAATGAGTCAGATGGGTAACATAGTGCAGCAAGTAGGACTACAGCTGGCAGATAGTATCCTTGCACATTTGAATTTACACAATCACACAGATGCTGCATCAAAGAGTAGTCATGTCAGTAGATGCACACCCGATCAGAATTCAGTGTCTGATTCTTCCCAGTTCCAAGTTGTGCGTCAAAGGGAAGTCAAAGATCCTCCGAATTTCAGGGGTGACGCATCAGATACTGTTACACTTGATGAGTGGGTGGAGAAAGGGTTTTCTGCCTTTGGAGGAGCAAGGTGAAGAGATTTTAATCCACCTGAGAGGCAAAGCCAAAGATGTTGTTAAGGTGGAGATTCTGTCAAGTGGTTTAGATATTCGAACAAATCCTGATGCAATCTACACCCAATTACACAAGCATTTCAGTTGCCAACAGTATTCTCCTATCCCACTGCAAGATTTCTACACTACTCTTCCGGAACCTCAGGAGGAGCCCTTTGATTACTGGCTACGCTTGAACCGCACTGCGGACATAACAGCTGAGTGTCTAAAGCAACAAGGAAAAGTGCTGGATAATTGGCTGATTGAAGTCACACGAATGTTCATTAGGAATTGTCCAAACTCAGATCTAGTGCTGACTTTCCGTTCAAAGACCATTGACAAATGGACAGCTTCTGAAGTGCAAGAGATCCTGAATGAGTATCATTCAGAGAAAAATATCAGAACAACAGGTAAAGGACATGGACCTGTCAAATGTGAACAGAAATTTTCTGTGAATGAGATGCATGTAAGTCCCAGCACATGCCCAATAAAAGTGGAACAGGACTCACTTCAGTCAAAGCAGTCTGAAACAATGGCTTTAGAAAAGGTGATCAACATGCTGGAGAGGGTTTTGATGAATCACAGTGGTAATGCACACAAACCCAAGGAGAACTTCAGGAAGAGGCGCAATTTGCCTAGAATTCCAGGCTTGAATGCTTCACCATGCTTAGTGTGCAACGAGACCTCACATTCAGCTTTTACTCACTGTAAAAATCACAGGCTCTGTTTCCAGTGTTTCTCGCCTGACCATTCAAGGAATCACTGTCCAAAGGAAGGGAAGGATGCTGCCTCAGTCAACCAGCAGTCAAACTAAGTGATCTACGTGTGAGGGAGGAACACGTAGATCTTGAGAGTGAATCTCCCATTTCTAATTTTGATGACGTAATGGATTATGATTCTTTGTGTCAGATGTTTAGTGATGTATCTTCAGACAAAGTGGTCATCTTTCAGGGTGTACAAAGAGTGCCAAAAGCTGATAGCTTGTTTTACACATCTGCTTCAATTGAGAACGATATCACCTTTAAAGCTTCAATCGACAGTGGATCGATGGCGTGTACTACAGAAAGTTTGCTGAAGAGAAACACAGATATTACAAGTCAGTCAGCACAAGATATTGTCATCATTGGTTGCGGTGGTCACCATGTTACCCCTACAGCAGTCTATGATCTTAAAGCTACAGTGTATGGCTGCTCCATGATAATTCCTGCTTTAGTTGTGCCTGGGCAGACCGAAGAGATGACTTTTGGGCACTAATGTCATAAAATGACTTCTGATGCAATTGAGAGAAACCAATGGTTACTGGAGGCTTGTGTCTAAGTCAAGTAACGTAATCATGAGAATGATGAGTGCTCTATGTTTCTATCTCTTTTCTCTAACACAGAACGATGGAGAGGTGAATCCATACCTGAGAAAGTTGGTACTGTAAAATTGCAAAGGAGTGTGACGTTAGAACCACAAACCGAACATCTGGTTTGGGGAAAGCTACCACAGTCTTCTGTCCTGTCTGTCCCGGCAGCACCGTTATTGTGGAACCAACAGAGTCCAGAGCGAGACAAAGACAAATATTGGTTGGAAAAGTCATAACACCACTATGGGGAGATGGTTCGATCCCCTTGAAAGTCATCACTTTCATAAGAATGATGATGTCTGTCTTTGGAGATGAGAATTTCAGTAGTGTCCTATGTTACCTTGATGATTTAATGGTGTTTGCCCCTTCTGAGTCTGTCGCTCTTCACCGTCTTGAAATGGTTCTCTCTCGGTTGTCACAGCACAATCTAAAGTTGGCTCCaaagaaatgttgtttcttGAGAAGATCAGTGAAATTTCTTGGACATATCATAAGTGAGGAAGGGATTAAGACTGATCCAGGGAAAGTTGAAGCAATTAACAAGATTCAGGCATCTGATTTGATGGAAATCGATGGAAAAACACCATGTCAGAAGAAGATCAGGTCCTTCCTTGGAATGGTTCTGTATTATCAACACTTCATTGAAGGATGTTCGGCAAAAGCAAAGCCACTATTTAAGCTGACATCAGGTGCAGTCAAACAAACTCCTGTCATGAAAGGACGCAAACCAAGAAAGTTAGTTACCTCAAACTTTCCCCAGCTGACTGGACTACGGATTGTGAAGAAGCTTTGCACACTTTAAAACATGAATTGACAAACAGTGTAACACTTGCTCACCCAGACTTTAACCAGCCTTTCATTTTAGCTGTTGATGCATCTTTCGATGGAGTCGGTGCTGTGTTGTCGCAGGTTCTGCCAGGTGAAGACTTTGCCAGGCCTGTAGCCTTTGCAAGTAGAACTCTGTCTCGCTCACAAATGAACTATCCAGCTCACAGATTAgagtttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260403.1 True 3526 mRNA 0.42 3 23258003 23261954

Neighbor

gene id symbol gene type direction distance location
LOC122359973 LOC107672119,LOC107552844,LOC107704924,LOC107716832 coding downstream 3427 23251560 ~ 23254576 (-)
styk1b LOC107587900,LOC107714598,LOC107724775,LOC107704922,LOC107672192,LOC107552846 coding downstream 8206 23244256 ~ 23249797 (-)
rap1gapl si:ch1073-90m23.1,LOC107724779,LOC107587789,LOC107672182,LOC107704921,LOC107714601 coding downstream 24215 23224070 ~ 23233788 (-)
rbfox1l rbfox1l,LOC107704918,LOC107587790,LOC107714602,LOC107724799,LOC107552848,LOC107672019,LOC103045177,LOC108443663 coding downstream 36652 23209559 ~ 23221351 (-)
cdc42l cdc42l,LOC107552852,LOC108433756,LOC108272678,LOC105029961,LOC108443667 coding downstream 82562 23169518 ~ 23175441 (-)
LOC122359881 LOC107716830,LOC107587785,LOC107682987 coding upstream 2332 23264286 ~ 23266472 (-)
cnot3a cnot3a,LOC107711735,LOC107587779,LOC107700763,LOC107552836,LOC107704926 coding upstream 44740 23306694 ~ 23314761 (-)
kpna5 kpna5,LOC107704934,LOC107716841,LOC107552832,LOC107711738 coding upstream 77497 23339451 ~ 23348014 (-)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695,LOC107552826 coding upstream 96519 23358473 ~ 23361374 (-)
calhm5.1 LOC107704861,LOC107716815,LOC107587898,LOC107711741,LOC107552825 coding upstream 100383 23362337 ~ 23367373 (-)
G115631 NA non-coding downstream 68353 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 90063 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 180133 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 184553 23072259 ~ 23073450 (-)
G115601 rcc1,LOC107597108,LOC107700729,LOC107704965 non-coding downstream 201473 23056095 ~ 23056530 (-)
G115669 NA non-coding upstream 64254 23326208 ~ 23327893 (-)
G115910 NA non-coding upstream 553943 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 554946 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 558565 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 782806 24044760 ~ 24057262 (-)
G115554 NA other downstream 324036 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 356816 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1168911 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1289468 21964855 ~ 21968535 (-)
G115149 NA other downstream 1454199 21801475 ~ 21803804 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 257854 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 321039 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 406111 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 1055528 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 1102686 24364640 ~ 24369566 (-)

Expression


Co-expression Network