Gene
RNA
| Item | Value |
|---|---|
| gene id | G10149 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 15776574 ~ 15776917 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU11176 | True | 344 | lncRNA | 0.56 | 1 | 15776574 | 15776917 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_15684820_15696865 | NA | coding | upstream | 79459 | 15684495 ~ 15697115 (+) |
| CI01000000_15620007_15622711 | PCDH11X | coding | upstream | 153732 | 15620007 ~ 15622842 (+) |
| CI01000000_15519933_15528742 | PCDH11X, PCDH11 | coding | upstream | 247679 | 15519933 ~ 15528895 (+) |
| CI01000000_15158265_15165627 | NA | coding | upstream | 610302 | 15157022 ~ 15166585 (+) |
| CI01000000_15120586_15123050 | TSC22D3, TSC22D3.L | coding | upstream | 652926 | 15120384 ~ 15123648 (+) |
| CI01000000_15893372_15894283 | NEUROG1 | coding | downstream | 114762 | 15891679 ~ 15894893 (+) |
| CI01000000_15964514_15964804 | NA | coding | downstream | 187410 | 15964327 ~ 15964961 (+) |
| CI01000000_16011590_16014992 | NA | coding | downstream | 234673 | 16011590 ~ 16015151 (+) |
| CI01000000_16034357_16056363 | SMAD5 | coding | downstream | 256981 | 16033898 ~ 16056594 (+) |
| CI01000000_16066787_16081915 | LMAN2 | coding | downstream | 289392 | 16066309 ~ 16082483 (+) |
| G10117 | NA | non-coding | upstream | 31909 | 15744388 ~ 15744665 (+) |
| G10102 | NA | non-coding | upstream | 59546 | 15716617 ~ 15717028 (+) |
| G10062 | NA | non-coding | upstream | 303366 | 15472925 ~ 15473208 (+) |
| G10042 | NA | non-coding | upstream | 334880 | 15441340 ~ 15441694 (+) |
| G10026 | NA | non-coding | upstream | 358266 | 15416473 ~ 15418308 (+) |
| G10153 | NA | non-coding | downstream | 2996 | 15779913 ~ 15780135 (+) |
| G10080 | NA | non-coding | downstream | 6321 | 15783238 ~ 15783518 (+) |
| G10052 | NA | non-coding | downstream | 95484 | 15872401 ~ 15881522 (+) |
| G10200 | NA | non-coding | downstream | 152751 | 15929668 ~ 15929964 (+) |
| G10203 | NA | non-coding | downstream | 154343 | 15931260 ~ 15931467 (+) |
| G9201 | NA | other | upstream | 1541633 | 14215024 ~ 14234941 (+) |
| G7522 | NA | other | upstream | 3597566 | 12178369 ~ 12179008 (+) |
| G7514 | NA | other | upstream | 3639566 | 12136522 ~ 12137008 (+) |
| G7153 | NA | other | upstream | 4530941 | 11244457 ~ 11245633 (+) |
| G7018 | NA | other | upstream | 4795702 | 10978489 ~ 10980872 (+) |
| G10201 | NA | other | downstream | 153349 | 15930266 ~ 15930562 (+) |
| CI01000000_17339270_17345013 | CXCL14, CXL14 | other | downstream | 1562237 | 17339154 ~ 17346200 (+) |
| G11465 | NA | other | downstream | 2107036 | 17883953 ~ 17887462 (+) |
| G11521 | NA | other | downstream | 2255822 | 18032739 ~ 18164112 (+) |
| G11801 | NA | other | downstream | 2903950 | 18674116 ~ 18745376 (+) |
