LOC122360089


Basic Information

Item Value
gene id LOC122360089
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14717064 ~ 14719580 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260412.1
CAACAGTGAAAGTGAAGTAGAGTTCTGCTGTCTTGCAGTGAGCATCTCTACTGTATACGATGAGGACTTTTCGGTCTTTACATCTCCAACTTCTGTATCTTCTTATAACGGCTTTATTAGAATGTAAAGCTCAAAAGAAGCAAGTTCTTCAGTTGAACATAAACTCTTTCAGAGGTGACAATATGTCTATTTCTTGCCTAACCACAACTCACCCGCTAGAGTCTCTGACAGTCAAACTGCGCAGTATCAAACCGGTTAAAGACATCCTGGTGTATCCAGACATCTCTCCAGCGTCAGAGCACCAGAGATGGTCTGTGAGGAAAGAAGCTGGAAATGTTACTCTCGATCTGAAAGACATCAGATTAACAGATGATGGTCTTTATGACTGTCAGGTGTACAAGGATCAGGACTGCCTTCATGCAACTCAGTTTAACCTGAAGGTCAAAGAGTGTGAAAAATTGAACCCGGTCCATGCGACATTTAACTCTTCAGTGTTGTTGCAATGCATTGAGCATCCACGACAAAACATGACTCATCAAGTTACTTGGAAAGTCATTGTTGGTCACCAACTAACAGATATAACTCGGTATCCCCATTCAAAAAATCCTTCAAGCGGCACAGAGAAACGCTCGAATCCTCTTTATGAGAGAGCAAGACAACTAGTGAACGGATCTCTGCTTATAAGAAACGCAGTCCACGATGATGAATTGTGGTATCAGTGCAGACTGGATGAAAAATCCTGCTTCGAATTGAAGCTGCTAATAAAAGGTGCATTTCCTGAAACACTTTCCACAACATTGGAAGCCACAGTCTCTGCTGACAGTCCTTTGGTCCAGGGCGAAAGCGACATAAATGAGAGCGAATCAGAGACAGCTAGTTTGTCAGCGGTGGTGTTGACCACAGTagtgtctctgtgtctcctgATGTTACTGACCATCTGTCTCATTCtgtatttcaaaaaaagaagatgCAAAACCAACAGCCAAACGCAACTAAGTGACCGGTTCTCTGTAAATTACTCCGAAATTGTGGATGGATTTGGTGTcccattttattctttaattgaACAAAACACAGCAACTATGTGCACCTTTGTTCCTGAACAATCAGAAGCCCCTGCATGTAAACCAGACAACACGTATGAAACAagtacaggtttttttttgtgatgtcaGATTGGGAAATTGCTAATTTAGTAATTGCATGGCATCTCtcacaaattataataaagtgGAACATCTTTTATACACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260412.1 True 1253 mRNA 0.41 7 14717064 14719580

Neighbor

gene id symbol gene type direction distance location
tuft1a LOC107582063,LOC107723549,LOC107714678,LOC107673742,LOC107594884 coding downstream 2098 14701898 ~ 14714966 (-)
si:dkey-92i15.4 LOC107714676,LOC107673754,LOC107594846,LOC107577098 coding downstream 19976 14687731 ~ 14697088 (-)
aqp10a aqp10a,LOC107673770,LOC107714675,LOC107596410 coding downstream 28896 14682828 ~ 14688168 (-)
atp8b2 atp8b2,LOC107677029,LOC107714674,LOC107667702 coding downstream 39306 14651573 ~ 14677758 (-)
il6r LOC107667704 coding downstream 66172 14643888 ~ 14650892 (-)
LOC122360979 LOC107673736,LOC107714679,LOC107723515,LOC107677031,LOC107582064,LOC107596123,LOC561423 coding upstream 7505 14727085 ~ 14746625 (-)
s100t LOC107714712,LOC107594934,LOC107673706,LOC107677025,LOC107582066,LOC107723416 coding upstream 176641 14896221 ~ 14899047 (-)
pbxip1b LOC107714683,LOC107673634 coding upstream 194368 14913948 ~ 14924517 (-)
LOC122361105 LOC107582131 coding upstream 206712 14926292 ~ 14926896 (-)
shc1 shc1,LOC107714692,LOC107677023,LOC107723450 coding upstream 207457 14927037 ~ 14957235 (-)
G112686 NA non-coding downstream 1573 14715216 ~ 14715491 (-)
G112659 NA non-coding downstream 62914 14591362 ~ 14654150 (-)
LOC122359963 NA non-coding downstream 78732 14633214 ~ 14638332 (-)
G112612 NA non-coding downstream 388861 14327952 ~ 14328203 (-)
G112483 NA non-coding downstream 413529 14303124 ~ 14303535 (-)
G113034 NA non-coding upstream 172460 14892040 ~ 14892395 (-)
G113039 NA non-coding upstream 227015 14946595 ~ 14947384 (-)
G113073 NA non-coding upstream 391253 15110833 ~ 15197354 (-)
G113090 NA non-coding upstream 445417 15164997 ~ 15165440 (-)
G113092 s100a10b,LOC107714718,LOC107595024,LOC105891828 non-coding upstream 448793 15168373 ~ 15170070 (-)
LOC122359961 riiad1 other downstream 129195 14582479 ~ 14587869 (-)
dicp3.3 NA other downstream 213928 14498263 ~ 14503136 (-)
G112478 NA other downstream 415445 14234554 ~ 14301619 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other downstream 1033155 13654060 ~ 13683909 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 2338615 12363785 ~ 12378449 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 179602 14899182 ~ 14904907 (-)
LOC122359907 LOC107594909 other upstream 189040 14908620 ~ 14913646 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other upstream 250961 14970541 ~ 15015462 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other upstream 582294 15301874 ~ 15306611 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other upstream 645608 15365188 ~ 15375304 (-)

Expression


Co-expression Network