G10153


Basic Information

Item Value
gene id G10153
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 15779913 ~ 15780135 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11180
GACATATTGTATTTGCGCTCAGCTTGTCACTGTTCCTAAAACTGGAGTCAGACAGCAGACTTAGATGAATTTAGAAGGGTGTTTAATTAATAATCATGACACAGCCTAGGGAGCATTTCTGATGTAATTGCAGCCTATTATTTACTAACGTTACCAAAGTTGTTAGAAGTGTTTAGGGTGTTAAACTTGGGCTTATGTTTGATAGACTTTTATTCTCTTATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11180 True 223 lncRNA 0.52 1 15779913 15780135

Neighbor

gene id symbol gene type direction distance location
CI01000000_15684820_15696865 NA coding upstream 82798 15684495 ~ 15697115 (+)
CI01000000_15620007_15622711 PCDH11X coding upstream 157071 15620007 ~ 15622842 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding upstream 251018 15519933 ~ 15528895 (+)
CI01000000_15158265_15165627 NA coding upstream 613641 15157022 ~ 15166585 (+)
CI01000000_15120586_15123050 TSC22D3, TSC22D3.L coding upstream 656265 15120384 ~ 15123648 (+)
CI01000000_15893372_15894283 NEUROG1 coding downstream 111544 15891679 ~ 15894893 (+)
CI01000000_15964514_15964804 NA coding downstream 184192 15964327 ~ 15964961 (+)
CI01000000_16011590_16014992 NA coding downstream 231455 16011590 ~ 16015151 (+)
CI01000000_16034357_16056363 SMAD5 coding downstream 253763 16033898 ~ 16056594 (+)
CI01000000_16066787_16081915 LMAN2 coding downstream 286174 16066309 ~ 16082483 (+)
G10149 NA non-coding upstream 2996 15776574 ~ 15776917 (+)
G10117 NA non-coding upstream 35248 15744388 ~ 15744665 (+)
G10102 NA non-coding upstream 62885 15716617 ~ 15717028 (+)
G10062 NA non-coding upstream 306705 15472925 ~ 15473208 (+)
G10042 NA non-coding upstream 338219 15441340 ~ 15441694 (+)
G10080 NA non-coding downstream 3103 15783238 ~ 15783518 (+)
G10052 NA non-coding downstream 92266 15872401 ~ 15881522 (+)
G10200 NA non-coding downstream 149533 15929668 ~ 15929964 (+)
G10203 NA non-coding downstream 151125 15931260 ~ 15931467 (+)
G10185 NA non-coding downstream 152849 15932984 ~ 15933376 (+)
G9201 NA other upstream 1544972 14215024 ~ 14234941 (+)
G7522 NA other upstream 3600905 12178369 ~ 12179008 (+)
G7514 NA other upstream 3642905 12136522 ~ 12137008 (+)
G7153 NA other upstream 4534280 11244457 ~ 11245633 (+)
G7018 NA other upstream 4799041 10978489 ~ 10980872 (+)
G10201 NA other downstream 150131 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 1559019 17339154 ~ 17346200 (+)
G11465 NA other downstream 2103818 17883953 ~ 17887462 (+)
G11521 NA other downstream 2252604 18032739 ~ 18164112 (+)
G11801 NA other downstream 2900732 18674116 ~ 18745376 (+)

Expression


Co-expression Network