LOC122360106



Basic Information


Item Value
gene id LOC122360106
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 2700321 ~ 2700949 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043260444.1
CATAGTTATGGAATATCCGCATCCATGCGAGACCTTGCTAGACTTTTCCATGCGCCATGGAAATCGCCTAGATGAATCTGTGGCACGTGGCTTAATGCGGCAAGCGGTGCTTGCAGCTAAACACTGCATTGAACGGGGTATTTTCCACAATGACATCAAGACGGACAATTTGCTGGTCAACACAGAGACACTGCAGCTCAaactaatagactttggctgtAGTCAACGTATTAACATGTCTTGTTCTGAAGATCATCAATATGCAGTCAAATCAACAGTCTGGTCTTTGGCTACAACACTTTTGGAAATAGTATGCGGAGAACGGCCCATAAGTGATTTTCTCTACAATGCACATCATCCTTTGACTCCAAATACTTCCACTGGTGAGTCTACAGCACACATcaataatacacacattaagTCGTGGTACAATATCAGAGTGTTTACAGTACCAATGACAAATTAACAAAGTGTAACACACAGGAGATTGCccttatttaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043260444.1 True 501 mRNA 0.42 2 2700321 2700949

Neighbor


gene id symbol gene type direction distance location
LOC122360634 prdm1,prdm1a,LOC107661008,LOC107551748,LOC107697283,LOC107581686 coding downstream 689655 2000781 ~ 2010666 (-)
med18 med18,LOC107714426,LOC107661027,LOC107697268,LOC107720175 coding downstream 980206 1718035 ~ 1720115 (-)
foxo6a LOC107714419,LOC107551733,LOC107661026,LOC107720174,LOC107697267,LOC107581751 coding downstream 995600 1684904 ~ 1704721 (-)
nt5c3a LOC107714420,LOC107661006,LOC107551731,LOC107697280,LOC107720166,LOC107581689 coding downstream 1037694 1656548 ~ 1662627 (-)
si:ch73-341k19.1 LOC107551746 coding downstream 1045794 1648367 ~ 1654527 (-)
sim1a sim1a,sim1,LOC107697271,LOC107661021,LOC107551726 coding upstream 198364 2899313 ~ 2915431 (-)
ascc3 ascc3 coding upstream 214706 2915655 ~ 3064578 (-)
hace1 hace1,LOC107679309,LOC107661011,LOC107598938 coding upstream 983169 3684118 ~ 3699070 (-)
csf3r NA coding upstream 1028193 3729142 ~ 3743612 (-)
LOC122360352 zgc:91890,LOC107559041,LOC107689180,LOC107688990,LOC107713919,LOC107726234 coding upstream 1458538 4159487 ~ 4160521 (-)
G109522 NA non-coding downstream 19983 2677203 ~ 2680338 (-)
G109509 NA non-coding downstream 170322 2528804 ~ 2529999 (-)
G109503 NA non-coding downstream 176832 2523132 ~ 2523489 (-)
G109500 NA non-coding downstream 186754 2512775 ~ 2513567 (-)
G109490 NA non-coding downstream 299429 2400686 ~ 2400892 (-)
G109531 NA non-coding upstream 107427 2808376 ~ 2808754 (-)
G109538 NA non-coding upstream 124479 2825428 ~ 2828623 (-)
G109544 NA non-coding upstream 141103 2842052 ~ 2842281 (-)
G109607 LOC107667969,LOC107661009,LOC107714403 non-coding upstream 642981 3343930 ~ 3418605 (-)
G109614 NA non-coding upstream 923693 3624642 ~ 3625012 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other downstream 736160 1741120 ~ 1964161 (-)
G109287 NA other downstream 1817569 882459 ~ 882752 (-)
G109275 NA other downstream 2067424 632465 ~ 632897 (-)
G109600 NA other upstream 412893 3113842 ~ 3129979 (-)
G109724 LOC107084717,LOC106511825 other upstream 1393808 4094757 ~ 4095504 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other upstream 2531262 5232211 ~ 5245558 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 3081718 5782667 ~ 5790534 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other upstream 3116091 5817040 ~ 5818618 (-)

Expression



Co-expression Network