cmtm8b (LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991)


Basic Information

Item Value
gene id cmtm8b
gene name LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9319555 ~ 9322529 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260449.1
AACCCTTCACCATAGTAGGTTTCCTTTAGTTTAGGTGCAGGGATCACTTCTCGGTTTATTCCGGGAGTTCTTGTAATTCCGTTAGAATGGAGATCGACTCCGAGTCCCGCGCCGACAGCACCAGCACCATTACTGACAGAACCAGGAAGAGCTCAAATATAGAGAGTTTAGGTTTGTCTCACTCCAAGCTGGCTTACGATGGAAACTTTATTCGCTCTGCTTCTGGCGCGTTTATGGCTGGAGAAATCGTGTTTGGGCTTCTGGTGTGGACTCTGATTGGTGGGACAGAGTACCTCCATGTTCCTGCACTGGTATGGGTAATGTTTGTGTCAGTGTTTTATTGGGCGCTTACTGTCATTCTCTTCCTCATATACCTGACTATGGCCCACACCAGGATTCCCCAGATCCCATGGAAAATTTCGGGAATATGTTTTAATGGCAGTGCCTCTGTATTGTACCTGGCAGCGGCTGTGATTTGTGGCATATCTTTGAATGTGGCCATTAAGGGGCGCTACTACTTCATCAGCTGGGTTGCATCGACGATATTTGCCTCACTGGCTATGGTGTGTTATGCAGGAAACACGGTTGTGAATTTCAAATCGTGGAGAACAAAAAGTGAAGAGACATaaggaaatgtttttagtttgtttttagtCTGTTCGTTTTTACTATCCCTGGGGGATCATttctgcaaattaaaataatcacatAAAAAGGTAATTTTGCTGTggttaaaatgccaaaaatatgTGTAGCATCTGTCCTGTAAGTAAAACTTGAACTGTAAACTACGAaagatttaaaagtttttatcttctttttaatgattattgtTGCAGAACAAAACAATCTTTTAAGCCCATGCTGTATCACTATGGTAAGCCTACTGTAATGATTTATATGCAGAGTTGTTGGATTCACTTTGTTGGGAAGTTTTAGGATTTTATAATTTATCTTTGCTTGAATAAAAAGGGCAATTATTACGTAAAATCCATTTTACTTGATATTTGTGTACACACCTACCCTATAACGGTAAAAATGCACctaattcttttttatattcactGTAAATCATAAACATAGTCTCAAAAAGAGTGCtgtcatttcaatcatttcaatcatttttattta

Function

NR:

description
PREDICTED: CKLF-like MARVEL transmembrane domain-containing protein 8

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260449.1 True 1131 mRNA 0.39 4 9319555 9322529

Neighbor

gene id symbol gene type direction distance location
LOC122360802 LOC107749154,LOC107596765,LOC107686954 coding downstream 162134 9149115 ~ 9157421 (-)
LOC122360027 LOC107751895,LOC107656720 coding downstream 170556 9145900 ~ 9148999 (-)
ptpn2a LOC107748621,LOC107656702,LOC107686952 coding downstream 201437 9112262 ~ 9118118 (-)
cep76 cep76,LOC107684173 coding downstream 208800 9103514 ~ 9110755 (-)
id4 id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867 coding downstream 289849 9026980 ~ 9029706 (-)
ulk4 ulk4,LOC107723070,LOC107704090,LOC107570990,LOC107668185,LOC107657572,LOC107564876,LOC107573651 coding upstream 64981 9387510 ~ 9523997 (-)
ccka LOC107751914,LOC107704089,LOC107601665,LOC107657574 coding upstream 304717 9627246 ~ 9629046 (-)
trim71 trim71,LOC107751884,LOC107601676,LOC107704101,LOC107657583,LOC107723073,LOC107551222 coding upstream 355694 9678223 ~ 9702267 (-)
tcaim tcaim,LOC107657582,LOC107723074,LOC107751885,LOC107601675,LOC107704100 coding upstream 383311 9705840 ~ 9714651 (-)
abhd5a abhd5,abhd5a,LOC107657580,LOC107751913,LOC107704099,LOC107723076 coding upstream 455788 9778317 ~ 9787092 (-)
G110897 NA non-coding downstream 128216 9126685 ~ 9191339 (-)
G110852 NA non-coding downstream 288106 9031135 ~ 9031449 (-)
G110849 NA non-coding downstream 312023 9007297 ~ 9007532 (-)
G110842 NA non-coding downstream 314349 9004538 ~ 9005206 (-)
G110836 NA non-coding downstream 318127 9000787 ~ 9001428 (-)
G111005 NA non-coding upstream 63650 9386179 ~ 9387391 (-)
G111021 LOC102788557 non-coding upstream 277403 9599932 ~ 9607073 (-)
G111024 NA non-coding upstream 297590 9620119 ~ 9620453 (-)
G111025 NA non-coding upstream 301171 9623700 ~ 9624119 (-)
G111045 NA non-coding upstream 352335 9674864 ~ 9676505 (-)
G110974 NA other downstream 46950 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 167372 9145930 ~ 9152183 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 683333 8633350 ~ 8636222 (-)
G110556 NA other downstream 1002870 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 1017310 8298789 ~ 8302245 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 554682 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1423047 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1534991 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 1947091 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 2010646 11333175 ~ 11386993 (-)

Expression


Co-expression Network