LOC122360109


Basic Information

Item Value
gene id LOC122360109
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12419118 ~ 12422119 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260450.1
GCCGACTTGTGACTTCAGCTCTTGCTTTTGGACAGGGAACAATGAACCAACTAGTAACATATGAGGCTATGTCAGTTGTTGGGCCTCTAAATGAGGGAATTTTCTCAGTCTATAACATCTGCCGGTGTTTATTGGATGTTAAAGTAGATACCACCACTGATAAATGCTCAAATTATCAAGAAATAAGGAGACATATTGAGCATGCTGAGCAGTCCCTAAAAAAATCGGAGACAATGATTAacgaaaaactgaaaaatctgGATGAATGCATGTGCCAGTATTTAAGAGAGAAGACAAATCTGGAGAACctgaagacagaaaaaaacatggctgtttttaaattagaaCTCGACAAGAAATATATGGAAGACTTATTAAAGAATACAAATAATGCTCTGGAGCAGGCTACAAAAAAACTTGAATCTGCCAAATATGCCTCAAGAATAGAAGAAGAAAGGTTGGAAACAAATGGAAAAGTTTTCGCTGCAGGGGCGGCACTGCTTGTATTACCAATTGCTGGATGGATTGCTGgTCCAATAATGATGGCTACGGCAGATCAGGCATGGAAAGAGTCTTTAGATGCCATCCAAGCTGCTGAAGAGGAGATACAAAAGTGTAAAGAAAATGCAAACCGTTACACCAGACAAAAATTTGATTACAAGATAAACATCCTTAATACAGAAGCTGAAATTATACGGACCAATACGGCACTGATAAAAATTGAGAATAAgattaaagatgttaaaaagTACCTAAAGGAGACAACTGATATTCAGGAAAAGGTCAGAGGGGCTGTGATGTCTCTGAGTGTTCTTAGTGGAAGAGTCACAGTACtggagagacaaacacagtgttTCATCCTCTGGCAGCCTGTGGTACAAGCCATGGAAGATGTGGTGAGGGCAGTAGGAAATATCACTGAGAACTGGCTGCTTTACAGGCATGGTGCACCATTCTACATTAATGCTTTGAGAGAGGATGTTAGACGCCTGGCTTTATGCAACTCGCCCAATGAATCTAAATATGACTGGCAGATTGAAAGTGAATACATTTAATGACCATCTTCATGTAACTTGCATAGCAAtggatgaaataataaaaaaaatggatttgtaATTTGTAGAAAATtttgaatgttaatttttgCAATGAGGGAACAGTTTAGATTCGGCTGAAATGTTGTATTGTTGTATTGTATTCtgcttatgtaaaaaaaaaaaaaaaagcatgatgatttcatataaaaaagggtgtttgtttaaaattgcaataaccAATTGATAAACAGGAATTTACAAGAtcactgtaagaaaaaaaattacagaaaaaaaatgtacagtaaaaaaaaattggcagcTAGCTACTGGTTGTCAGTAATTTACTGTGACTGTtactcttttatgtttttaaaatgtatggcAAATAAACTATTGATTTAAATTAGCTGTGGTTGt

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260450.1 True 1454 mRNA 0.36 4 12419118 12422119

Neighbor

gene id symbol gene type direction distance location
LOC122360649 NA coding downstream 21868 12392767 ~ 12397250 (-)
slc6a19b slc6a19b,LOC107743232,LOC107662664,LOC107685553,LOC107596751,LOC105905464 coding downstream 192169 12216856 ~ 12226949 (-)
si:ch211-254p10.2 LOC107685554,LOC107596717,LOC107752844,LOC102209663 coding downstream 204769 12208105 ~ 12214349 (-)
rapgef5b LOC107596719,LOC107685551,LOC107581543,LOC107728526,LOC107674937,LOC107743169 coding downstream 216030 12155770 ~ 12203088 (-)
sp8b sp8b,LOC107685617,LOC107596752,LOC107728520,LOC107743231,LOC107684564,LOC101158882 coding downstream 378171 12035907 ~ 12040947 (-)
ccdc12 ccdc12,LOC107743233,LOC107752847,LOC107581540 coding upstream 69379 12491498 ~ 12497557 (-)
setd2 LOC107743179,LOC107685560,LOC107752833,LOC107673014,LOC107581536,LOC107596709 coding upstream 155742 12577861 ~ 12599994 (-)
LOC122361014 mtbp,LOC107596625,LOC107685571,LOC107707175,LOC107673040 coding upstream 384109 12806228 ~ 12825561 (-)
col14a1a col14a1a,LOC107685600,LOC107707159,LOC107672958 coding upstream 416942 12839061 ~ 12944070 (-)
deptor deptor,LOC107685573,LOC107673035,LOC107596624,LOC107743215 coding upstream 525831 12947950 ~ 12975794 (-)
G111716 NA non-coding downstream 268241 12150542 ~ 12150877 (-)
G111713 NA non-coding downstream 279588 12139177 ~ 12139530 (-)
G111712 NA non-coding downstream 281346 12137461 ~ 12137772 (-)
G111690 NA non-coding downstream 338265 12080652 ~ 12080853 (-)
G111689 NA non-coding downstream 342111 12076453 ~ 12077007 (-)
G111788 NA non-coding upstream 15306 12437425 ~ 12439653 (-)
G111789 LOC107662667,LOC107752837,LOC107581613,LOC107581612 non-coding upstream 17667 12439786 ~ 12440874 (-)
G111791 NA non-coding upstream 19834 12441953 ~ 12442613 (-)
G111806 NA non-coding upstream 57315 12479434 ~ 12479788 (-)
G111807 si:ch211-257p13.3,LOC107752836,LOC107581541,LOC107685558,LOC107596636,LOC107673049,LOC107743172 non-coding upstream 58605 12480724 ~ 12480975 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 40669 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 551803 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 1007341 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 1032125 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 1132686 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1231941 13654060 ~ 13683909 (-)
G112478 NA other upstream 1812435 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2076144 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 2160360 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 2477063 14899182 ~ 14904907 (-)

Expression


Co-expression Network