LOC122360110 (LOC107723470,LOC107699447,LOC107657603,LOC107593661,LOC107581109)


Basic Information

Item Value
gene id LOC122360110
gene name LOC107723470,LOC107699447,LOC107657603,LOC107593661,LOC107581109
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16332427 ~ 16336832 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260451.1
CTTTTTTAGACATGCAGAGTTATAGACATGTTATAGCCACCTGTGCACAGATaagAGTCGTCAAGTCAGATGTCTTTATGGACCCTTTCTTTAAAAACTACACAAACACGAAAGACAAAACTCTCAAACACCACATACTAAATATCCAACAACTGGTTCAAGAAATATGCTGCGAAAACTGGAAATAGCTAAAAAAGATGTACAGACAAAGTGTCCTGTCAAATCTAGAGAAAAAGACACCAAAAAGCAAGAGGAAGAGGACAAAAACCTAAATGTTTGTGAAGCTTCCAGAGAATATCTAGATATATTGTCTACTGCCACAGCAAACGCACAAGTTTCAGACTCTCTTGGCTCAGAAATAGATGAAATAATTGACTCTCCGcctgtagagaaaaaaaacaaactgaaaaataaactgaagGAGTTAGAGAATGTTACACTTAACATTGCTATAACTGGGATGACAGGGGCAGGGAAGTCTTCCTTAGTCAATGCCCTCAGAGGCCTTCCCAATGATCATAAGGATGCAGCTCCCACAGGAACAACTGAGACTACCATGAAGCCCAACATGTACCCACATCCCTTCATGCCAAACGTGAAGATCTGGGACCTGCCTGGAATCGGTAGTCCAAGATTTAGAGCAAAGAAGTACCTGAAAGATGTTAATTTCCACACATATGACTTCTTTCTCATAGTGACCTCTGAAAGATTTAAGGAGAATGACATCGAGCTGGCCAGAGCGATCAAGAAGAGGAAgaaggtattttattttattcgtaCTAAAATTGACAACGACATTCGTGCAGAATTACACAAAACTAACTTTGATGAGCGGATGTTACTCGAAACCATCCGAGAGGATTGTACAGTGAACCTAGTGAGTATCGAAATACCCAAAATATTCTTAATCTCTTCCTTTCAAGTGGAAAATTATGACTTTCCGAAGCTGATCAACACCTTGGAATATGAAAttcccaaaaagaaaaaaattgctcTTATTCAGTTTTTGCCCGTTTAttcttttcagaaaaataaactgaaGGAGTTCGAGAATGTTACACTTAACATTGCTGTAACTGGGATGACAGGAGCAGGGAAGTCTTCCTTAGTCAATGCCCTCAGAGGCATTCTTAATGATGATAAGGACGCAGCTCCCACAGGAACTGAAACTACCATGAAGCCCAACATGTACCCACATCCCTTCATGCCAAACGTGAAGATCTGGGACCTGCCTGGAATCGGTAGTCCAAGATTTAGAGCAAAGAAGTACCTGAAAGATGTTAATTTCCACACATATGACTTCTTTCTCATAGTGACCTCTGAAAGATTTAAGGAGAATGACATCGAGCTGGCCAGAGCGATCAAGAAGAGCAAgaagcttttttatttcattcgcACAAAAATTGACAACGACATTCGTGCAGAATCAAACAAAAGAAACTTTGATGAGCGGATGTTGCTTGACAACATCAGAAAGGATTGTAAAGCAAATCTACTGAGTGTTGAAACACCCAAAATGTTCCTAGTGTCTTCATTTAATTtggaaaaatatgattttcagGAGCTGATCGACACCCTTGAAGAGGAACTTCCAGAGAACAAGAAATTTGCTCTCATTCAGTCTTTGCCCATTTATTCTCTAGAGGCCCTCACAAAGAAGAAAACATACTACAAGAAAATGATTTGGCTAAACGCCTTAGCAGCGGGAGTTGGGGCCATACCTCCAATCCCTGGATTGTCACTGGCCTGTGATTACGGCATCATGAAGAAGTTTTTTCAGCAAGTCTTCGCAGGTTTTGGTTTATCAAATCAGGCTCTAGAGGTGCTATCAGAACGAGTGAACAAACCGGTGGAGCAGCTAAAAGCCGCTAGGACTTCACGCTTCAAAGATGGGGCCACTGAGGATATTGTGATTGATATGCTGTCTAAACCAAAGATTGCTATAGCCAAGACTCTGGGGACTGTAATGTCTATGCTGCCAGGAGGAGCTCTACCTGCAGGAGGAACGGCCGTCGCTACTGTACACTACCTGCTTAATATGGGACTCAATGAGATGGCAGAAGACACCAAACGTGTTCTCTCTGTGTCACTGCTTGCCTAATAGACAGAAAAAGTAGCCTCAGATCCAGATGACAAATCATATAAATAACTGTGTTGAAGCAGAAAAAACGTGTTGtagtactaaaaaaaataatcataataattgtaatctttttttttgtgtgattatgattcaaataaaaaaacgaaaatgtgCTCATGAATGTGCGttcgaaataaaaaaaacagttttggttttcccaatgtaatgtatatttctataccaatgtttctttcatttatgtCTATATATAACTATGTTTGCTTAGGCCCATAACCACCTATGAGGTCAGCGAGGTCCGATCCTctgtaaatgtttcatgttcaacagaaataaaatttgttctctgaattaataatttgatgttTAACTCCTCATACATGTGCATGGCATGTATAATTCAGACAGTTTGAATCACTGTGAAGCGCTGGCAGAGTGAACAAGGCTTGAGAGAGGAGGCGCCGACGCAGTCTCCATGTTGCTAGATCTAGAtgttatatgctttttttgaaCTTCTCATTTTCACTTAATTTGAAAATTTAGAAAGTTAATCAAATAAGATATGGCAGTTTACGGTcagcaatatatttatatatttttaattgcaaaagttttttttttgtttttaacaaacatcTGCAGTGCAATTCTGTCTCTTCTAAAGTGTTTATAGTATGTAAAACAGGTTGTATTTATAGGGGTTATTATATCACGGTTTAAAGTACCCCTAGTATGCACTTTAGAAAATGTACCTCTCATGCAGTATGTAACACAGgtttaagtgaataaaaacattct
>XM_043260452.1
CTTTTTTAGACATGCAGAGTTATAGACATGTTATAGCCACCTGTGCACAGATaagAGTCGTCAAGTCAGATGTCTTTATGGACCCTTTCTTTAAAAACTACACAAACACGAAAGACAAAACTCTCAAACACCACATACTAAATATCCAACAACTGGTTCAAGAAATATGCTGCGAAAACTGGAAATAGCTAAAAAAGATGTACAGACAAAGTGTCCTGTCAAATCTAGAGAAAAAGACACCAAAAAGCAAGAGGAAGAGGACAAAAACCTAAATGTTTGTGAAGCTTCCAGAGAATATCTAGATATATTGTCTACTGCCACAGCAAACGCACAAGTTTCAGACTCTCTTGGCTCAGAAATAGATGAAATAATTGACTCTCCGcctgtagagaaaaaaaacaaactgaaaaataaactgaagGAGTTAGAGAATGTTACACTTAACATTGCTATAACTGGGATGACAGGGGCAGGGAAGTCTTCCTTAGTCAATGCCCTCAGAGGCCTTCCCAATGATCATAAGGATGCAGCTCCCACAGGAACAACTGAGACTACCATGAAGCCCAACATGTACCCACATCCCTTCATGCCAAACGTGAAGATCTGGGACCTGCCTGGAATCGGTAGTCCAAGATTTAGAGCAAAGAAGTACCTGAAAGATGTTAATTTCCACACATATGACTTCTTTCTCATAGTGACCTCTGAAAGATTTAAGGAGAATGACATCGAGCTGGCCAGAGCGATCAAGAAGAGGAAgaaggtattttattttattcgtaCTAAAATTGACAACGACATTCGTGCAGAATTACACAAAACTAACTTTGATGAGCGGATGTTACTCGAAACCATCCGAGAGGATTGTACAGTGAACCTAaaaaataaactgaaGGAGTTCGAGAATGTTACACTTAACATTGCTGTAACTGGGATGACAGGAGCAGGGAAGTCTTCCTTAGTCAATGCCCTCAGAGGCATTCTTAATGATGATAAGGACGCAGCTCCCACAGGAACTGAAACTACCATGAAGCCCAACATGTACCCACATCCCTTCATGCCAAACGTGAAGATCTGGGACCTGCCTGGAATCGGTAGTCCAAGATTTAGAGCAAAGAAGTACCTGAAAGATGTTAATTTCCACACATATGACTTCTTTCTCATAGTGACCTCTGAAAGATTTAAGGAGAATGACATCGAGCTGGCCAGAGCGATCAAGAAGAGCAAgaagcttttttatttcattcgcACAAAAATTGACAACGACATTCGTGCAGAATCAAACAAAAGAAACTTTGATGAGCGGATGTTGCTTGACAACATCAGAAAGGATTGTAAAGCAAATCTACTGAGTGTTGAAACACCCAAAATGTTCCTAGTGTCTTCATTTAATTtggaaaaatatgattttcagGAGCTGATCGACACCCTTGAAGAGGAACTTCCAGAGAACAAGAAATTTGCTCTCATTCAGTCTTTGCCCATTTATTCTCTAGAGGCCCTCACAAAGAAGAAAACATACTACAAGAAAATGATTTGGCTAAACGCCTTAGCAGCGGGAGTTGGGGCCATACCTCCAATCCCTGGATTGTCACTGGCCTGTGATTACGGCATCATGAAGAAGTTTTTTCAGCAAGTCTTCGCAGGTTTTGGTTTATCAAATCAGGCTCTAGAGGTGCTATCAGAACGAGTGAACAAACCGGTGGAGCAGCTAAAAGCCGCTAGGACTTCACGCTTCAAAGATGGGGCCACTGAGGATATTGTGATTGATATGCTGTCTAAACCAAAGATTGCTATAGCCAAGACTCTGGGGACTGTAATGTCTATGCTGCCAGGAGGAGCTCTACCTGCAGGAGGAACGGCCGTCGCTACTGTACACTACCTGCTTAATATGGGACTCAATGAGATGGCAGAAGACACCAAACGTGTTCTCTCTGTGTCACTGCTTGCCTAATAGACAGAAAAAGTAGCCTCAGATCCAGATGACAAATCATATAAATAACTGTGTTGAAGCAGAAAAAACGTGTTGtagtactaaaaaaaataatcataataattgtaatctttttttttgtgtgattatgattcaaataaaaaaacgaaaatgtgCTCATGAATGTGCGttcgaaataaaaaaaacagttttggttttcccaatgtaatgtatatttctataccaatgtttctttcatttatgtCTATATATAACTATGTTTGCTTAGGCCCATAACCACCTATGAGGTCAGCGAGGTCCGATCCTctgtaaatgtttcatgttcaacagaaataaaatttgttctctgaattaataatttgatgttTAACTCCTCATACATGTGCATGGCATGTATAATTCAGACAGTTTGAATCACTGTGAAGCGCTGGCAGAGTGAACAAGGCTTGAGAGAGGAGGCGCCGACGCAGTCTCCATGTTGCTAGATCTAGAtgttatatgctttttttgaaCTTCTCATTTTCACTTAATTTGAAAATTTAGAAAGTTAATCAAATAAGATATGGCAGTTTACGGTcagcaatatatttatatatttttaattgcaaaagttttttttttgtttttaacaaacatcTGCAGTGCAATTCTGTCTCTTCTAAAGTGTTTATAGTATGTAAAACAGGTTGTATTTATAGGGGTTATTATATCACGGTTTAAAGTACCCCTAGTATGCACTTTAGAAAATGTACCTCTCATGCAGTATGTAACACAGgtttaagtgaataaaaacattct

Function

NR:

description
PREDICTED: interferon-inducible GTPase 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260451.1 True 2899 mRNA 0.39 2 16332427 16336832
XM_043260452.1 False 2749 mRNA 0.39 3 16332427 16336832

Neighbor

gene id symbol gene type direction distance location
LOC122360309 LOC107699461,LOC107715144,LOC107596268 coding downstream 4472 16324175 ~ 16327955 (-)
irge4 LOC107657702,LOC107723472,LOC107593663 coding downstream 8639 16319159 ~ 16323788 (-)
bcl3 LOC107715119,LOC107596570,LOC107723427,LOC107593656 coding downstream 30645 16280887 ~ 16301782 (-)
ddx61 ddx61,LOC107699492,LOC107714973,LOC107657698,LOC107593657,LOC107595651,LOC107723428,LOC108428944,LOC103044136 coding downstream 52199 16273280 ~ 16280228 (-)
tomm40 LOC107723430,LOC107593658,LOC107657699,LOC107699493,LOC108438269,LOC107714943 coding downstream 59957 16267038 ~ 16272470 (-)
LOC122361092 LOC107723470,LOC107657603,LOC107699447,LOC107593661,LOC107581109 coding upstream 5678 16342510 ~ 16344956 (-)
tmem145 tmem145,LOC107706472,LOC107723540,LOC107657707,LOC107595744,LOC107593664 coding upstream 24084 16360916 ~ 16378010 (-)
lipeb LOC107706458,LOC107699484,LOC107595727,LOC107723485,LOC107657706,LOC107593665 coding upstream 44493 16381325 ~ 16402875 (-)
cd79a NA coding upstream 66137 16402969 ~ 16405653 (-)
arhgef1b arhgef1,LOC107706396,LOC107657708,LOC107723498,LOC107595767 coding upstream 70320 16407152 ~ 16439455 (-)
G113281 NA non-coding downstream 135750 16120326 ~ 16196677 (-)
G113280 jarid2a,LOC107593646,LOC107657689,LOC107714830,LOC107699452,LOC107595576 non-coding downstream 136531 16194029 ~ 16195896 (-)
G113300 NA non-coding downstream 139738 16190862 ~ 16192689 (-)
LOC122361072 LOC107723533,LOC107657692 non-coding downstream 264882 16066166 ~ 16067545 (-)
LOC122360541 NA non-coding downstream 346243 15984741 ~ 15986184 (-)
G113325 prss59.1,LOC107595716,LOC107739933,LOC107657703,LOC107735769,LOC107699485,LOC107593705,LOC101066992,LOC108431067,LOC102234122 non-coding upstream 15438 16352270 ~ 16357623 (-)
LOC122360769 NA non-coding upstream 151286 16488118 ~ 16494739 (-)
G113405 NA non-coding upstream 215776 16552608 ~ 16553858 (-)
G113433 NA non-coding upstream 251853 16588685 ~ 16589614 (-)
G113439 epb41l4b,LOC107706320,LOC107687806,LOC107596310 non-coding upstream 269882 16606714 ~ 16607680 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 92921 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 103961 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 191192 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 318676 16012964 ~ 16013751 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other downstream 325956 16001313 ~ 16006471 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other upstream 249252 16586084 ~ 16682178 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 1475538 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1858639 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 2020585 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 2155794 18492626 ~ 18520287 (-)

Expression


Co-expression Network