gnb3a (gnb3a,LOC107549492,LOC107672997,LOC108432288,LOC103042898,LOC102782474)


Basic Information

Item Value
gene id gnb3a
gene name gnb3a,LOC107549492,LOC107672997,LOC108432288,LOC103042898,LOC102782474
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13753414 ~ 13760343 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260505.1
aacaaattttAGGCAAAAGTCATTTGGTCATGAGCGCTCGGGAGAGACACAAAGATTCAATAAACAATTCAACAAAAAGAAATAGCCAACATTAATCTTCCTTCGCAAGtTTTCCCCCAGCAATTCTCTTGGCTCTACTGacctcacttcctgtctgtaTCTGTGGGTGAGCGTGCCTGACAACCGTTGCCATGGGTGAAATGGAGCAACTGCGAAAGGAGGCGGAGAGCCTGAAAGATGAGATTACTGCGGCTCGGAAAGCAGTGCAGGACCTCACGCTGCAGGATCACGTGGCGGGAACAGCTGTGGTGGGACGTGTGCAGCTAAAGACCAGAAAGACATTGAGAGGACATCTGTCCAAAATCTATGCTGTGCACTGGGGGACCGACTCTAAGCTGTGTGTCAGTGCATCTCAAGACGGTAAACTGATTGTATGGGACAGCTACACCACCAACAAGGTGCACGCAATCCCACTGAAGTCCTCGTGGGTGATGACATGTGCATACGCACCTTCAGGAAACATGGTGGCGTGCGGAGGACTGGACAACATGTGCTCCATCTACAACCTGAAGGGCAAAGACGGCAACGTGAAGGTCATGCGTGAGCTCGCAGCGCACACAGGTTACCTGTCCTGCTGCCGCTTCCTGAACGACAACGAGATCATCACCAGCTCCGGAGACTGTACCTGTGTTCTGTGGGACATTGAGACGGGATCTCAGAAGACGGTGTTCGCGGGTCACCTGGGTGACTGTATGTCTCTGGGTGTGGCCCCGGACTTCAACACTTTCATCTCAGGAGCCTGTGACTTCACGGCCAAACTGTGGGACATCCGTGACGGCCAGTGCAGACAGACCTTTGGAGGCCATGAGAGTGACATCAATGCCATAGGGTTTTTCCCCAATGGTAACGCAGTGATCACGGGTTCAGACGACGCTTCCTGCAAGCTCTACGACCTGCGTTCAGACCAGGAGCTCATCACGTACCAGGACTCGGGCATCATGTGCGGCGTGACCTCCATCGCTCCCTCCCTCTCCGGAAGACTCATCCTCGCTGGGTACGACGACTTCAACTGCAACATCTGGGACTCGCTGAAGGCGGAGAGAGTCGGGGTGTTGTCCGGTCATGACAACAGAGTGAGCTGTATCGGAGTGACACCTGATGGGATGGCCTGCTGCACAGGATCATGGGATAGTTTTCTGAAGATCTGGAACTAAGGCTCTGTCTCAAACGGAGGCATTTATAGAATATGTCAAGGACAGGGTAAAATGTAAAGGGGACTATTGAAACAGGACTATGGGATGTAGTTGTGTAAGTAGGGAGGGAAAGCGATATGTTTGTTGTGTTCCATCACGACGAGAAAGATTGTGAATAAGAAAACCTCATTTAGAGATGGGCTGACCTGTAGAATAATCTTGTCAAAGAAATCACGCAATACcagaaaacctgtttttcagggACTGCTAACTGCAAAAGCGGGCATTTACAAAGCCATTACCTATTTGGTGAATTGTGAGGTAATTTTTGGATAGGGTCTTTAACACAAGGGTGTCACAGCATATTATCAATAACAGCATATGAAATAAGACTTTCAACACTAGTTGAATTAAGCTAACTGATATCTAAATGCATCCTGTGCTATCAAACCTATATGACAGAGGTTGCCAAAATAGTTGTGCAAGTTCGAATATTATGACTTAAGTCTACACAGAAtgatattttcacttttataaaaTGTGGTTTACAAATTATAGATAGATTAAACGAGTTTTAGTGAGACTGTCTGATTGATGCttctttttattaagtttagtgttagatttttttttttgtgcactgaTAGTGAATCTGTTTTTTCTGCTTACTCgggccaataaaaaaaatatgataaactTGCC
>XM_043260506.1
attttAGGCAAAAGTCATTTGGTCATGAGCGCTCGGGAGAGACACAAAGATTCAATAAACAATTCAACAAAAAGAAATAGCCAACATTAATCTTCCTTCGCAAGcagtTTTCCCCCAGCAATTCTCTTGGCTCTACTGacctcacttcctgtctgtaTCTGTGGGTGAGCGTGCCTGACAACCGTTGCCATGGGTGAAATGGAGCAACTGCGAAAGGAGGCGGAGAGCCTGAAAGATGAGATTACTGCGGCTCGGAAAGCAGTGCAGGACCTCACGCTGCAGGATCACGTGGCGGGAACAGCTGTGGTGGGACGTGTGCAGCTAAAGACCAGAAAGACATTGAGAGGACATCTGTCCAAAATCTATGCTGTGCACTGGGGGACCGACTCTAAGCTGTGTGTCAGTGCATCTCAAGACGGTAAACTGATTGTATGGGACAGCTACACCACCAACAAGGTGCACGCAATCCCACTGAAGTCCTCGTGGGTGATGACATGTGCATACGCACCTTCAGGAAACATGGTGGCGTGCGGAGGACTGGACAACATGTGCTCCATCTACAACCTGAAGGGCAAAGACGGCAACGTGAAGGTCATGCGTGAGCTCGCAGCGCACACAGGTTACCTGTCCTGCTGCCGCTTCCTGAACGACAACGAGATCATCACCAGCTCCGGAGACTGTACCTGTGTTCTGTGGGACATTGAGACGGGATCTCAGAAGACGGTGTTCGCGGGTCACCTGGGTGACTGTATGTCTCTGGGTGTGGCCCCGGACTTCAACACTTTCATCTCAGGAGCCTGTGACTTCACGGCCAAACTGTGGGACATCCGTGACGGCCAGTGCAGACAGACCTTTGGAGGCCATGAGAGTGACATCAATGCCATAGGGTTTTTCCCCAATGGTAACGCAGTGATCACGGGTTCAGACGACGCTTCCTGCAAGCTCTACGACCTGCGTTCAGACCAGGAGCTCATCACGTACCAGGACTCGGGCATCATGTGCGGCGTGACCTCCATCGCTCCCTCCCTCTCCGGAAGACTCATCCTCGCTGGGTACGACGACTTCAACTGCAACATCTGGGACTCGCTGAAGGCGGAGAGAGTCGGGGTGTTGTCCGGTCATGACAACAGAGTGAGCTGTATCGGAGTGACACCTGATGGGATGGCCTGCTGCACAGGATCATGGGATAGTTTTCTGAAGATCTGGAACTAAGGCTCTGTCTCAAACGGAGGCATTTATAGAATATGTCAAGGACAGGGTAAAATGTAAAGGGGACTATTGAAACAGGACTATGGGATGTAGTTGTGTAAGTAGGGAGGGAAAGCGATATGTTTGTTGTGTTCCATCACGACGAGAAAGATTGTGAATAAGAAAACCTCATTTAGAGATGGGCTGACCTGTAGAATAATCTTGTCAAAGAAATCACGCAATACcagaaaacctgtttttcagggACTGCTAACTGCAAAAGCGGGCATTTACAAAGCCATTACCTATTTGGTGAATTGTGAGGTAATTTTTGGATAGGGTCTTTAACACAAGGGTGTCACAGCATATTATCAATAACAGCATATGAAATAAGACTTTCAACACTAGTTGAATTAAGCTAACTGATATCTAAATGCATCCTGTGCTATCAAACCTATATGACAGAGGTTGCCAAAATAGTTGTGCAAGTTCGAATATTATGACTTAAGTCTACACAGAAtgatattttcacttttataaaaTGTGGTTTACAAATTATAGATAGATTAAACGAGTTTTAGTGAGACTGTCTGATTGATGCttctttttattaagtttagtgttagatttttttttttgtgcactgaTAGTGAATCTGTTTTTTCTGCTTACTCgggccaataaaaaaaatatgataaactTGCC
>XM_043260507.1
CCCATCCACACCCTTTgctctctcgctttctcctttcaaacaaattttAGGCAAAAGTCATTTGGTCATGAGCGCTCGGGAGAGACACAAAGATTCAATAAACAATTCAACAAAAAGAAATAGCCAACATTAATCTTCCTTCGCAAGCAATTCTCTTGGCTCTACTGacctcacttcctgtctgtaTCTGTGGGTGAGCGTGCCTGACAACCGTTGCCATGGGTGAAATGGAGCAACTGCGAAAGGAGGCGGAGAGCCTGAAAGATGAGATTACTGCGGCTCGGAAAGCAGTGCAGGACCTCACGCTGCAGGATCACGTGGCGGGAACAGCTGTGGTGGGACGTGTGCAGCTAAAGACCAGAAAGACATTGAGAGGACATCTGTCCAAAATCTATGCTGTGCACTGGGGGACCGACTCTAAGCTGTGTGTCAGTGCATCTCAAGACGGTAAACTGATTGTATGGGACAGCTACACCACCAACAAGGTGCACGCAATCCCACTGAAGTCCTCGTGGGTGATGACATGTGCATACGCACCTTCAGGAAACATGGTGGCGTGCGGAGGACTGGACAACATGTGCTCCATCTACAACCTGAAGGGCAAAGACGGCAACGTGAAGGTCATGCGTGAGCTCGCAGCGCACACAGGTTACCTGTCCTGCTGCCGCTTCCTGAACGACAACGAGATCATCACCAGCTCCGGAGACTGTACCTGTGTTCTGTGGGACATTGAGACGGGATCTCAGAAGACGGTGTTCGCGGGTCACCTGGGTGACTGTATGTCTCTGGGTGTGGCCCCGGACTTCAACACTTTCATCTCAGGAGCCTGTGACTTCACGGCCAAACTGTGGGACATCCGTGACGGCCAGTGCAGACAGACCTTTGGAGGCCATGAGAGTGACATCAATGCCATAGGGTTTTTCCCCAATGGTAACGCAGTGATCACGGGTTCAGACGACGCTTCCTGCAAGCTCTACGACCTGCGTTCAGACCAGGAGCTCATCACGTACCAGGACTCGGGCATCATGTGCGGCGTGACCTCCATCGCTCCCTCCCTCTCCGGAAGACTCATCCTCGCTGGGTACGACGACTTCAACTGCAACATCTGGGACTCGCTGAAGGCGGAGAGAGTCGGGGTGTTGTCCGGTCATGACAACAGAGTGAGCTGTATCGGAGTGACACCTGATGGGATGGCCTGCTGCACAGGATCATGGGATAGTTTTCTGAAGATCTGGAACTAAGGCTCTGTCTCAAACGGAGGCATTTATAGAATATGTCAAGGACAGGGTAAAATGTAAAGGGGACTATTGAAACAGGACTATGGGATGTAGTTGTGTAAGTAGGGAGGGAAAGCGATATGTTTGTTGTGTTCCATCACGACGAGAAAGATTGTGAATAAGAAAACCTCATTTAGAGATGGGCTGACCTGTAGAATAATCTTGTCAAAGAAATCACGCAATACcagaaaacctgtttttcagggACTGCTAACTGCAAAAGCGGGCATTTACAAAGCCATTACCTATTTGGTGAATTGTGAGGTAATTTTTGGATAGGGTCTTTAACACAAGGGTGTCACAGCATATTATCAATAACAGCATATGAAATAAGACTTTCAACACTAGTTGAATTAAGCTAACTGATATCTAAATGCATCCTGTGCTATCAAACCTATATGACAGAGGTTGCCAAAATAGTTGTGCAAGTTCGAATATTATGACTTAAGTCTACACAGAAtgatattttcacttttataaaaTGTGGTTTACAAATTATAGATAGATTAAACGAGTTTTAGTGAGACTGTCTGATTGATGCttctttttattaagtttagtgttagatttttttttttgtgcactgaTAGTGAATCTGTTTTTTCTGCTTACTCgggccaataaaaaaaatatgataaactTGCC
>XM_043260508.1
gggatcaGAAGGTGCGTAAAGCAGAAAACCTGAATGAACGTCGTCCCGAGAAAAAGGCAAGTGGATAGAGAGTTGAAAAGGAGTAAGAGATACAAACAGAGCGGAGAAACATCCCAGAGGAACAGtTTTCCCCCAGCAATTCTCTTGGCTCTACTGacctcacttcctgtctgtaTCTGTGGGTGAGCGTGCCTGACAACCGTTGCCATGGGTGAAATGGAGCAACTGCGAAAGGAGGCGGAGAGCCTGAAAGATGAGATTACTGCGGCTCGGAAAGCAGTGCAGGACCTCACGCTGCAGGATCACGTGGCGGGAACAGCTGTGGTGGGACGTGTGCAGCTAAAGACCAGAAAGACATTGAGAGGACATCTGTCCAAAATCTATGCTGTGCACTGGGGGACCGACTCTAAGCTGTGTGTCAGTGCATCTCAAGACGGTAAACTGATTGTATGGGACAGCTACACCACCAACAAGGTGCACGCAATCCCACTGAAGTCCTCGTGGGTGATGACATGTGCATACGCACCTTCAGGAAACATGGTGGCGTGCGGAGGACTGGACAACATGTGCTCCATCTACAACCTGAAGGGCAAAGACGGCAACGTGAAGGTCATGCGTGAGCTCGCAGCGCACACAGGTTACCTGTCCTGCTGCCGCTTCCTGAACGACAACGAGATCATCACCAGCTCCGGAGACTGTACCTGTGTTCTGTGGGACATTGAGACGGGATCTCAGAAGACGGTGTTCGCGGGTCACCTGGGTGACTGTATGTCTCTGGGTGTGGCCCCGGACTTCAACACTTTCATCTCAGGAGCCTGTGACTTCACGGCCAAACTGTGGGACATCCGTGACGGCCAGTGCAGACAGACCTTTGGAGGCCATGAGAGTGACATCAATGCCATAGGGTTTTTCCCCAATGGTAACGCAGTGATCACGGGTTCAGACGACGCTTCCTGCAAGCTCTACGACCTGCGTTCAGACCAGGAGCTCATCACGTACCAGGACTCGGGCATCATGTGCGGCGTGACCTCCATCGCTCCCTCCCTCTCCGGAAGACTCATCCTCGCTGGGTACGACGACTTCAACTGCAACATCTGGGACTCGCTGAAGGCGGAGAGAGTCGGGGTGTTGTCCGGTCATGACAACAGAGTGAGCTGTATCGGAGTGACACCTGATGGGATGGCCTGCTGCACAGGATCATGGGATAGTTTTCTGAAGATCTGGAACTAAGGCTCTGTCTCAAACGGAGGCATTTATAGAATATGTCAAGGACAGGGTAAAATGTAAAGGGGACTATTGAAACAGGACTATGGGATGTAGTTGTGTAAGTAGGGAGGGAAAGCGATATGTTTGTTGTGTTCCATCACGACGAGAAAGATTGTGAATAAGAAAACCTCATTTAGAGATGGGCTGACCTGTAGAATAATCTTGTCAAAGAAATCACGCAATACcagaaaacctgtttttcagggACTGCTAACTGCAAAAGCGGGCATTTACAAAGCCATTACCTATTTGGTGAATTGTGAGGTAATTTTTGGATAGGGTCTTTAACACAAGGGTGTCACAGCATATTATCAATAACAGCATATGAAATAAGACTTTCAACACTAGTTGAATTAAGCTAACTGATATCTAAATGCATCCTGTGCTATCAAACCTATATGACAGAGGTTGCCAAAATAGTTGTGCAAGTTCGAATATTATGACTTAAGTCTACACAGAAtgatattttcacttttataaaaTGTGGTTTACAAATTATAGATAGATTAAACGAGTTTTAGTGAGACTGTCTGATTGATGCttctttttattaagtttagtgttagatttttttttttgtgcactgaTAGTGAATCTGTTTTTTCTGCTTACTCgggccaataaaaaaaatatgataaactTGCC

Function

symbol description
gnb3a Predicted to enable signaling receptor complex adaptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be part of heterotrimeric G-protein complex. Predicted to be active in cytoplasm. Is expressed in nervous system. Human ortholog(s) of this gene implicated in artery disease (multiple); congenital stationary night blindness 1H; familial hyperlipidemia; mental depression; and type 2 diabetes mellitus. Orthologous to human GNB3 (G protein subunit beta 3).

NR:

description
PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like isoform X1

GO: NA

KEGG:

id description
K04536 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260505.1 False 1895 mRNA 0.47 9 13753414 13759272
XM_043260506.1 False 1893 mRNA 0.47 9 13753414 13759267
XM_043260507.1 True 1922 mRNA 0.47 9 13753414 13759310
XM_043260508.1 False 1911 mRNA 0.47 9 13753414 13760343

Neighbor

gene id symbol gene type direction distance location
tpi1b tpi1,tpi1b,LOC107672981,LOC107724698,LOC107700200,LOC107744284 coding downstream 51671 13694759 ~ 13701743 (-)
si:dkey-26c10.5 LOC107549484,LOC107724725,LOC107700203,LOC107672979 coding downstream 75156 13673756 ~ 13678258 (-)
rasip1 rasip1,LOC107549479,LOC107724795,LOC107744292,LOC107598383 coding downstream 148673 13592032 ~ 13604741 (-)
il11a NA coding downstream 179819 13565402 ~ 13573595 (-)
znf628 LOC107724809,LOC107549478,LOC107744293,LOC107598382,LOC107672962,LOC107692578 coding downstream 189187 13556250 ~ 13564227 (-)
p3h3 p3h3,LOC107700158,LOC107724912 coding upstream 3661 13764004 ~ 13770786 (-)
cxcr3.3 NA coding upstream 75177 13835520 ~ 13838704 (-)
cxcr3.2 LOC107700152,LOC107551671,LOC107717417,LOC107598452,LOC107671173,LOC107755594 coding upstream 80965 13841308 ~ 13844368 (-)
ceacam1 NA coding upstream 106037 13866380 ~ 13875529 (-)
LOC122360471 LOC107707784,LOC107580961 coding upstream 120815 13881158 ~ 13887518 (-)
G112385 NA non-coding downstream 17183 13648627 ~ 13736231 (-)
G112410 clstn3,LOC107744281,LOC107724674,LOC107700197,LOC102784285 non-coding downstream 19266 13733188 ~ 13734148 (-)
G112363 leng8,LOC107724921,LOC107700201,LOC107744285,LOC107672965,LOC107549486,LOC107598384 non-coding downstream 59451 13688506 ~ 13693963 (-)
G112390 NA non-coding downstream 93944 13659005 ~ 13659470 (-)
G112377 NA non-coding downstream 134078 13618687 ~ 13619336 (-)
G112369 NA non-coding upstream 16926 13777269 ~ 13778805 (-)
G112426 NA non-coding upstream 24672 13785015 ~ 13786453 (-)
G112447 NA non-coding upstream 140521 13900864 ~ 13901076 (-)
G112448 NA non-coding upstream 140794 13901137 ~ 13901613 (-)
G112449 NA non-coding upstream 148981 13909324 ~ 13909736 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other downstream 69505 13654060 ~ 13683909 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 1374965 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1886099 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 2341637 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 2366421 11333175 ~ 11386993 (-)
G112478 NA other upstream 474211 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 737920 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 822136 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1138839 14899182 ~ 14904907 (-)
LOC122359907 LOC107594909 other upstream 1148277 14908620 ~ 14913646 (-)

Expression


Co-expression Network