kpna5 (kpna5,LOC107704934,LOC107716841,LOC107552832,LOC107711738)


Basic Information

Item Value
gene id kpna5
gene name kpna5,LOC107704934,LOC107716841,LOC107552832,LOC107711738
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23339451 ~ 23348014 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260512.1
CGGAGGTGACGTACCTTACCAGTGTACGCCATATTGCCCTCAGCTGGAGGAACTCGGGAGGGTCTTGAgagaaatttaaaaacacacggCCAGTACATCCCTCTCCGGTCTACGACTAATGGACGCAATGGCAAGCCCAGGCAAAGAAAGCTATCGAATGAAGAGCTACAAGAATAAAGCCCTGAACCCCCAGGAAATGCGGAGACGGAGAGAGGAGGAAGGGATACAGCTCCGTAAACAGAAGAGGGAGGAGCAGTTGTTCAAGAGGAGGAATGTGTCTCTGCCACCTGGTGATGAGTCCATGCTCGAATGCCCCATTCAGGACCCTGATATCAGCTCCACTGTACCTGTATCAGGTGAAAGCGTTATAACCCAAGACATGATTCAAATGATCTTCTCTGaggatccagaccagcagcTCATAGCCACTCAAAAGTTCAGAAAGTTACTCTCTAAAGAGCCCAATCCTCCCATTGATGAGGTCATCCACACATCTGGTGTTGTCAACCGGTTTGTTGAATTCTTAAAAAGGAGTGATAACTGGACTCTGCAGTTTGAAGCTGCCTGGGCCCTGACCAACATAGCCTCAGGAACCTTCCTACACACCAAGGTGGTAATTGAGACGGGGGCCGTGCCCATCTTTATAGAGCTACTCAACTCAGACTATGAGGATGTACAAGAGCAGgCGGTGTGGGCATTAGGAAATATAGCTGGGGATAATGCAGAGTGCAGAGACTACGTCCTCAACTGTGGCATCTTGCCTTCTCTTCAGCAGTTGCTTGCAAAATCAAACCGTCTCACTACCACCCGGAATGCTGTGTGGGCGCTGTCTAACCTGTGCAGAGGGAAAAATCCACCTCCAGACTTTGCAAAGGTGTCACCATGTCTGAGCGTGCTTTCCAGATTGCTCTTCAGCAGTGATCCTGATGTTCTTGCAGATGCCTGTTGGGCACTTTCATACCTGTCTGATGGACCCAATGACAAAATCCAGACAGTTATTGACTCAGGAGTATGCCGCAGGCTGGTGGAGTTGCTCATGCACAGCGATTACAAGGTGGTGTCCCCTGCACTAAGAGCAGTGGGGAACATTGTAACAGGAGACGATATTCAGACCCAGGTGATTCTGAACTGCTCCGCTCTACCCTGCCTGCTCCATTTACTCAGCAGTCCAAAGGAGTCCATCAAAAAAGAGGCCTGCTGGACTGTCTCCAATATCACAGCTGGGAACAGAGCGCAAATCCAGGCCGTTATTGATGGCAACATATTCCCGGTGTTAATCGAAATACTGCAGAAAGCTGAGTTCCGCACCAGGAAGGAGGCCGCGTGGGCAATAACCAACGCCACCTCGGGAGGCACGCCAGAGCAGATTAGATACTTGGTGTCTCTCAACACCATAAAGCCCATGTGTGACCTGCTGACGGTGATGGACTCTAAGATTGTGCAGGTGGCTCTGAATGGCCTGGAGAACATCCTCAGACTGGGAGAACAAGAGTCCAAACAGAACGGAACAGGCATCAATCCTTACTGTGCTCTCATCGAAGAGGCTTATGGCTTGGACAAGATTGAGTTCCTGCAGAGCCACGAGAACCAGGAAATCTACCAGAAGGCCTTTGACCTGATCGAGCACTACTTTGGCGTGGAGGAAGAGGACGCCAGCATCGTCCCGCAGGTGGATCAGAATCAGGGCCAGTACATTTTCCAGCAGTCTGAGGGACCGATGGAAGGCTTCCAGCTCTAACCTGTATCCCTGTCCTACTGGCCAAGCTTCAGGCCTTGCTTCCTCCATCCTGCCTGGAGTCTTCTCTCCCTCCATCTCCGCAGCGCAGGACCTCAGCTCCAGCCTCGCTTCAAGACACAGAGGCCCGTACCTGCTCCTCACAGCAGAGATGACATGCCTGCGCCCGCCGCCTAACCCCCCATCCCCCATCAAATCCAACCCACTAAATCTTCCATTTCCATCCTGCCCATATTCCAAGCTCCGTTTATCGAGAGAGAAAATCTGTTAGATGGACCGAGGAGGGCAAAGCTCAGAGTCTGTAGTTTAAGTCCTCTTGAGACTTACAAAAAGCATTTTGCTTTCATTGTTGTTaatgttattatgattattagaCATTGGCACTGGTGTTCTGTAAAGTAAACTTTACTCCATATCCCTTGAGAAATGTGAAACTACCTCTTCAATCAGAAAACGAAGTGTGCGACAAACACCCAGCCTTTAGCTCTGACAGTTCTCTTCTCTTGTGAAGTAAATGCTTCTATGCAAACATGTATCGTGGCAGAAATAACACGGCCAGACAAAGTAACTAATGTATTTGCATTGATACATTTGCATTGGATGAATTCCCTGACTCTGTGTGGCAGCGCACAACAGTTTGTCATGCCATATTTGTCCACAATGCATCCTGAGGGCATGTCAAGCCCAGTTACACTATTTATTCTGACATTTTGTTAACTAGCACAGCAAACTGCTGACCTGGGAGATTTAAAGTCgtatttattgtgctttttagaAGGAACCGGTCTGTGGGGTCCCGGCTGTTTAGAGAGTAGCGCACAGCCCGCTTCCTCTCAGCCCTCGCTTTGCTGATGCTCTCGAAGCATTACGAGCGCTGCATGCAATTATTTAAGTGTGGTCACGCGATCACCAAGATGgagttgtttgtgtgtatgcatatcATTGGGTTGTTTCTCATCTCACTCGGAAGGTGTGTCTTTTTTTGCGCTGACTagctttaatttgatttatttaatgttcaCAAGGTAGAAAGTGTTGAGATTtagtaaaatgtgtatattatatatacattgagGGTAGAAGGAGGATGCTTTTCAGTGAAATGGTCTTGGTGTGCAGTGAAATACTAACGTAAAGGAAAGTATCTTTCATAACATTCTTCATTCAAAGAGCTTTTCCTCATATGGTCCCTACTAGTGCTAAAATTTCCTCCTGTGTTATAATTCTTGTAATGATatatcctctttttttttttttttttttttttttttttttttttttcaaatgaacttACTTGCAGGAGATTGCCTTAGTCATGAAACTTGTCTGGCAGAAAGTTCTTCTCAGTTTTCAGTTGTTTGTGTGATTATTTACTTCCTCTTTACGTTCTGCCCGTAAACGACTTGCAcccatttttctttgaaacaagCTTGATTGATCCAAATAAGAGTTATAATAATGGAAAGTcagtatatttacaaaaaaaaaaaaatcattaagattGTAAAATTAAACTTTATCAAGCACATTCGATTGTGTATAGTTTTGTAAAAATTCTCATGTTTGTACAATGTTTTCtaagtttgggtttttttcgcatcagaaaaaaaaaaacatctgtgtttTAAGTTATCATTGGTACAAACCTACAGTACAGAGGAGATCATTGCTTTCCTCGAAGACAAATGTTGATATTGTGTGAAATGATGTAgacaaataaacagacaaataaaatgttctgttaCACATTGAAA

Function

symbol description
kpna5 Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in NLS-bearing protein import into nucleus. Predicted to act upstream of or within protein import into nucleus. Predicted to be located in cytoplasm. Predicted to be active in nucleoplasm. Orthologous to human KPNA5 (karyopherin subunit alpha 5).

NR:

description
PREDICTED: importin subunit alpha-6 isoform X2

GO:

id name namespace
GO:0006606 protein import into nucleus biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K15042 KPNA5_6; importin subunit alpha-6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260512.1 True 3489 mRNA 0.45 14 23339451 23348014

Neighbor

gene id symbol gene type direction distance location
cnot3a cnot3a,LOC107711735,LOC107587779,LOC107700763,LOC107552836,LOC107704926 coding downstream 24690 23306694 ~ 23314761 (-)
LOC122359881 LOC107716830,LOC107587785,LOC107682987 coding downstream 72979 23264286 ~ 23266472 (-)
LOC122360080 NA coding downstream 77497 23258003 ~ 23261954 (-)
LOC122359973 LOC107672119,LOC107552844,LOC107704924,LOC107716832 coding downstream 84875 23251560 ~ 23254576 (-)
styk1b LOC107587900,LOC107714598,LOC107724775,LOC107704922,LOC107672192,LOC107552846 coding downstream 89654 23244256 ~ 23249797 (-)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695,LOC107552826 coding upstream 10459 23358473 ~ 23361374 (-)
calhm5.1 LOC107704861,LOC107716815,LOC107587898,LOC107711741,LOC107552825 coding upstream 14323 23362337 ~ 23367373 (-)
calhm6 fam26f,LOC107700692,LOC107552824,LOC107716816 coding upstream 19487 23367501 ~ 23368953 (-)
mms22l mms22l,LOC107716844,LOC107587771,LOC107711743,LOC107552829,LOC107700675 coding upstream 41409 23389423 ~ 23403630 (-)
fbxl4 fbxl4,LOC107587770,LOC107716847,LOC107704940,LOC107711744,LOC107552823,LOC107700759 coding upstream 179074 23527088 ~ 23536822 (-)
G115669 NA non-coding downstream 11558 23326208 ~ 23327893 (-)
G115631 NA non-coding downstream 149801 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 171511 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 261581 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 266001 23072259 ~ 23073450 (-)
G115910 NA non-coding upstream 467883 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 468886 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 472505 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 696746 24044760 ~ 24057262 (-)
G115939 NA non-coding upstream 729617 24077631 ~ 24077867 (-)
G115554 NA other downstream 405484 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 438264 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1250359 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1370916 21964855 ~ 21968535 (-)
G115149 NA other downstream 1535647 21801475 ~ 21803804 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 171794 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 234979 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 320051 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 969468 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 1016626 24364640 ~ 24369566 (-)

Expression


Co-expression Network