gba (gba,LOC107743191,LOC107685577,LOC107673025,LOC107707168,LOC107598431,LOC107596705,LOC107598447)


Basic Information

Item Value
gene id gba
gene name gba,LOC107743191,LOC107685577,LOC107673025,LOC107707168,LOC107598431,LOC107596705,LOC107598447
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13055397 ~ 13060927 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260518.1
CTCGGTCGCATGGTGCGTGGTTTACTGGTGACAGTGAAGAAAATATGCCGAAGATTAAACGCTTGTTTAAGTTTACATTTAGAGGACGTTAGTGATATTAGTAGTTACGTTAAACACACAAGCGTTTGTCAACTGGGAAGAAGTAGCGGGAGCGCGTTTAGTATTTGAGTGTTGATATTGCGAAGAATCTCCAGAGCGTCTCACCGACAGAATGAGGGAAACGCTTCTTCTTGTTCTGCTGGCTGAAGTAATCACTATAGCAACAGCTGATGACTGTCGAGCGCTGAATTTCGGTCATGGctcggttgtgtgtgtgtgcaatgcgACATACTGCGACTCGGTGGGCCAGGCTGGGCTGCCAGACCCCGGACAGTTCTTGTCATATGTCAGCAATAAAGCTGGCAGCAGACTCGTGAAGAGTCGAGGCCAGTTCCAGAAGAACGGCACAACGGCAGCTCTCAGAATCACTCTGAATCCCAGTCAGAAGTATCAGCGCATTAAAGGATTCGGGGGAGCCATGACAGATGCAGCAGCTATGAATATTCTGTCCCTGTCCTCTGGAGCTCAGGACCAGCTGCTCAGACAGTATTTCTCCCCAGATGGCATAGAGTACCGTTTCGTGAGAGTGCCGATGGCCAGCTGTGATTTCTCAACTCGCCTCTACACATACGCTGACACCCCAGAAGACTACGACCTCCAGAACTTCACTCTGGCTGAAGAGGATATTCACATGAAGATTCCCCTGCTGCAGCGGGCACAGGCTCTCTCTGCTCAGCCTCTCAATCTGTTCGCCAGTGCCTGGAGCGCCCCCGCATGGCTGAAGACCAACGGTGCTCTGATTGGCAAAGGCTCCCTCAAAGGCAAGCCAGGAGGCAAAGAGTATAAGACCTGGGCCCAGTACTACATTAGATTCCTAGAGGAATATGGGAAATATAATCTTTCTTTCTGGGGGCTGACATCTGGAAATGAGCCCACTGCAGGCGAAATGACAAATTACAGCTTTCAGGCGTTGGGCTTTACTCCGGAGACACAGCGCGACTGGATCGCCCTGGATCTGGGTCCAGGACTCCATTCATCATCCTTTCCCCAGACCCGCCTTGTGATCCTCGATGACAACCGACTTCTGCTTCCACACTGGGCCAAAGTGGTTCTGAGTGACGTACAAGCGGCACGTTATGTCCACGGGATTGGTTTTCACTGGTATCTGAACAACATTGCGCCGCCTGACGTCACCCTGACAACCACGCACCATATCTACCCAGAGTACTTCCTGTTTGCAACCGAGGCTTGTGCTGGGTGGAGTCCACTGGACCGGGGGGTGCGCCTGGGCAGCTGGGACAGAGCAGAAGACTATGCACATGACATCATAGAGGACCTGAATAACTATGTGACCGGCTGGACAGACTGGAACTTGGCCCTTAATCAGGATGGAGGACCAAATTGGGTCAAAAACTTTGTGGATAGCCCTATTATAGTGGACTCAAGTAAAGACGTCTTCTACAAGCAGCCCACCTTCTACAGCATGGCCCACTTCAGCAAGTTCCTGTGGGAGGGGTCACAGAGAGTGGGCGTGTCCTTCAGTCAGCATACCAGCCTGAAAATTTCTGCCTATATCAGACCGGATGCCTCAGCCGTTCTGATCATTCTCAACAGGTCTGAAGAAGAGGTGCAGTTTGAAGTTTGGGATCAAACGCTGGGCTTTCTGCCAGGAAGTGCTCCACCTCACTCCATCCTCACACTACTGTGGAGCAGACGCTGAAAGGCTCTAGCAAACGCTGCGTCGATGAGCCACATATGCACCTTAATGAATAACTCAAATCATTTCTGTAAAGCTTTGAGACAGTAACATTTCAAGCAACCACGATTGCAAAATCAGATACTTAATCTACCCATTTTGCTTAAGTTGTTTTGATGGATGGCAGTCAAAAGAAGATTTAAGGGACAATTATCAATTTTAAAGGCAATAAAAAGAACGATCGAGTCATGTTTTAGCAAGTAATGCTGATATTCCTGGAAAAACTTGATGTATAAAATTCCTTGCACTGAACACACTAAGAATTAAAAAGATGCAATAAACTTCTCACAGCCATCTCTTCTGAGAATGCATATTTATGTCAACAAAAATCAAATAGGAAGATCTGAATGCATTTGTTGTATCATAAGATCAACATGTTgccttgtttttattcagttttattattaatacatcatGGTCATACacatcatataatatatatttatatactttaatatttagcaaTTCATCGTCATTttcatcaatgttttttttgtcttccttAAATGAGTTTTCcaactaaaattatttacattagaaGAAACTGTAATAGAAATGAGAgtgaaaagaacaaaatcaaattaaactgAATGACATTGACGGGTCTGTGATATATACACACCAGAGTTGGAAtcaaaaaggagagagagagacaaaactTCATGATCTCCTGGACAAAAGGGATGTGAGAACAACGAAAGTAAAGCAACGTTCATAAACCGCAAAGACACGGCACCCCATCCCAATGAGAATTCACATTGAACGATAAGAGGCGGGGAGTACAGCTCGTCTCTGGGAAACCCAGCGCTGTACCATCTAAATGTGGGTTGGGAGTTGTGCTGCTACAGCAACAATATGTGCCCCGACCCTACCCTCATCCTGCGCTGTTTGTTCACTCGGGGGAAGGAAAAACTCTGGAGGAGATCAAAAGACATTCACATAGACACAACTGAGAGGGACGGTGTTAGAGAACAGAAGTAAACAAACCATAGTAAAAGTACGCCAGCATGGTGGgatgaacacaaa

Function

symbol description
gba Enables glucosylceramidase activity. Acts upstream of or within neuron cellular homeostasis; regulation of ossification; and swimming. Predicted to be located in lysosomal membrane. Is expressed in brain; fin; and liver. Used to study Gaucher's disease. Human ortholog(s) of this gene implicated in Gaucher's disease (multiple); Lewy body dementia; Parkinson's disease (multiple); and Parkinsonism. Orthologous to human GBA (glucosylceramidase beta).

NR:

description
glucosylceramidase isoform X1

GO: NA

KEGG:

id description
K01201 GBA, srfJ; glucosylceramidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260518.1 True 2821 mRNA 0.46 10 13055397 13060927

Neighbor

gene id symbol gene type direction distance location
polr3c polr3c,LOC107685575,LOC107743190,LOC107673034,LOC107707173 coding downstream 6994 13042826 ~ 13048403 (-)
deptor deptor,LOC107685573,LOC107673035,LOC107596624,LOC107743215 coding downstream 79603 12947950 ~ 12975794 (-)
col14a1a col14a1a,LOC107685600,LOC107707159,LOC107672958 coding downstream 111327 12839061 ~ 12944070 (-)
LOC122361014 mtbp,LOC107596625,LOC107685571,LOC107707175,LOC107673040 coding downstream 229836 12806228 ~ 12825561 (-)
setd2 LOC107743179,LOC107685560,LOC107752833,LOC107673014,LOC107581536,LOC107596709 coding downstream 455403 12577861 ~ 12599994 (-)
dap3 dap3,LOC107685621,LOC107743192,LOC107707170,LOC107598433,LOC107673026 coding upstream 108 13061035 ~ 13066879 (-)
rusc1 rusc1,LOC107743195,LOC107692542,LOC107596619,LOC107707166,LOC107598429 coding upstream 39931 13100858 ~ 13116095 (-)
fdps fdps,LOC107673012,LOC107692580 coding upstream 55550 13116477 ~ 13119873 (-)
LOC122359944 NA coding upstream 59939 13120866 ~ 13123887 (-)
LOC122359945 NA coding upstream 63421 13124348 ~ 13126202 (-)
G112229 NA non-coding downstream 29268 13024933 ~ 13026129 (-)
G111862 NA non-coding downstream 402991 12567205 ~ 12652406 (-)
G111860 NA non-coding downstream 443403 12557811 ~ 12611994 (-)
G111799 NA non-coding downstream 565277 12489782 ~ 12490120 (-)
G111809 NA non-coding downstream 567704 12486851 ~ 12487693 (-)
G112256 LOC107737914,LOC107549458,LOC107598419,LOC107673038,LOC107750018 non-coding upstream 126992 13187919 ~ 13200640 (-)
G112261 NA non-coding upstream 153003 13213930 ~ 13227818 (-)
G112260 NA non-coding upstream 156276 13217203 ~ 13249624 (-)
G112299 LOC107750016,LOC107549467,LOC107692576 non-coding upstream 228278 13289205 ~ 13292423 (-)
G112315 NA non-coding upstream 370217 13431144 ~ 13434295 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 676948 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1188082 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 1643620 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 1668404 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 1768965 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 593133 13654060 ~ 13683909 (-)
G112478 NA other upstream 1173627 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 1437336 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 1521552 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1838255 14899182 ~ 14904907 (-)

Expression


Co-expression Network