kcnn4 (kcnn4,LOC107595330,LOC107714738,LOC107699521,LOC107723512,LOC107570842,LOC107657667)


Basic Information

Item Value
gene id kcnn4
gene name kcnn4,LOC107595330,LOC107714738,LOC107699521,LOC107723512,LOC107570842,LOC107657667
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15735273 ~ 15753910 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260582.1
CATTACGTCATTCCTAGAGGAAGACAAGCAAGGATTTGCGCATAGAAATAGAATCTGCTTCAGTTCATTGGGTTTGAAGGAGGTGGATTGTAAACGAAGAGGAGAGAGCGACAGACCTCGTGGCCACGCATGTTTAGTTTCCGAGTTCCTGTCCCTCTTGAGTTCGTTATGGAAGTGACAATTTGATGTTTCGTGCTCCTGCTGTTTGAGGTCCACCTGCCAGCAAAGCAAGGCCTGACCTCGTATTTAATTCTTAAGAAGAAAGGCTTCGAGTCTTAACTGTatattcattttacatattgTGTAACTGGTGCTGTGAAATGTTTCAAAAGGCTAACCTCGTAAACTAAAACTTGTTGCTAAACACGCTAGTAGGGTTAACCATAGCACAATAAGTTACCAGCCTATCGTTGCAATTACTCGGGCGGTGCACTTACATGACTAATGCCGTCAGTATTTAGCTTGGGCCTACCTAAAAGAAATATGCTTTGAATGCATATACAATTAATCTAGTGATGTCATTCGTGAGCAGATTGTTCCCCGAAAATACACAACCTTAATTGGAGCACTGGACCTATATACAGTCAACTAAACCGTTAGTCTTGCATTAAACGGGTCTAACACTAGAGGTACCCCTCTGGCAGTGTCTGCATTGACTGTATTTTCTGGCTCAAACGCGCAAACACGAGCTATTAAACACTTCATTCTAACACTTGAGAATATCTGGGCAACCGTCGGgaactttactgtcatttaacTTACATTTAGCTTTGCCTTTGCGCTGGTCTCGGACTGTAGCTCTTTGAGACCCAGGCGTGAACGACGGTTCGCTGAAAGAAACACTCATGACAACAAACGAAGAAAAACCGTATGTCACAGTCAACCTTTAGGCGACACGGCTTGCTGCAGTCCATCCACAGCTTAGCCTACGTAAGAGCGCTACTTCACAGTGAACAGTTTCAGAGCGCCTTCCCACAGACCCAAGTCAAACGCTGAGGCGCGTAACAGTGTAAGTTCGCAGGTAGGAGCGCGCGTTTCGGTTTTCACTCCGTGCTTTGAAATACTTCTTGTCTTCAGCGTGCTATGCCTTCCGAAATTTTGGTCGGAGAGGGGGAAGGACAGGATGGAGAACAAGGCGACTGATGTCTGTACGAGCTGAAGACGAGAGCGCGCTATGGAGATGACCGCTCGCCTTGCGCACTCGGACGCCAAGGTGGATGGCAGAAACTGTGATGGACTTGTCAACCACAACGGGGAAACGACGGAGATAAGAGTGCCGCTGTCTCACGCGGGGAAGAGGCTCAGTCCGATCGAGGGGGGGAATCTTTACAGACTGCGTGACAGAAAGTTCCTTTTGGAGGACAAGAAGCGCCTCTGCGCGTGGGCACTGGGGACCGCGGTGTTAGGCATTCTGCTGATGGTATTACATGCTGAGCTGTGCCCAGTAGTGTATCAACCAGGATCCATATATGCCCTCTCCATTAATGGTCTCATCAGTTTCTCCACGGGGTGTTTGCTCATTCTCATCATCGCTTTCCATTATAAAGACATCAGACTTTTCATCATTGACCACAACCAGGTGGACTGGCGCATTGCCATGACCAGCAACCGGGTGCTCGGCATCTCCCTGGAGCTCGTTGTCTGCGCTATCCATCCCGTGGCTAACTACCTGAGGCCCGACATGGAGGACGGAGTCTGGGAGAAGCCAGAGCAAAACTCCTCTACCCCCCTCTGCTTGTCCTCCAGTCACAGAGCAGTCATGCTGGATGTGGAGCTGCTTCTTTCGGCCCTCATGTTCCTCAGGCTCTATCTGGTGCACAGGGCCGTCCTGCTACACAGCAAAGTGCTCCTCAGCGCCTCGTACAGGAGCATCGGCTCCCTCAACAACATCAACTTCACCTTCCGCTTTGTGCTCAAGGTGCTAATGAACAAGTACCCGGCCCGCACGCTGCTGGTCTTCATTATGTTCTTCTGGCTCTCCGCTTCTTGGATGCTGCGACTGTGTGAAAGGCAGCAGCAGGTAGAGACAGGCGGCATGGATACAGCATTGTGGCTCATAGCCATCACTTTCCTCACGGTGGGATATGGAGATGTGTCCCCTCACACCAGCTGTGGCAAGGTGGTGTGTCTATTCACAGGTGTCATGGGTGTGGCATGTACTGCTATGTTGGTAGCCGTCATGACTAAGAAATTGGCGCTTAACAAAGGAGAGAAACATGTGCATTTCTTCATGATGGACATTCAGATCTCCAAGCGGATCCGGCACGCAGCAGCCAACGTGCTGAGAGAATGCTGGCTGCTTCATCGCACCACCCAGACAAAAGACAACAGCGGAGAGCATCGTCATCACCAGAGACACCTGCTGGAGGCCATCCGTGTATTTCGTAACCTGCGGTTGAAGCAGAGGAAGTTAAGAGATTTTGCCAGTGAGATGGTGGATCTCTCGAAGATGCAGATGATCATGTGTGATCTGAGTGCGAACTGGAACAGCTCTTACCATGAGCTTGAGCAGCGAATCATCTCTATGGAGCAGAAGCTGGACGAACTGGGACGCTCGTTTCAGATCACCTCGGAGCTGCTCACACAGGCGCTACATCGCCGCAGACTGGACCACAGGTGACCTGTGACATCTCTACTGAAGGCTTGTGTAGTCTTCATCCTCAAGCCTCTTGAACTGACGGAGGGACTTTATGACAAACTTCAAAAGGACTGAGAGCAGCAACGACCTCTGCAGACTTCCTTTTATTTTCGCGtgtatttatgaacatttcctCATTGCTACAAACACGAGCTTgggaaaaaaggtcattttgcttattttaaacttttgacTTCTAATTTTCAGTCTCAGTTTATGATTGATACCGAAACTATGAGACGGAGATTCTGGTGTTACACTAAGGAACAATTTTAGATAGAAGAACCATGAAACTTTTTACAGTTCCTGTTTGTAGGTGAGACTGCGGAAGTTAGTCTTTCATCTCAGAAGTGGGAAATATGAATCAAATAACCTAATGGCTCTAATCTGATGCACTATTTTCCAGTTATGTGCGTATAACCTGGTAATGACATGCTGATAAAGGTCTGTGTAACTTGCTGGCAACTTTTTCAAAGATAAGTCCGATAAATTGTCGAGGATAAGCAGACTTCCTCACAGACTTGTACACTGCTATTTTTAGAACAACCTTAATTGAGGCAGAACCACCTGCACCCAAAGTAccccaataaaaaaatctgggAATGACTTGAATTTCCATTAGCCCTTTAACCTGACAGGGCATCTGTTGAATGACGGCATGTGGCGGCTCTAATTACACCATGAAAAGGTTTTGCGTAGTACGGTATTCAGAATACTGGTGTAACGGAAAAATCTTTATTGCTTGAGCCtgtatttaagtttattaagACAGAGGCTGTCAGTCGTCTCTGGTATCTCCTCCTGGTGGACAAAATATGTGTTGCATGTTTGGCCATCATTCCTGTTAAGACTGTGCTTGTCCTGTATCGTTTGCGCTGAATATTTTCGAAATAGATTAGATGTGTATGCTGTATAATGATCATATGAGGGCAGTGGGTATACGAAAAGAGGTCAGGTCTGTTGTATGTAGttcttttataaacaaattgaaATTTTGCCTTGGTTTTACTGCTGTCTTTGCGTATTTGAAACA
>XM_043260583.1
CATTACGTCATTCCTAGAGGAAGACAAGCAAGGATTTGCGCATAGAAATAGAATCTGCTTCAGTTCATTGGGTTTGAAGGAGGTGGATTGTAAACGAAGAGGAGAGAGCGACAGACCTCGTGGCCACGCATGTTTAGTTTCCGAGTTCCTGTCCCTCTTGAGTTCGTTATGGAAGTGACAATTTGATGTTTCGTGCTCCTGCTGTTTGAGGTCCACCTGCCAGCAAAGCAAGGCCTGACCTCGTATTTAATTCTTAAGAAGAAAGGCTTCGAGTCTTAACTGTatattcattttacatattgTGTAACTGGTGCTGTGAAATGTTTCAAAAGGCTAACCTCGTAAACTAAAACTTGTTGCTAAACACGCTAGTAGGGTTAACCATAGCACAATAAGTTACCAGCCTATCGTTGCAATTACTCGGGCGGTGCACTTACATGACTAATGCCGTCAGTATTTAGCTTGGGCCTACCTAAAAGAAATATGCTTTGAATGCATATACAATTAATCTAGTGATGTCATTCGTGAGCAGATTGTTCCCCGAAAATACACAACCTTAATTGGAGCACTGGACCTATATACAGTCAACTAAACCGTTAGTCTTGCATTAAACGGGTCTAACACTAGAGGTACCCCTCTGGCAGTGTCTGCATTGACTGTATTTTCTGGCTCAAACGCGCAAACACGAGCTATTAAACACTTCATTCTAACACTTGAGAATATCTGGGCAACCGTCGGgaactttactgtcatttaacTTACATTTAGCTTTGCCTTTGCGCTGGTCTCGGACTGTAGCTCTTTGAGACCCAGGCGTGAACGACGGTTCGCTGAAAGAAACACTCATGACAACAAACGAAGAAAAACCGTATGTCACAGTCAACCTTTAGGCGACACGGCTTGCTGCAGTCCATCCACAGCTTAGCCTACGTAAGAGCGCTACTTCACAGTGAACAGTTTCAGAGCGCCTTCCCACAGACCCAAGTCAAACGCTGAGGCGCGTAACAGTCGTGCTATGCCTTCCGAAATTTTGGTCGGAGAGGGGGAAGGACAGGATGGAGAACAAGGCGACTGATGTCTGTACGAGCTGAAGACGAGAGCGCGCTATGGAGATGACCGCTCGCCTTGCGCACTCGGACGCCAAGGTGGATGGCAGAAACTGTGATGGACTTGTCAACCACAACGGGGAAACGACGGAGATAAGAGTGCCGCTGTCTCACGCGGGGAAGAGGCTCAGTCCGATCGAGGGGGGGAATCTTTACAGACTGCGTGACAGAAAGTTCCTTTTGGAGGACAAGAAGCGCCTCTGCGCGTGGGCACTGGGGACCGCGGTGTTAGGCATTCTGCTGATGGTATTACATGCTGAGCTGTGCCCAGTAGTGTATCAACCAGGATCCATATATGCCCTCTCCATTAATGGTCTCATCAGTTTCTCCACGGGGTGTTTGCTCATTCTCATCATCGCTTTCCATTATAAAGACATCAGACTTTTCATCATTGACCACAACCAGGTGGACTGGCGCATTGCCATGACCAGCAACCGGGTGCTCGGCATCTCCCTGGAGCTCGTTGTCTGCGCTATCCATCCCGTGGCTAACTACCTGAGGCCCGACATGGAGGACGGAGTCTGGGAGAAGCCAGAGCAAAACTCCTCTACCCCCCTCTGCTTGTCCTCCAGTCACAGAGCAGTCATGCTGGATGTGGAGCTGCTTCTTTCGGCCCTCATGTTCCTCAGGCTCTATCTGGTGCACAGGGCCGTCCTGCTACACAGCAAAGTGCTCCTCAGCGCCTCGTACAGGAGCATCGGCTCCCTCAACAACATCAACTTCACCTTCCGCTTTGTGCTCAAGGTGCTAATGAACAAGTACCCGGCCCGCACGCTGCTGGTCTTCATTATGTTCTTCTGGCTCTCCGCTTCTTGGATGCTGCGACTGTGTGAAAGGCAGCAGCAGGTAGAGACAGGCGGCATGGATACAGCATTGTGGCTCATAGCCATCACTTTCCTCACGGTGGGATATGGAGATGTGTCCCCTCACACCAGCTGTGGCAAGGTGGTGTGTCTATTCACAGGTGTCATGGGTGTGGCATGTACTGCTATGTTGGTAGCCGTCATGACTAAGAAATTGGCGCTTAACAAAGGAGAGAAACATGTGCATTTCTTCATGATGGACATTCAGATCTCCAAGCGGATCCGGCACGCAGCAGCCAACGTGCTGAGAGAATGCTGGCTGCTTCATCGCACCACCCAGACAAAAGACAACAGCGGAGAGCATCGTCATCACCAGAGACACCTGCTGGAGGCCATCCGTGTATTTCGTAACCTGCGGTTGAAGCAGAGGAAGTTAAGAGATTTTGCCAGTGAGATGGTGGATCTCTCGAAGATGCAGATGATCATGTGTGATCTGAGTGCGAACTGGAACAGCTCTTACCATGAGCTTGAGCAGCGAATCATCTCTATGGAGCAGAAGCTGGACGAACTGGGACGCTCGTTTCAGATCACCTCGGAGCTGCTCACACAGGCGCTACATCGCCGCAGACTGGACCACAGGTGACCTGTGACATCTCTACTGAAGGCTTGTGTAGTCTTCATCCTCAAGCCTCTTGAACTGACGGAGGGACTTTATGACAAACTTCAAAAGGACTGAGAGCAGCAACGACCTCTGCAGACTTCCTTTTATTTTCGCGtgtatttatgaacatttcctCATTGCTACAAACACGAGCTTgggaaaaaaggtcattttgcttattttaaacttttgacTTCTAATTTTCAGTCTCAGTTTATGATTGATACCGAAACTATGAGACGGAGATTCTGGTGTTACACTAAGGAACAATTTTAGATAGAAGAACCATGAAACTTTTTACAGTTCCTGTTTGTAGGTGAGACTGCGGAAGTTAGTCTTTCATCTCAGAAGTGGGAAATATGAATCAAATAACCTAATGGCTCTAATCTGATGCACTATTTTCCAGTTATGTGCGTATAACCTGGTAATGACATGCTGATAAAGGTCTGTGTAACTTGCTGGCAACTTTTTCAAAGATAAGTCCGATAAATTGTCGAGGATAAGCAGACTTCCTCACAGACTTGTACACTGCTATTTTTAGAACAACCTTAATTGAGGCAGAACCACCTGCACCCAAAGTAccccaataaaaaaatctgggAATGACTTGAATTTCCATTAGCCCTTTAACCTGACAGGGCATCTGTTGAATGACGGCATGTGGCGGCTCTAATTACACCATGAAAAGGTTTTGCGTAGTACGGTATTCAGAATACTGGTGTAACGGAAAAATCTTTATTGCTTGAGCCtgtatttaagtttattaagACAGAGGCTGTCAGTCGTCTCTGGTATCTCCTCCTGGTGGACAAAATATGTGTTGCATGTTTGGCCATCATTCCTGTTAAGACTGTGCTTGTCCTGTATCGTTTGCGCTGAATATTTTCGAAATAGATTAGATGTGTATGCTGTATAATGATCATATGAGGGCAGTGGGTATACGAAAAGAGGTCAGGTCTGTTGTATGTAGttcttttataaacaaattgaaATTTTGCCTTGGTTTTACTGCTGTCTTTGCGTATTTGAAACA

Function

symbol description
kcnn4 Predicted to enable Intermediate conductance calcium-activated potassium channel activity and calmodulin binding activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection; neuronal cell body; and plasma membrane. Human ortholog(s) of this gene implicated in dehydrated hereditary stomatocytosis 2. Orthologous to human KCNN4 (potassium calcium-activated channel subfamily N member 4).

NR:

description
PREDICTED: intermediate conductance calcium-activated potassium channel protein 4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260582.1 True 3671 mRNA 0.47 9 15735273 15753910
XM_043260583.1 False 3603 mRNA 0.47 10 15735273 15753910

Neighbor

gene id symbol gene type direction distance location
LOC122361102 NA coding downstream 10944 15722112 ~ 15724329 (-)
negaly6 LOC107714666,LOC107699454,LOC107657635 coding downstream 14150 15719163 ~ 15721123 (-)
LOC122360743 LOC107699524,LOC107714734,LOC107595292,LOC107595282,LOC107714733,LOC107699523 coding downstream 31093 15699733 ~ 15704180 (-)
LOC122360744 LOC107595282,LOC107714733,LOC107699523,LOC107699524,LOC107714734,LOC107595292 coding downstream 38668 15693764 ~ 15696605 (-)
LOC122360742 LOC107723437,LOC107570834,LOC107657661,LOC107595282,LOC107714733 coding downstream 42014 15688497 ~ 15693259 (-)
si:dkey-79d12.5 si:dkey-79d12.5,LOC107714671,LOC107595341,LOC107699478,LOC107657668,LOC107723514,LOC107570843 coding upstream 271 15754181 ~ 15759667 (-)
has1 has1,LOC107714739,LOC107723422,LOC107657615,LOC107699477 coding upstream 45176 15799086 ~ 15804702 (-)
prss1 try,LOC107714673,LOC107699515,LOC107595397,LOC107657672,LOC107723506,LOC107593633 coding upstream 113394 15867304 ~ 15869211 (-)
lratd2b zgc:110182,LOC107715046,LOC107699471,LOC107723393,LOC107593723,LOC107595500,LOC107657619 coding upstream 182737 15936647 ~ 15938890 (-)
prelid3a prelid3a,LOC107715058,LOC107723525 coding upstream 205759 15959669 ~ 15963708 (-)
G113168 ywhabl,LOC107595301,LOC107570839,LOC107723438 non-coding downstream 17387 15709738 ~ 15717886 (-)
G113179 NA non-coding downstream 29214 15705823 ~ 15706059 (-)
G113151 NA non-coding downstream 314846 15418906 ~ 15420427 (-)
G113139 NA non-coding downstream 322430 15407948 ~ 15412843 (-)
G113138 apoeb,LOC107714700,LOC107699536,LOC107723536,LOC107595129,LOC107657653 non-coding downstream 329190 15402327 ~ 15406083 (-)
G113187 NA non-coding upstream 9559 15763469 ~ 15763745 (-)
G113232 NA non-coding upstream 152323 15906233 ~ 15906830 (-)
G113231 LOC107714685,LOC107699511,LOC107657677,LOC107723481 non-coding upstream 153189 15907099 ~ 15908673 (-)
G113236 klhl38b,LOC107723565,LOC107657680,LOC107593636 non-coding upstream 157402 15911312 ~ 15946683 (-)
G113234 NA non-coding upstream 175312 15929222 ~ 15958664 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other downstream 63122 15659752 ~ 15672151 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other downstream 238860 15468480 ~ 15496413 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other downstream 359969 15365188 ~ 15375304 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other downstream 428662 15301874 ~ 15306611 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other downstream 719811 14970541 ~ 15015462 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other upstream 63069 15816979 ~ 15819086 (-)
G113220 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 other upstream 103689 15857599 ~ 15861893 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other upstream 247403 16001313 ~ 16006471 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other upstream 259054 16012964 ~ 16013751 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other upstream 385409 16139319 ~ 16141235 (-)

Expression


Co-expression Network