LOC122360214 (LOC107752837,LOC107662667,LOC107581612)


Basic Information

Item Value
gene id LOC122360214
gene name LOC107752837,LOC107662667,LOC107581612
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11437373 ~ 11453509 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260630.1
GTGCAATATTAGCAGAGTTGAGAGACCAAAAATCTTCTTTGAATCCTCTCCTGCTCACACAGGAATAACACACTCACCATGGAGGTCCACATGCGTCCTCTTCTCTATCTGCTGCTGTGTACATGTTCTGCCGTTCAGGGAGAGAATAAAAAGAGtttcCTAATCACTGCTCCGAGTGTTTTTCATGTTGGTGTGAAAGAACCCATATGGATTCAGGTGGGGGAGGCATTGCTTGGCAAGCCCGTGTCCTGTCAGTTAGAAACAGAGATGCGTGTTCCCATGACCACAAAGGAGACCAAAACAATCACCCAAAAGGGACAGTTTGAAGCAGTGAATCTTGAGATATTTGAAAGTAAAAGTTCAGACCTGAAATCGATCAACGGAGAGCCTCCCTATCTCAACCTGGCCTGTGAAGTTGATGGTCAGAAACGGCAGACCCGTGTCCTGGTCTCCAAACACAGTGGCTACATCTTTATTCAGACGAACCAACCTGTATACAACCCCACACAGAAAGTTTCGTTCAGGATTTTCACTTTCGACCACTCCATGCGACCAAAATCGGAAATAGTGTTTGTCCATATATACAATGCTGAAGGGAACAAGATTAAGAAATCATCATACAAAGTTTTAGGCGCCGTTCTGTCAAAGGACTACCACATCCCTGATATCGCAAAACCTGGTGTATGGAAGATTATAGCACACTACAAAGGTGATGAGAAAAATGCTGCGGTGCGTGAATTCAAGGTCCAGAAATTTGTTCTTCCCAGCTTTGAGGTTTCTATTCATTCAGAGAAAACATTTCTGCTTGTGAATGACGAGACATATATATTCACCATTAAAGCCTCgtACGCATATGGCAAAACCATTCATGGTGGTTTCCACTGTCGGTTTGGGATAAAAAAGGATGAGTCAGAGAATAATCCTGGAGAAATTGAATTCATCAAGGGACTGGAGCAAACTGGATCTGTGAAAGCAGGCAAAGCCGAGATTACAGTTAAAATTTCAGATCTCAGTCAAAAACTGAATTCATCATTAGAAGAATTAGCAGCAACTCAGGCCCAATTCTACATTGCTGTCTCGGTCACggatattttaaGTGGTGAGGTACAGGAATCAGAAGCTTTCCTTCCCATTGTTTTGAGCCAGTACAATGTGGATCTGTCGCGGACAAGATCGTTCTACACGCCTAAATTCCCCTTTGAAGTTGTGGTCACAGTCCGTTACCCAAATGGTTCCCCAGCTAACGGTGTTCAAGTGAACCTACATGTCCCAAGCACAACAGAAAAGCATAAAGATGTTAAAACTAATAAAGATGGAGTcgcatttcagatttttaactTGGAAGGAACACCATCTTCAGTTTCAGTGCAGGCAACAGTGGATGATATCAAGTCAACAAAAGTAGTGCACCCAATGAAATCCTCAACAAACAGTTTCCTGCATATCACTGTGACTAATAAAGTCCTGTCACTAGAAGAGTCTCtagatgttacattttatatcgAAGGCAAACCAGAAGAtgggaaaatatattatatgATTCTCAGCAGAGGCATGCTGAGATCAGCGAGCTCTGTTGCATCAGGTTCTGAAGTAAAAATACCCATCCGTATCCGTCCAGAGAATCCGTCCTTCAGAGTGATCGCCTATTACTATGACACAGACGGTGACGTCGTTGCAAACTCAGAATGGATAGATGTAGAAGACATGTGTGAGGGAAAGCTTGAGATAAAACTGCACGAAGACCATAGATACCATCCAGATGATACCGTCGAGCTCGACATTGACGTAGGAGAGCAAAAGAATGCAAAAGTGGCCTTACTAGTTGTGGACAAAGCCATTTGCCTGGGTGCTCAAAACAAACTCACTCCAAAACAGGTGTTCTCCTCCATGCAGTCTTATGATCTGGGGTGTTCGTATGGCGGTGGAGAGaacacagctgctgtttttaatgaTGCTGGCCTGGCCTTCATCTCCCACTCAACCTCGTTCCGTTCAATGATGAGAAAAGGTTTCAGCTGCGAGTCTGGTTTTAGACGCAACAAACGTTCTATAGATCTTCAAGCAGAAATGGCTAGAAAAGAAGCTGCATTTAAGAAAGCAGAACTGCAGAAATGCTGTCGCCATGGCTTCACCCTGATTCCTATGAAGTTTAGTTGCAAGGATCGAGCGAAAAGAGTTAGCAAAACAGAAAGCAAAGAATGCGTGGAAGTCTTCCAAGAGTGCTGTGAATTTGCAACCAAGCTAagagataaaaagagaaaagaggacCAAAGAACAGCAGTGAGTAGAACTGTTAATTCAAATGAGGTTGAGGATTTCTTAGACGTAGGGACAGATTCAGTTCGCCGATATTTCCCTCCAAGCTTTGAGTTTAAGCAGATTGACGTGAAAGAAAAAGTTAGGCACAAAATCCATTTACCACACTCTATCACCACATGGGAGATCCAGTCTCTAAGTTTTTCTTCATCCCATGGTTTTTGTGTGGCGGAGCCAATTGaccttactgtatttaaatcagtgtttatTTCCTTGAGGCTGCCCTATTCGGTTAAACGCTTTGAGCAACTGTCTATAGTTGCAGTGATATTTAATTATGGCAAGATGGAAAGGGAGCTCGTTGTGCGAATGGGACAAGTGGAAGGTCTTTGTTCACCGGGATCAGCATCTTCCTCTTCTGCTGTCCGGATCAGTCTAAAGTCACAGTCATCTCAAACTGTGACTTTCCCTGCTGTTCCCATGAAAATAGGTGAAATCCCTATAACTATAGAACTTCATGAAGTCGAAGAAAACGAAGAAATAAGAGTGGATACCATTGAAAAGATGCTACTGGTCAAGaGTGAAGGGGTGGAAATGAGAGAAGAGCAGACTTATTCTATAAATCTGGATGGTAGAAGTGACCGACGCTTGTTTATTGATGGATTGTTCCCAAACAACACTGTTCCTGAAACAGATGTCAACCTTTTTGTCAAACTAGAAGAAGAAGTATTTGCCAAGTCCACTGCCGTTCCGTTACTCTCATCATCCAAAGTGGAAAATCTGATCCGGGCCCCTAAAGGATGTGGAGAGCAGACTATGATCTTTATGTCTCCTACTGCCTTGTCCATCCGCTACCTGGACAAAAGTCAGCGCTGGCTGGAACTGGAAGCAGGATCCAGAGACAAAGCGCTGAATTTCATTGAGCAAGCATATGAACGGATTTTAACATTCAAAAAGCCTGATGGATCCTATGGAGCTTGGCTAAACCATCCCACAAGCACCTGGTTAACTGCGCTGGTGGTGAAGGTGTTGTCTCTCGTGGCTGAACGACAGATAGAAACTCTTGAACAGCAAGGAACAACAGAGAAGATTATTTCACAGGAGGACATCCGCCACGCCGTGACatatctgataaaaacacagagcTCCAGTGGGTCCTTCACCGATGCTAATCCAGTCTATCACAGAGAAATGCAGGGAGGTATTGGAGGAGTTGAGCAAGATGCCTCTTTAACAGCATTTATCACGATAGCTCTTTATCGTTCCCTACCTTACTTGGATAAAGAAGAAATTGAAGTGAAAAAAAGTATCTCTCTGGCCACCGGCTTCCTTCTTAACCGGGTCGATGATCTTAAAAGACCTTACGCGTTAGCCATTACAGCGTACTGTTTGTCCATCTGCCTCACTGACCGAACTCAGTCACTGTCCGCCTGGAAGAAACTCAGAAGTCTTGCAAAACCAGCGGAAGAGTGTCTTGTCTGGAAAGATGATGACAATGTGCGACTGCTAAATGAGGCAAAAACGTCCCGTGTGCCCCCCGGAGTGGCGTTAACAGTAGAGACCACTGCATACGCTCTACTGACTGCACTCGCACAGAATGACTTATTCACAGCAAATGGCGCCGCATGCTTCTTGTCTTCACAAGAGAACTATGAAGGAGGTTTTAAATCAACACAGGACACTATTGTGGCTTTGGAAGCTCTATCGGAATACGCACTAAGTATACCTGAAGCCCCCTTCACTAAAATCAATGCACAGTTCACCGTTCAAGGGAGGTCTGAGATGGAAAAGCTGACTTTGGACAAAAACGAAAAAGTGGAAATAGAATTAAAGAGACTAGTGGGAATGGGAATAGATGTAACCGTTTTCGGTaaaggaaaaattaaaatgaaaGTGGCAAAGGCTTATTATGCTCACAAGGAAGACTCCAACTGCGCTGACTTGTCAATAAAGGTGACTGGAGGAAAAGTGGAATACACAAgtGATGTACAACAAACTTACAATTACTACGAGGACTATGAACAAGATGAagagaggaaggaggaggaagCTCCTCGGTCAGCCATCGAATGGTTTGATGCTCGCAGCCGACAAAAAAGAGAcactacacaaaacacacaagacGAAGTAGTCTATACAGTGTGTGTCAGTCACACACAGGGAAGAAACCTCTCTGGAATGGCCATTGCTGACATCACTCTACTTAGCGGCTTTGACGCAATCAGTACAGATCTAGAAAAGCTAAAAGATCTGGTGGACATGTATATTTCTCACTATGAGGTCACACGAGGAAGAGTGCTGTTGTACTTTAATGAGATAGATGAAGGTGAGGCCTGTATAGCTTTTGGAGCCAAGCAAAGTGTGGCTATTGGTTTGGTTCAACCAGCTCCTGCGACCTTTTATGACTACTATGAGCCAGACAGGAGATGTTCAGTGCTGTACAGCGCCCCCAAGAGGAGCAAGGCAGTTTCTCTCCTGTGCTCAGATGATGTGTGTCAATGTGCAGAAAGAGgttgtttcacagaaaagaaaacaattgaCATGGGAATCACCAAGAAGAGATTCGATTATGCTTGTTTCCACACCAGCATTGACTATGCATTTGAAATCATTGTGGATTCAGTTACTGAAGAGAGCAGCTTTATGTTGTATTCAGCAACTGTGACTGTGGTCCTCCGACATTCGGGAGACGAGGCGTGAACGCAGACAGCACGCGGGTGTTTGCCAAGAGAAAGCACTGCAAGGGTGAGCTGAAAGAGGGCAAGACGTACCTCATCATGGGCAACGATGGCCCCACCAAAGACTTAAATGGAAAcatGCAGTACCTACTGGATTCAAAAACATGGATTGAGGAGAAGCTGCCGCCCTCAACATGCAGGCGTCAGTCAATATGCGTTTCTGCAAGGAATTGAGAGATTTTGTGAAAGAGTACCAAGTTAATGGATGCAACATGTAGTCTCAACTGCAAATTTTGGACATTTAATTACTGAACATCtcactgcagaagaaaaaaaatccacgtTTATTCTGTATTGTAAACTCGCTCTTCTTTTTATGCTACCATTTATGGGAACCTTTAGTCCGTTTCAAAATACATGTGCTTATAAAACA

Function

NR:

description
PREDICTED: complement C4-like isoform X1

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0052547 regulation of peptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260630.1 True 5370 mRNA 0.44 47 11437373 11453509

Neighbor

gene id symbol gene type direction distance location
LOC122361032 LOC107746978,LOC107684223,LOC107551206,LOC107704083,LOC107751909,LOC107601659 coding downstream 614184 10817891 ~ 10823189 (-)
LOC122361028 cabz01093075.1,LOC107601667,LOC107751875,LOC107746976,LOC107704092,LOC107684228,LOC107551204 coding downstream 626356 10808337 ~ 10811017 (-)
colec10 LOC107738939,LOC107574455,LOC107677951 coding downstream 849655 10571751 ~ 10587718 (-)
mal2 mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116 coding downstream 867576 10553160 ~ 10569797 (-)
LOC122361025 LOC107757443,LOC107691877 coding downstream 1015094 10408015 ~ 10422279 (-)
LOC122360822 LOC107596715 coding upstream 39590 11493099 ~ 11501213 (-)
skap2 skap2,LOC107743153,LOC107684555,LOC107685583 coding upstream 144822 11598331 ~ 11614258 (-)
hoxa2b hoxa2b,LOC107685611,LOC107684556,LOC107550809,LOC107743221,LOC107744722,LOC107596758 coding upstream 166004 11619513 ~ 11630905 (-)
hoxa9b hoxa9b,LOC107743222,LOC107684557,LOC107744723,LOC107685612,LOC107550810,LOC107596757 coding upstream 175590 11629099 ~ 11633344 (-)
hoxa10b hoxa10b,LOC107685613,LOC107743223,LOC107550811,LOC107744724,LOC107684558 coding upstream 179981 11633490 ~ 11636603 (-)
G111453 NA non-coding downstream 170548 11266596 ~ 11266825 (-)
G111452 NA non-coding downstream 171159 11266003 ~ 11266214 (-)
LOC122360619 NA non-coding downstream 173135 11261627 ~ 11264238 (-)
G111437 NA non-coding downstream 176325 11260745 ~ 11261048 (-)
G111421 NA non-coding downstream 211300 11225782 ~ 11226073 (-)
LOC122360676 NA non-coding upstream 26597 11480106 ~ 11481227 (-)
G111508 NA non-coding upstream 34173 11487682 ~ 11488827 (-)
G111516 NA non-coding upstream 90407 11543916 ~ 11544332 (-)
LOC122361126 NA non-coding upstream 109369 11562878 ~ 11569737 (-)
G111559 NA non-coding upstream 209409 11662918 ~ 11666274 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 25596 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 50380 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 150941 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 553949 10857520 ~ 10883424 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other downstream 673068 10745576 ~ 10764305 (-)
LOC122361049 c16h2orf66,LOC107743229 other upstream 412171 11865680 ~ 11867315 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 910276 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 2200551 13654060 ~ 13683909 (-)
G112478 NA other upstream 2781045 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 3044754 14498263 ~ 14503136 (-)

Expression


Co-expression Network