G10209


Basic Information

Item Value
gene id G10209
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 15953799 ~ 15954449 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11240
CCTCTGGCCTCAATTACTGCTCACTCTTGTACAACCAGATCTGCTCCATTATAATGGCTGTGTAGATCTTTGACTTGGTTCCTTTGAGCTCCAGGAAGCCACTCTTTTGGCAGTGACTGCCAGGGCCAAAACGTGGACGGCCAAAAACCAGCTGCTCTTTGACCCGCTCCTGCAACATGCTGCACCATTTGCTCCTCTGGACTACAAGACATAAAAGAGAATCATAAAGGTTTCTTTTACCCTAGTTCAATTTCAAATAAGCAGTAAAACACTTTTCTAAAGATCCATTCCAATTCTACATTAATATCAGCCATAAAAAAGATGGTCCCACTTTATATTAAGTGTATTTAACTACAATGCACTAACATTTAAAGGGGTGGTTGATTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11240 True 389 lncRNA 0.32 2 15953799 15954449

Neighbor

gene id symbol gene type direction distance location
CI01000000_15893372_15894283 NEUROG1 coding upstream 58906 15891679 ~ 15894893 (+)
CI01000000_15684820_15696865 NA coding upstream 256684 15684495 ~ 15697115 (+)
CI01000000_15620007_15622711 PCDH11X coding upstream 330957 15620007 ~ 15622842 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding upstream 424904 15519933 ~ 15528895 (+)
CI01000000_15158265_15165627 NA coding upstream 787527 15157022 ~ 15166585 (+)
CI01000000_15964514_15964804 NA coding downstream 9878 15964327 ~ 15964961 (+)
CI01000000_16011590_16014992 NA coding downstream 57141 16011590 ~ 16015151 (+)
CI01000000_16034357_16056363 SMAD5 coding downstream 79449 16033898 ~ 16056594 (+)
CI01000000_16066787_16081915 LMAN2 coding downstream 111860 16066309 ~ 16082483 (+)
CI01000000_16087757_16091758 TMED9 coding downstream 132984 16087433 ~ 16092035 (+)
G10185 NA non-coding upstream 20423 15932984 ~ 15933376 (+)
G10203 NA non-coding upstream 22332 15931260 ~ 15931467 (+)
G10200 NA non-coding upstream 23835 15929668 ~ 15929964 (+)
G10052 NA non-coding upstream 72277 15872401 ~ 15881522 (+)
G10080 NA non-coding upstream 170281 15783238 ~ 15783518 (+)
G10240 NA non-coding downstream 46403 16000852 ~ 16001649 (+)
G10255 NA non-coding downstream 59392 16013841 ~ 16014082 (+)
G10293 NA non-coding downstream 231446 16185895 ~ 16186172 (+)
G10294 NA non-coding downstream 231821 16186270 ~ 16186508 (+)
G10305 NA non-coding downstream 248638 16203087 ~ 16203431 (+)
G10201 NA other upstream 23237 15930266 ~ 15930562 (+)
G9201 NA other upstream 1718858 14215024 ~ 14234941 (+)
G7522 NA other upstream 3774791 12178369 ~ 12179008 (+)
G7514 NA other upstream 3816791 12136522 ~ 12137008 (+)
G7153 NA other upstream 4708166 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 1384705 17339154 ~ 17346200 (+)
G11465 NA other downstream 1929504 17883953 ~ 17887462 (+)
G11521 NA other downstream 2078290 18032739 ~ 18164112 (+)
G11801 NA other downstream 2726418 18674116 ~ 18745376 (+)

Expression


Co-expression Network