lratd2b (zgc:110182,LOC107715046,LOC107699471,LOC107723393,LOC107593723,LOC107595500,LOC107657619)


Basic Information

Item Value
gene id lratd2b
gene name zgc:110182,LOC107715046,LOC107699471,LOC107723393,LOC107593723,LOC107595500,LOC107657619
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15936647 ~ 15938890 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260718.1
actaaaataatacatttcaggGCAAGAAATCAGCAAATTATGTGATAGGTTAATGTTGGTCACACTAGTTCATCACACTGACTGACTTGATTCAAAAGCGACTTCTGTGTGACCTTGGgcagatttattttaaacattaccgCAACATAGATCAAATTTAGCAGACATTTCGCTAATGTTGATTCTGGGCGAAtcatatataatgtaacatttgaaTGTTAGACTTTATTCAGAGgcattacataatatatacttaatataattCACACGCCCCctgtgaataataattaaaacgaTTTTAAGTAGCGCAgtaattttaaaagatttgtaaTAGACTGCATTCTTAAGTATTGCATCATCACGACGCCTGAAAATGTCAACATGTGTGAGTTTAAAGTTCAGATATGTCACATGGAACCCCAAGTCAATAAAAACCAGTTAATTGACACCTCGAAATAAAGCAGGCAAATATAGACTATTAGCCTCTAGTCAGAAAGACAATCTTTAAACTTTAGACTGTGAGCGAATTTATCTTACCGAGTGAGTCTAAATGTGCGCTGTCCCTTTAACTGACCGTGCCTTGTGTAAACATTGCCGTGCTCGCTACTATTTCACACAGAGCGCTGTTGCTGCCTCCGCCAGAACTTCAAAGAGCCGCGGACGCCATCCATTACTCGGAAAGGTTGGAAGTAACTCATCAAAAGTGCATTTCTTTCTTGGAGACGTTACCGCAGGACTCCCCGCGGGTTCACCGCTGCGCCCGATGGGCTTCCCCCGTCTGCCGCTCGCAGCAGGAAGTGAGCAGGTGAGACGCACCTGTTCGGAGCGGAGCCTGAAACCCGGCGCTGTCTGACGGCTGGCGGACCCTCCGGACAGCTGTATGATACGCCAAAACGCACATCGCACACTTGTTCTAAACAGCAATTATTCGCCGATAAAAAGGAGACATGGACTTAGACCCGAACTGGGCTCCAAAGCCGGATTACGTGTCGCGTTTTTGAAATCTCCCCTCCGCGACCAACACAGGTGGGACGCGAAACTGTTCACGCGAGTTTCTGTTATGGGCAATCAAGTGGAGAAACTTACCCATTTGAATTACAATGAATTACCCACGACCGACCCTAACGGATTGGACCTGGAGGACGACGCTCCGCGGATCGGCGTGTCTTATATTTTCTCCGCGGACGACGACGAGCAAGAGGAGAACATCGACGAGAGCGAGAAGGAAGACGTCAAACACTACGACTGCCGCAACGAATTAGAAAGCGCGGTGTATTATCGCGACGAGTGCATATACGAGAGGAATAGCAGGTTCGGTGAAGTGGGAACCCTGTCGTGTGAAAACTTGGCGAGTAAGTGCAAACCCGGCGACCTGGTGGAGTTCGTGGCTCTCGGGCAGTACCCGCACTGGGCAGTGTGCGTCGGCGACCTACAGGTGGTTCATTTGCACAGAAACGAGATTAAATGCGAATTTCTGTTCGATGCCGGTCAGGGCAAAAGGGGCAGAATTGTGAACGAGCTGTATAAGTTTCGCGCGCTGAGCCCGGATGTCGTGGTGCAGAACGCCACGGAGCAAGTGGGGGCGAAAGAGCGAGACGTTTGCTGGAAGAACTCCGAGTGCTTCGCTGCCTGGTGCAGGTTCGGCAAGCGCGAGTTTAAGACGGGAGGCGAGATACGAATCGGCAAGCAGCCCTACAAGATGAAGCTGCAGCTGTCGGAGAAGAAAAGTCACGTTCTGGACTTTCAGAGTTTGGAGGATCTGATCATGGAAAAGAGGAGAAACGATCAGATGGGAAGGGAATCCGTAGTTCAGGAACTGGAGAATCATTTGAATTGCACAGAAGACACTGAGAATGATTACAATTGTAACTGATGGTGGATCAAAGAGGGAGGTTCTCCGGTGGCCAGACCGCCTCATCATGGTGGATATGGGCTTTATTTGTAATCACCTCAAGCGCAGCGGCAGTGTTGcaatttcatcagtttctcAAGAGAGTTTTCCGTCAGCAGCGCTTTTATAAATTGGACAACTTCAGCTTGTTTGCATTGATAATcctggtgtgtgtttttttttgtaatgaggATTTGATCATTCCGTCACTTTGCTGTATTCAAGGGAAAGCTTTACTAAAGCCTTTCCATATCACCTTTTAATGatcatagcattttattttgaggACTGGCAAAGTATGTATTCCCTTGACACAAATTTCAATAAAGTCTCAATATTTTCTGAATACTTAA

Function

NR:

description
protein FAM84B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260718.1 True 2244 mRNA 0.46 1 15936647 15938890

Neighbor

gene id symbol gene type direction distance location
prss1 try,LOC107714673,LOC107699515,LOC107595397,LOC107657672,LOC107723506,LOC107593633 coding downstream 67436 15867304 ~ 15869211 (-)
has1 has1,LOC107714739,LOC107723422,LOC107657615,LOC107699477 coding downstream 131945 15799086 ~ 15804702 (-)
si:dkey-79d12.5 si:dkey-79d12.5,LOC107714671,LOC107595341,LOC107699478,LOC107657668,LOC107723514,LOC107570843 coding downstream 176980 15754181 ~ 15759667 (-)
kcnn4 kcnn4,LOC107595330,LOC107714738,LOC107699521,LOC107723512,LOC107570842,LOC107657667 coding downstream 182737 15735273 ~ 15753910 (-)
LOC122361102 NA coding downstream 212318 15722112 ~ 15724329 (-)
prelid3a prelid3a,LOC107715058,LOC107723525 coding upstream 20779 15959669 ~ 15963708 (-)
rbfa LOC107699468,LOC107715083,LOC107596252 coding upstream 59422 15998312 ~ 16000648 (-)
LOC122360718 jarid2a,LOC107714830,LOC107595576,LOC107699452,LOC107593646,LOC107657689,LOC107723487 coding upstream 131649 16070539 ~ 16103655 (-)
LOC122361095 LOC107596551,LOC107699467,LOC107715090,LOC107657620,LOC107578647 coding upstream 210073 16148963 ~ 16152079 (-)
LOC122361096 zgc:136493,LOC107699466,LOC107714862,LOC107596560 coding upstream 213614 16152504 ~ 16154388 (-)
G113231 LOC107714685,LOC107699511,LOC107657677,LOC107723481 non-coding downstream 27974 15907099 ~ 15908673 (-)
G113232 NA non-coding downstream 29817 15906233 ~ 15906830 (-)
G113187 NA non-coding downstream 172902 15763469 ~ 15763745 (-)
G113168 ywhabl,LOC107595301,LOC107570839,LOC107723438 non-coding downstream 218761 15709738 ~ 15717886 (-)
G113179 NA non-coding downstream 230588 15705823 ~ 15706059 (-)
G113244 LOC107715075,LOC107699469,LOC107595516,LOC107723556,LOC107593640,LOC107657683 non-coding upstream 25868 15964758 ~ 15967193 (-)
LOC122360541 NA non-coding upstream 45851 15984741 ~ 15986184 (-)
LOC122361072 LOC107723533,LOC107657692 non-coding upstream 127276 16066166 ~ 16067545 (-)
G113281 NA non-coding upstream 181436 16120326 ~ 16196677 (-)
G113300 NA non-coding upstream 251972 16190862 ~ 16192689 (-)
G113220 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 other downstream 74754 15857599 ~ 15861893 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other downstream 117561 15816979 ~ 15819086 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other downstream 264496 15659752 ~ 15672151 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other downstream 440234 15468480 ~ 15496413 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other downstream 561343 15365188 ~ 15375304 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other upstream 62423 16001313 ~ 16006471 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other upstream 74074 16012964 ~ 16013751 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other upstream 200429 16139319 ~ 16141235 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other upstream 279771 16218661 ~ 16228466 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other upstream 294082 16232972 ~ 16239506 (-)

Expression


Co-expression Network