G10255


Basic Information

Item Value
gene id G10255
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16013841 ~ 16014082 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11295
GCATCTCCAGTCTTCAGTGTCACATGATCAAGGAACATTTCTCATTATTATCAATGTTGAAAACAGTTGTGCTGCTCAATGTTTTTGTGGAAACACTGATACACTTTTTTTTCAGGATTCTTTAAAGAATAGAAAATTCAAAAGAACATTATTTTAAATGGAAATATTTTGTAACATTATCACTATCATTCAAAAGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11295 True 200 lncRNA 0.29 2 16013841 16014082

Neighbor

gene id symbol gene type direction distance location
CI01000000_15964514_15964804 NA coding upstream 48880 15964327 ~ 15964961 (+)
CI01000000_15893372_15894283 NEUROG1 coding upstream 118948 15891679 ~ 15894893 (+)
CI01000000_15684820_15696865 NA coding upstream 316726 15684495 ~ 15697115 (+)
CI01000000_15620007_15622711 PCDH11X coding upstream 390999 15620007 ~ 15622842 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding upstream 484946 15519933 ~ 15528895 (+)
CI01000000_16034357_16056363 SMAD5 coding downstream 19816 16033898 ~ 16056594 (+)
CI01000000_16066787_16081915 LMAN2 coding downstream 52227 16066309 ~ 16082483 (+)
CI01000000_16087757_16091758 TMED9 coding downstream 73351 16087433 ~ 16092035 (+)
CI01000000_16096527_16100582 B4GALT7 coding downstream 82445 16096527 ~ 16101229 (+)
CI01000000_16106717_16114328 EMX1.2, EMX3, EMX1 coding downstream 92516 16106598 ~ 16114355 (+)
G10240 NA non-coding upstream 12192 16000852 ~ 16001649 (+)
G10209 NA non-coding upstream 59392 15953799 ~ 15954449 (+)
G10185 NA non-coding upstream 80465 15932984 ~ 15933376 (+)
G10203 NA non-coding upstream 82374 15931260 ~ 15931467 (+)
G10200 NA non-coding upstream 83877 15929668 ~ 15929964 (+)
G10293 NA non-coding downstream 171813 16185895 ~ 16186172 (+)
G10294 NA non-coding downstream 172188 16186270 ~ 16186508 (+)
G10305 NA non-coding downstream 189005 16203087 ~ 16203431 (+)
G10308 NA non-coding downstream 193177 16207259 ~ 16207561 (+)
G10316 NA non-coding downstream 205084 16219166 ~ 16219378 (+)
G10201 NA other upstream 83279 15930266 ~ 15930562 (+)
G9201 NA other upstream 1778900 14215024 ~ 14234941 (+)
G7522 NA other upstream 3834833 12178369 ~ 12179008 (+)
G7514 NA other upstream 3876833 12136522 ~ 12137008 (+)
G7153 NA other upstream 4768208 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 1325072 17339154 ~ 17346200 (+)
G11465 NA other downstream 1869871 17883953 ~ 17887462 (+)
G11521 NA other downstream 2018657 18032739 ~ 18164112 (+)
G11801 NA other downstream 2666785 18674116 ~ 18745376 (+)

Expression


Co-expression Network