LOC122360309 (LOC107699461,LOC107715144,LOC107596268)


Basic Information

Item Value
gene id LOC122360309
gene name LOC107699461,LOC107715144,LOC107596268
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16324175 ~ 16327955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260805.1
ttcttataAAGTAGTTCaggctacattttttttgccttaGTTACCAGATGTTCTTTAAACCACTCCCTAAATCCACacctaaacctttttttataaacagCTACCACATCATTTTGAAACATGCAGAGATACCAATATTATAACCACCTGTGCACAGATAAGAGTCATCATGTCAGATGAAGTCAACGTCTTTATGGACCCTTTCCTCAAAATCTACACAAATCCACATCAGATAGAAGTAGCCGATAGCCTCACCGAATCCTTTCACGAGGACATTGTGCTGAAAGAGCGTCAGAGAAACACGGAATTGTTGGAATCTCTAGGAATCGTCCAGTCAAAACTTATTCAAAGTATGGAGAAACAACCAGAGAACCCGAAACACAGTAATTTGAACATCGTTGAATCAAAACTTAATGATgtgaaggaaagagagaggcttagagaaaaaaagagtggTAAAGAAAGGCAAGCGGAGAAAGTGATACACATAACAAACGAAACAAATGTAGATCAGACAGGAAAAgctgaaatgtgtcattttgacATGAAACAGATGGAAAGATTTCTTGAGGAGGAAAGTGATCAAACCAAGGCTGAGGAACCAGAACGACAGCAcgtgagagaaaaaaagcagagtgttaaagaaaaacaagcagagaAACAAGcgatgaataaaacaaatgaaactaCTGAAGATCAGTCAGAAAAGGTTGAAATGTGCCATTTTGATATGGCGAAATTTCTTGAGGAGCAAAATGAGCAAACTGAGGATGAGGAACCATGCAAAGTGACCACAGAACAACAACATATGAGTGAAAGAAAGCAGAGTGTTAAAAAAGCGAGACATataacaaatgaaacaaatgaagaTCAGTCAGAAAAAgatgaaatgtgtcattttgacATGATGCAGGATGCAAAATGTCTAGAGAAACAAAATGAGCAAATCGAGGGACTGTGTGAAGGGACGAAAGAACATCACATGAAGGCTGTTGATAAAGAGGAGCAGAAAGCACTAAAAAATTTAGTTCTGATGATAAATGAGGAAGAGAAGGAAATGGCCGAGTGTGGAAAAGCTACAgacattcacaaaacaaaacaagctcaCAGCGTCGAAGCAGAACATTTTCACCAGCCACATGCTGCTATAGCGAAGAAAGATTTGTTGACAGAAAAAGCTAAAAAGACAGATCTCGGTGAACCATTAAACAAAGTCGCCactaaagaagaaaataaagaggTTATGAAGATACGGGAGCAAGAACTGCTCAGTGGAGGAGTGTGTCCAGAAGTCAAGAAGGCACAAGATGACACAGACAGTGTGCTTCTGTGTAAAGCAGAAGagaacatgcatttaaaaccaGAAAGCACTGAGAAGAGGCAAAGTATAAACACAACACCTAAAAAGCAAGAAGAGGAGCATTTATATGAAGTACCCGATGCTGTACTCACTAGTTCTACTGAATACATTTACGGAACAGAGTGCGTTAAAGAACAACTGAAGAAACTGGACAACATCACACTTCACATTGCTGTTACAGGATCAACTGGAGCAGGAAAATCCAGCTTTATCAATGCAATACGAGGTCTGAAACCGGACGACGTCAATGCAGCTCCCACAGGGGTGACTGAGACGACAATGACGTCAACACTGTACACACATCCTACAATGCCCAGTGTAAAATTATGGGATCTGCCAGGGACCGGAAGTCCCAAATTTAGAGCCAAAAAATACCTAAAGGATGTGAAACTTGACACCTTTGacttcttcatcatcatctcctCAGAGAGATTCAAGGAAAACGACATCCTGCTGGCTAAAGCAattaaagagaagaagaagTTGTTCTACTTTCTCCGCTCGAAGATTGACAATGACATCCAAGCAGAATCTAAAAGGAAAGACTTTGATGAGCAGAAAGTTCTCACAGATATTCGTGAGGACTGCCATAGAAACCTTAAGGGCATGGATAACCCCCAAATTTTCCTAATTTCCTCTTTTGAATTGCACAAATACGATTTTCAAACCCTTGTCGACACACTGGAGGAGCAGCTACCTGCTCACAAGAGAAATGCTCTGATTTTGTCCTTGCCAATATACTCCTCCAAGATCTTGGATGAGAAGATCGAACTGTTTATGAAGCAAACCTGGTCAGCAGCCGTCGCTTCTGGTTCCATCGCAGTGGCTCCAGTGCCTGGTCTTTCCATTGCTTGTGATGCTGCCATTTTACTGGCTTTCTTCACCAAGTGCTACAATGCTTTCGGGCTGGATGATGGATCAATAGATAAGCTTTCAGTGAGAGTCAACAATCCATCCCTCAAATCTGTAAGGAAGTCACCTCTAGTGATCGCTATTGGGCAAAAGAAACTCAGTAATAAGGAGCTAGCAGCACTGACAAATAGAGAAGCAGCTATTAAATTTGCGTGGAGCATGGTTCCTGTTGTAGGAAGTAAAAAAACTGCAGAAATGTCTTACTTCACAACACTGAACCTTCTGCGAGCAGGAGTTCAGGATCTCGCTGATACAGCCAAAGAAGTGCTGAAAGTGGCAGGTCTGACTGATGTCTACTGAAATCACAGACTGAGATCAGTCAAGAGGTCACGTCATTGGTCATTTTTGTTAAGTGCAGTCACATTCATTCATAACATACTCAGTGCTGTTCCCGTTCAAGAAGCTGAGCTGCATGCATGCATCTACTGACTGTTCTGAACATGTGTTTCTTTATTATCTGGAAAATGTATGGcttaaattgcatttgttaattGATTTAGACCTACATCCTATAAGACATGGaagaaaatgtgttgtttgttaGAATGTGTGCTGAGTGTGTGTAGAAACTACTTAactatttactatatatatatatttatataactgttTAACTGAATCTAGGCACAATTAGCTGGCAGTCTGATTTTCCCTTTTTTGGCTAATAAAGAATTGAAa

Function

NR:

description
PREDICTED: interferon-inducible GTPase 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260805.1 True 2950 mRNA 0.40 2 16324175 16327955

Neighbor

gene id symbol gene type direction distance location
irge4 LOC107657702,LOC107723472,LOC107593663 coding downstream 387 16319159 ~ 16323788 (-)
bcl3 LOC107715119,LOC107596570,LOC107723427,LOC107593656 coding downstream 22393 16280887 ~ 16301782 (-)
ddx61 ddx61,LOC107699492,LOC107714973,LOC107657698,LOC107593657,LOC107595651,LOC107723428,LOC108428944,LOC103044136 coding downstream 43947 16273280 ~ 16280228 (-)
tomm40 LOC107723430,LOC107593658,LOC107657699,LOC107699493,LOC108438269,LOC107714943 coding downstream 51705 16267038 ~ 16272470 (-)
derl1 derl1,LOC107593655,LOC107657695,LOC107714924,LOC107736822,LOC107699495,LOC107595682 coding downstream 59633 16256482 ~ 16264542 (-)
LOC122360110 LOC107723470,LOC107699447,LOC107657603,LOC107593661,LOC107581109 coding upstream 4472 16332427 ~ 16336832 (-)
LOC122361092 LOC107723470,LOC107657603,LOC107699447,LOC107593661,LOC107581109 coding upstream 14555 16342510 ~ 16344956 (-)
tmem145 tmem145,LOC107706472,LOC107723540,LOC107657707,LOC107595744,LOC107593664 coding upstream 32961 16360916 ~ 16378010 (-)
lipeb LOC107706458,LOC107699484,LOC107595727,LOC107723485,LOC107657706,LOC107593665 coding upstream 53370 16381325 ~ 16402875 (-)
cd79a NA coding upstream 75014 16402969 ~ 16405653 (-)
G113281 NA non-coding downstream 127498 16120326 ~ 16196677 (-)
G113280 jarid2a,LOC107593646,LOC107657689,LOC107714830,LOC107699452,LOC107595576 non-coding downstream 128279 16194029 ~ 16195896 (-)
G113300 NA non-coding downstream 131486 16190862 ~ 16192689 (-)
LOC122361072 LOC107723533,LOC107657692 non-coding downstream 256630 16066166 ~ 16067545 (-)
LOC122360541 NA non-coding downstream 337991 15984741 ~ 15986184 (-)
G113325 prss59.1,LOC107595716,LOC107739933,LOC107657703,LOC107735769,LOC107699485,LOC107593705,LOC101066992,LOC108431067,LOC102234122 non-coding upstream 24315 16352270 ~ 16357623 (-)
LOC122360769 NA non-coding upstream 160163 16488118 ~ 16494739 (-)
G113405 NA non-coding upstream 224653 16552608 ~ 16553858 (-)
G113433 NA non-coding upstream 260730 16588685 ~ 16589614 (-)
G113439 epb41l4b,LOC107706320,LOC107687806,LOC107596310 non-coding upstream 278759 16606714 ~ 16607680 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 84669 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 95709 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 182940 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 310424 16012964 ~ 16013751 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other downstream 317704 16001313 ~ 16006471 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other upstream 258129 16586084 ~ 16682178 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 1484415 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1867516 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 2029462 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 2164671 18492626 ~ 18520287 (-)

Expression


Co-expression Network