zdhhc3a (zdhhc3a,zdhhc3,LOC107679645,LOC107600619,LOC107666804,LOC105908916)


Basic Information

Item Value
gene id zdhhc3a
gene name zdhhc3a,zdhhc3,LOC107679645,LOC107600619,LOC107666804,LOC105908916
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21972672 ~ 21982803 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260809.1
GCGCCTCTAGTGAAAGGGAGGTGTGGCTATCAGTTTCTCCAGAGAAGGGAGGAGCTGGCTCCGCACAAAAATGCAGCATTTCGCCAGCCCCCGTGCAATAATCGGGTAAACCACAGTTTTTGTTAAAACACTAATCTCAGATATGTTTTCCTGGTAGCGTGATCCATGCATTACTGGATCTTCTCGGCCTTGAGTGGGCGAGCAAAAGCGAGGAGCACCACCAGTGTCGCCAAATATGATGGCATCTCTGTGGTAGGATGAGAAGTCCAGTGCCGCGTTTCAGGGACGTCGAGAGGCAGGCCAGTGGCCTGCAGCCCGCACAGTGTCTTCCTCCCTGTCATGAGCAACAGACCAACATGTGGTTCATTAAAGACGCCTGTGGCATCGTTTGTGCGATCATCACCTGGCTTCTCGTCTTCTTTGCTGAGTTCGTCGTGTTGTTCGTCATGCTGATTCCATCGAAGAACCTCACCTACAGCCTGGTGAATGGCACCATCTTCAACAGCCTGGCCTTCCTCGCCTTGGCGTCTCATTTCAGAGCCATGTGCACTGACCCGGGAGCCGTGCCAAAGGGCAATGCCACAAAGGAGTACATCGAGAGCTTGCAGCTGAAGCCAGGCCAGGTGGTTTACAAATGTCCCAAGTGCTGCAGTATTAAACCAGATAGAGCTCACCACTGCAGTGTTTGTAAGCGCTGTATACGGAAGATGGATCATCATTGCCCTTGGGTAAACAATTGTGTCGGGGAAAATAACCAGAAGTACTTTGTGCTTTTCACAatgTACATATCCCTGATCTCTCTGCATTCCTTGGTCATGGTGGTCTTTCATTTTCTCTACTGCTTTGAAGATGACTGGACAAAGTGCAGTACCTTCTCCCCTCCAGCCACtgtcatcctcctcatcctcctgtgCTTTGAGggcctcctcttcctcatcttcaCCTCTGTGATGTTTGGCACCCAAATCCATTCCATCTGCACAGATGAGACGggcatTGAAAAGTTGAAGCGTGAAGACCCTACATGGGAGAAGGTAACATCCTGGGAAGCTATGAAGACAGCGTTCGGAGGCCCTCTGGCTGTGGACTGGTTTAGTCCTTTCACAGATCTCTCATGCCAGAAAGATACTTCGGATCCTGTTCCCGTGTTCCCCCAGGGTGAAATCATTGAGGAAGATGTGATTGAGATTCCTTTGGAGCCTCATTAGATCAAAAACCCTGAGACTCAAGAGACCCGAGACTCCCATTTCCTGCTTTTGGGCTTTCAAAGAAACTACTGTGGACGTTTGAATAtggacttgtttttttttaacctgtggAAAAGACATTCACATACTGTACCAAAGTGCCTTACCAAAACTACAGCTAACTCTTCTAAAGAGAAACTTATACTGTGCATAGAGACAGTGACACATAACATGTACTTCATTATGCCAGCTGTTCCTGGAACAGTGACGTCTTTTAGTTTGGTGTATCTATATGTTTGATAAGGTATAGGATATTAATAATACCGGATAAAGTAACTGTAAGTGAATGCTTTCATGTAGGGCACTTATACAATTACAGTTAAATAGTCGTGTATGTATGAAATGCCTTAATATATcaagaattcatttatttttaatggccTGGCATTGAAACACTATACAATGGCTGTAAACCAGGAATACACAAGTTCAGATGcagaatttgaaaatataacatATGGTGCTCATTTGTAGGCCTTTCGGGCCTTTTCCATAATTAGCAAAAATGCATGCAAGACTTACTATATCATACCAGCATTTCACTGatgttttacaattttattgttctttctttttattgtatttatggCCTTCTTTTCCCTTTAACTTTCCATTACTGGCTACAttattgttatgttatgttCGGATTTTTTCCATTACCTGATGTTTCCCATGGATGCACACTTTCAATTTAAGCTTCTTCAAATAAATTTGCTGTTTTTACAAGTtca
>XM_043260810.1
TGCGCCTCTAGTGAAAGGGAGGTGTGGCTATCAGTTTCTCCAGAGAAGGGAGGAGCTGGCTCCGCACAAAAATGCAGCATTTCGCCAGCCCCCGTGCAATAATCGGGTAAACCACAGTTTTTGTTAAAACACTAATCTCAGATATGTTTTCCTGGTAGCGTGATCCATGCATTACTGGATCTTCTCGGCCTTGAGTGGGCGAGCAAAAGCGAGGAGCACCACCAGTGTCGCCAAATATGATGGCATCTCTGTGGTAGGATGAGAAGTCCAGTGCCGCGTTTCAGGGACGTCGAGAGGCAGGCCAGTGGCCTGCAGCCCGCACAGTGTCTTCCTCCCTGTCATGAGCAACAGACCAACATGTGGTTCATTAAAGACGCCTGTGGCATCGTTTGTGCGATCATCACCTGGCTTCTCGTCTTCTTTGCTGAGTTCGTCGTGTTGTTCGTCATGCTGATTCCATCGAAGAACCTCACCTACAGCCTGGTGAATGGCACCATCTTCAACAGCCTGGCCTTCCTCGCCTTGGCGTCTCATTTCAGAGCCATGTGCACTGACCCGGGAGCCGTGCCAAAGGGCAATGCCACAAAGGAGTACATCGAGAGCTTGCAGCTGAAGCCAGGCCAGGTGGTTTACAAATGTCCCAAGTGCTGCAGTATTAAACCAGATAGAGCTCACCACTGCAGTGTTTGTAAGCGCTGTATACGGAAGATGGATCATCATTGCCCTTGGGTAAACAATTGTGTCGGGGAAAATAACCAGAAGTACTTTGTGCTTTTCACAatgTACATATCCCTGATCTCTCTGCATTCCTTGGTCATGGTGGTCTTTCATTTTCTCTACTGCTTTGAAGATGACTGGACAAAGTGCAGTACCTTCTCCCCTCCAGCCACtgtcatcctcctcatcctcctgtgCTTTGAGggcctcctcttcctcatcttcaCCTCTGTGATGTTTGGCACCCAAATCCATTCCATCTGCACAGATGAGACGGGCATAGAGCAGTtgaaaaaggaagagagaagatgggctaaaaaaacaaaatggatgAACATGAAGGCGGTATTCGGACACCCCTTCTCGATAGCATGGTTTAGCCCGTTTTCCACACCCGACCACGGGAAAGCTGACCCCTACCAGTATGTGGTCTGAGCTCAGGAAGCCTTAAGCTAGAGACTCGAGTGCACTTGGACTTCCCTTATAAACGGCatcttttaatttgtttgtaattCCGAAAGAAACCGAGCATTTACCAGTGAGACTAAATCAccttcatcttcttctcttttttttttttttttttttttttcagggaacaAATCATTGCATATCCAATTATCCTTGCCtctacttatttttaattcagaacAGAAAGCGGATGCTTCATCATGTCACAGTCTTAAGCATCTCTGCCTAGCTACACCGAAATGAAGACGAATGTTGCGCAGATAATAGAAGCCAATTTATGCTAATATAATCGCTATTGTAATCTTGCCAGACTGTCCACAATGATAACCTATTTTCTGAAGGTACTTTTAAACaacctgttatttatttatttttttttttagaagtagCTACAATATAAGAGCACTGACAACCATTCaataaaatggtttattatgctgacaaaaaaaacaaaaaaacatttaagggCAGTTATTACCAAGGACGGTATCTATGATGATAACTATAAATCATTCTGTGAGAATATAGAAGTCCACTGTACGTCTATTTTATAACAGCGACGCCGAGGAACAATATCGTTGGAGTCACGACATGAAgctcatgaattattaaaaacagtgacagccaatcagaatgctCGAGCATTTCTAAAAGCACTTCTAAAAACAGAGCTGCTGTTAAGGacatatagttatagttatccTTATATTTATCCTTATTGGTAAACAGGCCTTAACATTATTGACACTGGctgtatacaaaatataaaaagtatataaacgACATGGGAAGTTTCACAGGGGTATAAAAGTTCTGATAAAGCTTGAATTCAAGCAATTCTATACTTTATAATGCAGTCATGATATTTGATTATAAATTGgtgtattatttttgaaaatcctAATAAACAAGAGACAGTAttgatcaaattattattattttttacattcacaAGTATTGTAGAACTGAATTCCATTATCAGTGCATTGTCGGCTCATTTCTACATCCTAATTCttaacattgaaaatatttcaacttATAACAATAGTTATTTCATTAATGCAATGAATGTGTTTTGAGATATCATGAGTACATTTGCTGTTACACACAAGATTTTGAGTGCTAACAGTACTGATGTTACTCATCTGCCCTATCAGATTTACTTCCTATACTCTATAcacactgtacttttttttttttttggagctgGTTTACTTGGTATGTTTCTATAAACGTGGTTTGCAGAAATGTTTAAGAAAGGAACAGGCttaaaaattgtatgtttttgaaaaccTAATTGATTTAACCATTGTTTGCCATTGTTTCGgttaattgcattttacattttattaataatatacatttttgttatgatGAACGGATGATATATGCTTGAACTTTTAGGTGTGTATGAAAAAGACAATCATTCTGTTCTTCTTTGACAAatggtaaataattaaaaacctGAACACTT

Function

symbol description
zdhhc3a Enables S-acyltransferase activity. Involved in peptidyl-L-cysteine S-palmitoylation. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC3 (zinc finger DHHC-type palmitoyltransferase 3).
zdhhc3 Enables palmitoyltransferase activity. Involved in several processes, including TRAIL-activated apoptotic signaling pathway; protein localization to membrane; and protein localization to photoreceptor outer segment. Located in Golgi apparatus.

NR:

description
palmitoyltransferase ZDHHC3 isoform X2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K20029 ZDHHC3_7_25; palmitoyltransferase ZDHHC3/7/25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260809.1 False 1978 mRNA 0.44 7 21972672 21982802
XM_043260810.1 True 2662 mRNA 0.40 7 21974492 21982803

Neighbor

gene id symbol gene type direction distance location
kiaa1143 kiaa1143,zgc:77056,LOC107713807,LOC107600662,LOC107551194,LOC107679647 coding downstream 1965 21968837 ~ 21970707 (-)
osbpl10b osbpl10,LOC107600617,LOC107713824,LOC107551176,LOC107705753,LOC107668315 coding downstream 11181 21922962 ~ 21961491 (-)
hint3 hint3 coding downstream 315952 21654319 ~ 21656720 (-)
trmt11 trmt11,LOC107668323,LOC107713829,LOC107567767,LOC107730191,LOC107666854,LOC107600515 coding downstream 321561 21640097 ~ 21651111 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding downstream 540865 21412868 ~ 21431807 (-)
sybu LOC107666828,LOC107713821,LOC107705165,LOC107551189,LOC107679650 coding upstream 8471 21991274 ~ 22001056 (-)
trhra trhra,LOC107600665,LOC107705826,LOC107666857,LOC107551182,LOC107679641,LOC107713802 coding upstream 141893 22124696 ~ 22129509 (-)
emc2 emc2,LOC107600623,LOC107666844,LOC107679651 coding upstream 196848 22179651 ~ 22208604 (-)
cd83 cd83,LOC107705228,LOC107666866 coding upstream 347376 22330179 ~ 22332034 (-)
zgc:113232 zgc:113232,LOC107705846,LOC107666867,LOC107600626,LOC107756222,LOC108437324 coding upstream 352360 22335163 ~ 22344100 (-)
G115170 NA non-coding downstream 98621 21873826 ~ 21874051 (-)
G115155 NA non-coding downstream 147235 21825198 ~ 21825437 (-)
G115098 NA non-coding downstream 583525 21388815 ~ 21389147 (-)
G115051 NA non-coding downstream 641314 21331012 ~ 21331358 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 657926 21283464 ~ 21314746 (-)
G115262 NA non-coding upstream 247437 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 700624 22683427 ~ 22683638 (-)
G115496 NA non-coding upstream 790963 22773766 ~ 22774032 (-)
G115536 bnipl,LOC107755792,LOC107556108,LOC107755808 non-coding upstream 902912 22885715 ~ 22888001 (-)
G115548 LOC107704994,LOC107705391,LOC107588482,LOC107755744,LOC107700704,LOC107556105 non-coding upstream 928076 22910879 ~ 22911323 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 4137 21964855 ~ 21968535 (-)
G115149 NA other downstream 168868 21801475 ~ 21803804 (-)
G115141 NA other downstream 267713 21704018 ~ 21704959 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other downstream 358469 21605958 ~ 21614203 (-)
G115116 NA other downstream 411456 21560221 ~ 21561216 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other upstream 104838 22087641 ~ 22089092 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other upstream 909299 22892102 ~ 22901187 (-)
G115554 NA other upstream 949824 22932627 ~ 22933967 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 1537005 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 1600190 23582993 ~ 23609841 (-)

Expression


Co-expression Network