LOC122360322 (frrs1l,LOC107595962,LOC107657722,LOC107723406,LOC107593684)


Basic Information

Item Value
gene id LOC122360322
gene name frrs1l,LOC107595962,LOC107657722,LOC107723406,LOC107593684
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16799360 ~ 16804107 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260821.1
CGGCACCCGAGCCTCCAGCCTCTCAGCGCCCCCTCCCCCGCGGAGCAACCCAAACGTTTTTTTATCATGAAAGCGATTTAATTAGCtacgtattattattagttatcaGCGTGAGCATTAGTACTGGAATGCGACGACCAGTAAATCAGACCCGAGTCTCTTCGCGCGAACAATAACAAGTATCGTATCATTAGGTCCAACGCGTCCAGTCATGTTTCTTCTGCATCCGCTGCTGCAGATCTCCGTTTTGCTGGATGCGGTTTCTGCCAGCCCTACCGACGATAATGTGCTGCGGGCCGGCCATGGAGATCACGGAGAGCCGGGGCACGAAGAACCCCATAAGGATTCCTACAGCACATTCGCCTCCGAGTTCCTCGAGTCCAGATACCTCTCAGACGAAGGTTACCCCTTCCCAACTGCACCCCCTGTAGACCCATTTGCCCGCATAAAAGTTAGCGACTGTGGAATAACCAAAGGATGCATCAGATATGGCAAACCAGGCTGTGACGCAGAGACCTGTGACTACTTCCTGAGTTTCAGACGCATTGGCACAGATGTGGAATTCGAGATGAGTGCAGACACTGATGGATGGGTCGCCGTCGGTTTCTCCTCTGACAAAAAAATGGGAGGTGATGACGTCATGGGTTGTGTCCATGACGATAACGGACGTGTGCGGATACATCATTTCTACAATGTGGGCCAGTGGGCCAAAGAGATCAAGCGCAACCCGGCACGGGACGAGGAGGGCATCTTTGAAAACAACCGTGTCACGTGCCGCTTCAAGCGGCCTCTTCACGTGCCTCGGGAGGAAACGCTGGTGGACCTGCACCTCAGCTGGTACTATCTGTTCGCTTGGGGACCTGCCATACAAGGTTCCATCACAAGGCATGACATCGACTCCCCACCGGTGTCAGATCGCATGATTAGCATCTATAAATATGAGGACATTTTCATGCCTGCCACGGCCTATCAGACATTCTCCTCTCCCTTTTGCCTCCTCCTCATTGTTGCTCTTACCTTCTACCTGCTGATGGGCACACCATAACCAGCAAAGCCATGTCACCGAGAGGAGAAATTAGTACAGCAAACTCAAACTATGGAGCCACTATAGCACGACTTTGTGCCAACTTAACAGTATTACGAACAAGCAGCAATAAATTGGAATTCTATAATATCCTCAATCTACGTACACTAGAAAGGTATTTGGACTGTTTCCACACGTGTTAATATTCAGTTAGATACAAGCAGTGATTTCTCATTTGGAGGAGAGAAGGTCAACCATACAcatatttattactatatattttattttgataaatgagTAGAGAAACATCAAATGGTGCATGTTATTGTAGGTAGGTTATGGTCAGTCTACAATAGTTGAAAAAATCTGAgtcacattcattttaatattcagtatACCTATAGTGCTATATAAAATTTTTGCATTAAGGAAAGCTGTAGAACGTCAAACCAAGCAGCTGTCAGTCGTAGCTGtgaataaactttaaaataaattcaaatttaaaccCATTGCGAAATCTATGCGGGGAAATCTTTCGCCCTCATTTAAAATTCCAAAACACAGTGACTTACATTGAAATGACTAAAtttcacaaacaaacattttctgatcAGTGATAAATGTGACCGTATCTCTACAGTGGCACATATCATGACACACTGTGTCCCTCTACTGCACTCTAAGGAGAAATGAATTGCCTCATTTTAGTGAAAGGAATATGTTTTGCCAAATCTCAGTAGAGGTGATCTGCTGTTTGTAGTTGCCCGCTATCCATTGTTTTCTAGTATATTACAGTTCTGATTAAGGCTGTGGATTTCAAACTTATGTAAATTAATGCCTGTGACTACGCAACTTACAGCACTACATAATTTGCCctacagcacaaacacacatgcaaagtATTCATAAAACATCACTGCCTTCCAGTCAGCCAGCATTGCCAGTTCAGTATTTGATGATGCATGCCAGCAAACAGCCTCATCTGAGCCATTTAGATCAGGAACAGAACCAGTCCAGGAGAGAGTCGTCTGGTTTTTATTCCAGTGATTTGCAGACTTCCTACACCAAGGACTTCATGCCAttgtaaaacacacaaatagtCAAAAAACAGATTGCTGCCTGTGTAAGATTTAGATCACACCAGTTAATTATCTGGAAATGTTCTGGAATAAAATTTGTTTAGCAGACTAAAGAGCACCATgtaaaagatgtttaaaataggtatttacttttaaatacagGTTATATTCACCTTAAGGTATATGAGGAAATGTACTTGAGAGAGTGATGCGATTCACTTTTGGTGTGTGCCGGCCAGAGATAATCATGTTATGTAGCATGAATGGAAACATTTGTATGCCAGTGGTCAAGGAACagtatgttatattttaatatacttttaaaatgtcgACAGTGTTAGAGAATATGCAATAATGAGTGTGCATAGTAAAGGACTGTGCACCATTggcatttgaaatatttgtcatACAGTCTCCTACATCATTAGCAGCTTACATACATTCTGACAAATTTACTGTGAATTCTTGCTCTAATGGGATAAAAGATACCTGGTTGATGGTCCTGAACACAACGCATACTGCACTTTTTAATAAAGCTATGAAAATCAGCTGAAATGTGTACTGTTGTTATGTTTGTCTGGGTAAAATGAGAACGTTTGTCTGATCTTGATGTATTTGTCATGACATGGCACCttgaaaaatagtaataaataaaacaatgaaatatctGCTCACTAA

Function

symbol description
frrs1l Predicted to act upstream of or within regulation of glutamate receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: DOMON domain-containing protein FRRS1L-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260821.1 True 2781 mRNA 0.42 5 16799360 16804107

Neighbor

gene id symbol gene type direction distance location
tmem245 LOC107687814,LOC107595951,LOC107706205,LOC107723436,LOC107657721,LOC107593683 coding downstream 160 16784020 ~ 16799200 (-)
ino80c ino80c,LOC107706244,LOC107723410,LOC107657632,LOC107596621,LOC107593731 coding downstream 100511 16697321 ~ 16698849 (-)
pdp1 pdp1,LOC107706250,LOC107595893,LOC107687812,LOC107593682,LOC107723551 coding downstream 106232 16688215 ~ 16693128 (-)
rnf41l rnf41l,LOC107687809,LOC107723454,LOC107593678,LOC108443277 coding downstream 149047 16646546 ~ 16650313 (-)
sgk2b sgk2b,LOC107687822,LOC107595908,LOC107706345 coding downstream 223924 16571366 ~ 16575436 (-)
alg2 alg2,LOC107706186,LOC107595974,LOC107723517,LOC107687815 coding upstream 13619 16817726 ~ 16820755 (-)
erp44 erp44,LOC107706132,LOC107593692,LOC107723539,LOC107596038 coding upstream 111411 16915518 ~ 16928686 (-)
tex10 tex10,LOC107657731,LOC107723457,LOC107706105,LOC107596045,LOC107593696,LOC107689903 coding upstream 147072 16951179 ~ 16968820 (-)
rbm12ba LOC107706078,LOC107596631,LOC107689919,LOC107657732,LOC107723523,LOC107593697 coding upstream 174665 16978772 ~ 16981410 (-)
trnat-ugu_49 NA coding upstream 186195 16990302 ~ 16990374 (-)
LOC122360493 NA non-coding downstream 62078 16724418 ~ 16737282 (-)
G113473 NA non-coding downstream 105070 16693930 ~ 16694290 (-)
G113470 cdh17,LOC107595837,LOC107706528,LOC107687825 non-coding downstream 119248 16679684 ~ 16680112 (-)
G113439 epb41l4b,LOC107706320,LOC107687806,LOC107596310 non-coding downstream 191680 16606714 ~ 16607680 (-)
G113433 NA non-coding downstream 209746 16588685 ~ 16589614 (-)
G113504 NA non-coding upstream 17523 16821630 ~ 16822180 (-)
G113569 LOC107706170,LOC107657725,LOC107593690,LOC107723503 non-coding upstream 84214 16888321 ~ 16892578 (-)
G113567 nr4a3,LOC107687818,LOC107706170,LOC107723503 non-coding upstream 90245 16894352 ~ 16895923 (-)
G113587 NA non-coding upstream 106228 16910335 ~ 16911882 (-)
G113588 NA non-coding upstream 109553 16913660 ~ 16913962 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other downstream 117182 16586084 ~ 16682178 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 559854 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 570894 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 658125 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 785609 16012964 ~ 16013751 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 1008263 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1391364 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 1553310 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 1688519 18492626 ~ 18520287 (-)
G114236 LOC101883708,LOC105900568,LOC106574835 other upstream 1845412 18649519 ~ 18650609 (-)

Expression


Co-expression Network