cobl (LOC107684220,LOC107551210,LOC107746964)


Basic Information

Item Value
gene id cobl
gene name LOC107684220,LOC107551210,LOC107746964
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10014939 ~ 10054825 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260850.1
GCTCGAGGTCCAAGCATTTTGGCGTTCTCACATGCTTTATGCTTCTCATTGTCTTCGAGGATCATAGACGTTCGCCTTCTGTGTGGTTCCTGGACACGGACTACAGACAGACTCTCACGGCTGCTTTGACAGTAGAGGAGAATGAAGGCCAAGGCCCCACCTCCACCTCACCCCTCAGCCTGCCCCCGCAGGATCTTCCGTAATGCTGTTCCTGATGGAGGAGGATCTTCAGTGGGAGACAGCAAGGAAAACATGCTTCGACCCTCTGTGGACCTCCATATCAGTCTGCCTTCAGGGTATCAGACCACCGTCAATGTGGATGGCAGAAAAGCTCTGATGGATTTGTTGGTGGATCTGTGCAGTCAGTATCATCTGAATCCAACATATCATACCCTGGAGCTGCTGTCACCCGATGCTCAACCTGTCATTTTTAAGCCCAACGCCCTGCTGGGCGCCCTGGACGTCTCCTGCGCCCTGATCAAAGAACGAGTGCTGGAGGACAAGGTGATCCGGAAACCTCCACCCAAGATGCCAGAGAAAACTGTGCGTTTGGTGGTAAACTATCACCGCAGTCAGAAAGCAGTTGTTCGTGTAAATCCACTGGTCCCACTGCATACCCTGGTGCCTGTGATTTGTCAGAAGTGCGAGTTTGACTCGGCCCATGTCTTGCTGTTCAAAGACAATATCAGCCATCAACAGCTGGACCTGGACAAGTGCCTGAGCGAGCTGGGTATCAGAGAACTCTATGTGCTGGATCAAACACTAGCTGAATCTCTTCACTCCAACAGTCTGAGTGGATCAGAGAAAAAGAGCCTGCTGGGCTTCCTCAAGTTTAATCGCAGGAAATCAAAGGGTATGTCGGTTGCAAGCAGTCCATGTGTGGAGACCCGTCCTAGCACTCTGGGTCAGTCTCAGTCTGTGATGAACATCTCCAAGATGTCCCCAAAAGTGGAATTAAAGAAGCGCAGAGCTCCAGCACCCCCACCAGCTCCCACACAGACTTTACCACTGACATCCCAGATAAACCTCAGCTCTGCATCCTCACATAACCATCTTAAGAAACGGAAGGCTCCAGCACCTCCACCCACACCATCGCCCGAACCAGTTATTTCCACTTCTGTGCCTACTGAATCTGTGCGGACCCCCTGCATCCCGGTGCCAGTTGAAAGGACCCTGCTGCCAGTTCCCAGAGCCTCAACCCCAGCCGATGATTCTGATTTGAGCCATAGTATTGAGGATTCAGAGCCCGCCAGGTCCATCTGTAGTAGCTCCAGCAGTGATATAGCTGCAGGTTCCAGCAGCAGTAGTTTAGCTGAAGAACCTGTAACACATCAGGTTCATGTCATAGCTGCATACACCACATATACACCAGAACCTGAACCTGAAcctgaacttaaacctgaaccTACACCTGAACGCAAGGAAGAAGCAGCTCGTCAGACTCCAGAACCACCTCCTCAAGAACCAAGTCCAAGTTCAAAGGATCAAATGGCAGAAGACCCAGAGCTAGAGATGGAGCTCAAAATGGAAGAGATGGAGAATAACCGCAATAGTGGAATAGCCTGGCTGCATTCAGCACATGAGTCTGTGTCAGAGAATATGGCAGAGCAGGACGTGGAAACAACATCTGTCGCCAGCAATGAGAGTTTTGCAGACCAAGGTTACGCAGCATCAGAGGGCATGGCTGAGGAGTCCGTCCCAGTCTCTCCCTCCGAAAGGATGCAATCTGTGTCACCCATGTCTTTAAACAGTGGCTCAGCTCTACCTTGTAACCAGTCCAAAGACTCTTCAAGTGACAGTGATGAGGGTTGTGCGACCTGGGGCTCTAGACAAAGTACCGGAAATATTCAGCGAGAACATCAGTCAATCAAGAGACAAAATGGATATGAAGAAGACCCAGAGATTACTGCTCAGATTCAGCTTACCCTGGCCGATCTAGATGCAAATCTGACAGATGTTAATAACTCAGAAGGAACATCTGTGTTTGTGGATGAAGAAATACCTGTGTCTATTGTTGACTTGGACATTCCAGTGACCTCCATTGATGAAATTCTTGATGATGACCAGTGCAGCTCGAGTGAGTGCGAGGCAGCATTGTTACACAGCTCTCAAAACATCACCAGCCAATTGTGTGCACCAAGTGAAGCTAtcgaaaacaaaaacaacaacgcCTGCGGGACAGAAGAGAAAAAGTCTGTTCCCGAAAGAAGTCCATCCCCAGACATAAAGAAGCAGTCGCAAGAGACTACACTCAAAGTTATTGAGAAAACCATGAATCCATCTCCAACCAGTGAGAGGCCATCACAAGATACTAAACTTGTGGAGCAAAAATTGGACAGTATGAAACAGAAGACTGTCTTTAACTCTGACGCTGTAACTGAAGAACTGAAGAAGGTATCACAGAAGTCCCAAAGTTTTGTGCGTCCTGTTCAAAGTGTTCAAAAGGTTCCTGATGAGAGACAGACGACAGCACCTATGGTTCAGAGGTTCAGTAAAGAGACTTCTTATGAAGAAAGGACACCTATTAACAGAGTCCCAACAATTCAGGGTAAGATCACCCAGAGTTCCTTCTCTCGTTTTGGAATGAAAACCTTTACAGTCATCCCTCCCAAACCGACTGTGTCTCAGACCAAGCCTACAGGCTCTCTAGTCATAGGTGCCATCAAGATTGATGAACAGGGCAACATGGTTACACAAAAACAGATTTCCACTGGCCCAAAGAAAAATGGCAATCCCAGTGTTGAAACTAGTACAGACACATCCCCATTGGACAAAGCCAAAGCATTCTGGAGCACTGCAGAAAAGCAAGACCAATCAACTACGATCAACCGGGGACCCATAGTAAACAATAAAGATACTGATGTTTTCAAACCCTCGATTGTTTCTGGAGTCTCTCATCTTTCAGTGGAAACACCTCCCGAAGAAACACACAAAGAGGTCATTATATTGGAAAGGAAGACCATATCTGTAGTGGCAAGTAAGCCTTCATTCCCAGAGCCTACAGAAAATTCCTCTTTAACAGCTGAAAGGCGAGATTACTCTTTTCTTATACCCTCCAGAAGAACCTCCAGCCAATACGTAGCTTCAGCTATTGCTAAAAACAGCAGCATTCCCAACACTAAAACAGACATCAAGCAGGCACCATCGGAGTCCATCGTTGGTGTTCAAAAACCTGTAAATCAACAGTTTAATAGTGAGTTTAGGCTTGCTGCTACTTATAAACCCCCTGAAAATGTAGTGCCTTCTTTTGGAAACCCTAAACACCTGCAAAGTTACCTCAGTCATGTTACAGAAAAGCCAGCAAGTTCTGAGAGAATAAGCAGTGTTGAAAAAGGCACTGTGCATGGGGAAGACAGAACCAAATCTCTGGACTCACAtcctttaaataacaaaatccagCCCTCCAAACACATGTCTGTTCACATTAAACCCTTGGAATCTTCCTCTGAAGAAGCCACATCAATCAATAAGTTCCCAGACACCTCTGCCAGACAGACGCCAAAAGACACCACACGTCCACCACTTACAAAGAAGCCAGAGTTAGACAAATCTGAGATTCCATCTGAACCAAACCAGGGTAACTTGTTTGGACCGGTTAGGAAGTTCAAGCCTGTTATTTTTAAGCCTGTACAGAAGGAAATGTCTGTCCATAGCTCGCTAATGGAGGCCATACAGTCTGGAGAGGGCATTGAACGGCTCAAAAAGGTGTCTGACTTGTCTACAAAGAGCATAGTTAGAGAGCCGTCTTACAGTGATGCAGACAATGAGCGTTCAGCGCTTCTTTCAGCATTAAGAGCTCCAAGCAACTCTGCAAGACTGAAGAAGACCAAATCAGGAGCAGCTAAGGAGTTGGAGCAGCTCAGGAAGCTTGAGGAAGAGAGAAATGTCTCACCTCCTCCCACTTCTTCTCCTGCTTTTGTGCCACCCCCACCTCCAGTCTTTGTTCCTCCCCCACCTCCACCTTCAGGTCCAGTCAAGCCCCCTCTAGTGCTGCCTCCTGGAGAAAACCCAGAGGCGGCCCGAGAGGCTCTTCTGGAGGCCATTCGTTCAGGCTCTGGGGCTCAAAGACTGAGGAAGGTCCCTGTCACACAGACAAGAAGGCAAGTGAATGGAAGACTTGGAACCATCCAGGCAACATCACCGCTTTCTTATGGACACTAGAAACCTTCACTGGATCACCGTTTGGGTTTACCCATCGCCAAATCTGGTGTTTAAGCACTTGTGCTAATGCTGTTGCAGATAATGCTAACACAATATTCACAGCCTTCTTTATTTATAGTGATATGCTGCTTCACATCAGTGCCAATACTAATTTGCCTAGTTTCAGGCAGTTTATGTCCTACTGACATTCTAATGACATGGAAGTTCTTTGTTAATGCTGctttgaggtgttttttttcatatgtctGCCTGACTTCTATATCTCTATCAGTATTATACCTGAATATATTATGCAGGTATTTGCTGTTGCATCACAGTATAGGTGTTGGGCTGCAATTGAATCCACCTGCCAATCACATCAGtctgttttttgatttttttttttaaagaaacactaagtggtaaaaacactgcaatttttatttaatcgtTATTATAAAGGTGTTTctctaaatgttttgttattttacacatatatatatatatatatacagtacataatgATGATTAgatcacaaacttttttttattagaaatgtatcGACAACGAACCCTTCTCGACACTCTATGAAGCATTGCGCAGTAGATAAAATGCACTTTCTCTAAAACTAACTCTTACAGATTATTTTGAAAGCCTTGTAGATAAGTATGATTGGACATAACATAATCAATTCCTTTTTATCAGTCTGCTAAAGAACTGTGATTTAGAGCTGTCATCTTAAAATCATACACTAATTAgaataaattgtttaatatatttacacaagctgtaaatgtatttatgttgttGCAATTTAGGATTGTAGACTATATGACTGTATGCCTGTACAGTGGTAATCTTATTGAAGAAATGACTTAGATATAAGTCAACAGGtggatattttgtataaatatatctgATACTAATATAGCAAGTTTCAAATCTGGCACTAAAGCATTTGTgtaaggaaaatattttttaaataatgcttttgtaatttttttttttgattgcagCACAAATTGAATCAAACttgtaaatcaataaaaatattttacagtcttTCCA

Function

NR:

description
PREDICTED: protein cordon-bleu-like isoform X2

GO:

id name namespace
GO:0060088 auditory receptor cell stereocilium organization biological_process
GO:0003146 heart jogging biological_process
GO:0060271 cilium assembly biological_process
GO:0001947 heart looping biological_process
GO:0042995 cell projection cellular_component
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K18623 COBL; protein cordon-bleu

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260850.1 True 5209 mRNA 0.44 14 10014939 10054825

Neighbor

gene id symbol gene type direction distance location
grb10b grb10b,LOC107746967,LOC107551212,LOC107751877,LOC107601668,LOC107704094 coding downstream 4189 9947351 ~ 10010750 (-)
ddc ddc,LOC107551213,LOC107746968,LOC107601670,LOC107751878,LOC106605416 coding downstream 69333 9929336 ~ 9945606 (-)
entpd3 entpd3,LOC107732432,LOC107657573,LOC107751912,LOC107704086 coding downstream 100597 9904473 ~ 9914342 (-)
snrka snrka,snrk,LOC107723077,LOC107551216,LOC107657578,LOC107601674,LOC107704097,LOC107751880 coding downstream 156308 9818586 ~ 9858631 (-)
abhd5a abhd5,abhd5a,LOC107657580,LOC107751913,LOC107704099,LOC107723076 coding downstream 227847 9778317 ~ 9787092 (-)
triob triob,LOC107746974,LOC108429234,LOC106579830,LOC106605411 coding upstream 44738 10099563 ~ 10194294 (-)
adcy2a adcy2a,LOC107664610,LOC107551198,LOC108429235,LOC108272199 coding upstream 232261 10287086 ~ 10354596 (-)
LOC122361022 LOC107572826,LOC106588695 coding upstream 309596 10364421 ~ 10372271 (-)
ice1 LOC107746963,LOC107691875,LOC107566277,LOC107735420 coding upstream 317586 10372411 ~ 10386594 (-)
prpf3 prpf3,LOC107677690,LOC107719195 coding upstream 337009 10391834 ~ 10403036 (-)
G111097 NA non-coding downstream 139275 9875392 ~ 9875664 (-)
G111048 NA non-coding downstream 259959 9754315 ~ 9754980 (-)
G111045 NA non-coding downstream 338434 9674864 ~ 9676505 (-)
G111025 NA non-coding downstream 390820 9623700 ~ 9624119 (-)
G111024 NA non-coding downstream 394486 9620119 ~ 9620453 (-)
G111298 NA non-coding upstream 675343 10730168 ~ 10730415 (-)
G111329 triob,LOC107746974,LOC107551199,LOC107684227,LOC107601652,LOC107751902 non-coding upstream 736739 10791564 ~ 10793616 (-)
LOC122361039 NA non-coding upstream 869290 10924115 ~ 10924764 (-)
G111393 NA non-coding upstream 1105014 11159839 ~ 11160056 (-)
G111420 NA non-coding upstream 1170361 11225186 ~ 11225409 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other downstream 111958 9877211 ~ 9902981 (-)
G110974 NA other downstream 742334 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 862756 9145930 ~ 9152183 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 1378717 8633350 ~ 8636222 (-)
G110556 NA other downstream 1698254 8312265 ~ 8316685 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 690751 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 802695 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 1214795 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 1278350 11333175 ~ 11386993 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other upstream 1355853 11410678 ~ 11411777 (-)

Expression


Co-expression Network