tp53inp1 (tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322)


Basic Information

Item Value
gene id tp53inp1
gene name tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21322911 ~ 21329991 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260869.1
ATTTTCCACAACAATAACAAAGGGAGCAGTTGAGACCTCGGAGAAGAAACGAAAGAACAGACTAGCAAAACTCCGAACTAAAGGGTCCAGAAACTTTTAATTTCTTCCGGGaagaattgtatttatatatttttatacatcgCACGGCGAATAATCTACCTCAAGCCACTTGAAGTGATCTGTTTTTGTTCTTGAAGTCAACCCTCTTCCTGTTTACATTACTTTTGCCGCAGGGCTTGTTTTTGCACAATCAACAAGAGCTATGGCTGATCTTCATCAGGTGTTCCTCGGCTGAGAAGGAGTAACTAATGCACTTCAGCACCTTTACCAAGATCTCAGTGAGCGGCTCCCGCAGCTGATGACCAAAGAGCCCGGCCCTCGCCCACTCCCAGCAGGACCATCCAACCTCGCACCTCTGCCCCGGACAGCACCATGTTCCAGAGGTTCACCAGCATCTTGTTTGGAGACTCCCTGGAGGAGGGCAGTGGATGTCCTGTGGATCCAGACTTCAATGAGAAGGAGGAGGACGATGAGTGGATTCTGGTCGATTATCTAGCGAAGGCCTGCTCCAGTGCGTGTGGAGATGATCTGGTGGAGGGGTGCTCTGACGATGTCGCTCCTCTGGACTCTCCCGTGCGCtgctcctcctgctcctctctGGATTCAGCGACAGACACTGACGCAGAAGACGGCAACTTCTTGCGTCTCGAGGCGACATGTGGGCTTGAAGAGAGCTGGTTCATTACCCCTCCGCCTTGTTTCATGGCTGGAGGCAGAGCCCCGGTCCTGCTGGAGACCAGTCCTCTGGAGAACCTTCTGATCGAGCATCCCAGCATGTCCGTGTACGCTGTTCACAGCCCCCGTCAACGACCTGCCAAGGAAGGCACCCGTGAGCCATCGATTTTAAGATCTGATGTTCAGCGCCGGCCCAGTCATCCTTCTGCCTGCTACGCAGCCGCTCTGGTAGCTGCTCACGCCGGGTTTCTGGAGCAGACCAAGAACGTCCGCTTGGCCCAGCGCATCCGTGAAAACGTGGAGCGCCAGCAGCTGTCCCGCAACGCTCTCCGCCGCCTCAACCTGCTGCGCGATGGCGGAGCCAGACAGGCCAAACCCACCGGAGGCTACGTTCACCAGCCGGGCCAGAGGCAGTACAACTACTGAGACGGTCCCCACTGCACTCCCCCGTCCTCCCCTGCACACCACCCCTTCCACACTGGGAGAATTGGTCTTTCGCCAGAAGGAACGGAATCCTTCAGAATCAATGCCATAGGTCACTTTACTTCACGGCAGGTTCCACTCGACCTGAATGTGTCTGCATCGTGTTTCCTTTATAAGCTCCATCTGGTTCTGTCTTATGTTATATGTCATGAAGGTTGAATAACCAAGTGTTTTGTTATAGTGAGCACGATGTTGTAGTGCTCTGTTGGAGCATGTGTAGGCAGCTTGGCACTTTCAATGCCTTTAACTTGttgtctttgcttttttttttttttttttttaagccatacTAAGTTCAATCACACCAGTGATTAAATATTCAGCAGCACTTTTCTGGTTAGGAAGGAACCTGCCTGTGATTCTGTAGATCAGtgctttcttccttttttttttgtctcttttaaaatatactggGTTTATTATCACTAAAAGCCTTGTTTCCATAGTAGATTTCAaagtatgtaaaatatatttaaaaaaaaaaaaacctccaaaatattttcaaaagaaaaaaatattgaatatattacatatcaGTATGAAGTTGATAAGAGTGTATGTTATCTGCGTAGATAGATATGTATGTAAGCagtttttcctatttttagtGACTGATTTGATGTATGACTGTGTAGTGCTAATTTTCCAAcaggtgaaaaacaaacaaaaaaagacatcaaGTGTTGTAATGttaattttcatgtttgctCTATATCTGCAGTACATGTCTCAGGGTCATCACTGTTCACCTTTTGCTCTTTGCTAAAAATGCAGATTACTTGCAGACGGTAAATTTGTCTCTGTACATACTGGAGAACCTCTAACGTGCGTATGTTACCTTGTGGAAATATTTGTAATTGATGTAAATCTTTAACATAACGTGCGTCTCACACTTTGAATGAAAGCTTGCTCCTCCGAGGactgtgaaaacaaactctTTCTCTTAACTGACTGTTAAAGCCTTTGACGgagttaaagtttttttttttgactagtTACACATTATATTTGCTGAGCGAAATATTTAAGTAGCAACAGACTTAAAATTCTTTGTAGGTTATGTTTGTTACTCTTTATTCCTTTATCACTCATGACCTGGTGTTGTAAATTTCCGATGACACTGCCAAGGTAAATGTCTCCCCTAAACGAATGGAACTGAATTCAGTAACTCTGACATTCAGTCGAATGCATTTCACATGCATTAGCAACTCAAGGAAAACACCTACAGCTTTTCTTCTTTCGCTTGCTGCAGTCTGTGTTGAGCAGTATATTGcattttctgacatttttctctGTGGACGAAGGGAATGGAAGGGACATAAGGTGCTCTTCATATTCCTTGAGTAATACTGGGGAGGCCCTCTTTCTCTATGTCAGTAGATGCCTGATATTTGGTATTCATAACAGGGATTTCATTTTGCCTTGAATTGCATTTGGGGATCATGTGCCTTCCAGGTGAACAGTATGACAATGCATCCGTGAAGAACTTGAAATTTGTCCAAAGGGacacaaacaaatgtaattttactatGCACAGAGGATTACCTTGTCTCTGTGAGCCACTTGCTCTGTCAACTTTTACACGAAATgtagcaaatgttttttttttcctgtgtttaATGTGTGAAGAAAATTCTCTGTGGCATTGCTAAGTTTTAGACTATGCTTcggttgatttattttttattttagtttactgGAATAATACAGCACTTTGCCAAAAGTGTAGGGTTTTAGCATTACTtagcattgtttatttatctttttcttgAACTGATGTGTTTTGGATACATGTCATACACAGACTGTTTTATATGAGTAGTataatttgcaaataaattgtTCGTTTCATATGTCTCAAAACCAACTATTTGTCATTATGTATACTCCCTtctcaataaatgttttaatacgAAA

Function

symbol description
tp53inp1 Predicted to be involved in autophagosome assembly and positive regulation of transcription, DNA-templated. Predicted to act upstream of or within negative regulation of cell population proliferation; regulation of autophagy; and regulation of transcription, DNA-templated. Predicted to be located in PML body and cytosol. Predicted to be active in autophagosome and nucleus. Is expressed in nervous system and neural tube. Orthologous to human TP53INP1 (tumor protein p53 inducible nuclear protein 1).

NR:

description
PREDICTED: tumor protein p53-inducible nuclear protein 1

GO: NA

KEGG:

id description
K15310 TP53INP1; tumor protein p53-inducible nuclear protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260869.1 True 3135 mRNA 0.43 4 21322911 21329991

Neighbor

gene id symbol gene type direction distance location
ccne2 ccne2,LOC107717358,LOC107666792,LOC107600548 coding downstream 1824 21315779 ~ 21321087 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding downstream 153507 21167981 ~ 21169404 (-)
dek dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821 coding downstream 176834 21139170 ~ 21146077 (-)
LOC122360614 scap,LOC107600505,LOC107717374,LOC107591983,LOC107668298,LOC107713836,LOC107666822 coding downstream 184430 21120769 ~ 21138481 (-)
LOC122360714 NA coding downstream 217694 21102727 ~ 21105217 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding upstream 3659 21333650 ~ 21346600 (-)
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding upstream 30802 21360793 ~ 21365201 (-)
cfap418 LOC107666820,LOC107668311,LOC107592823,LOC107600550,LOC107591919 coding upstream 75272 21405263 ~ 21408968 (-)
trnas-aga_117 NA coding upstream 78953 21408944 ~ 21409025 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding upstream 82877 21412868 ~ 21431807 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 8165 21283464 ~ 21314746 (-)
G114997 NA non-coding downstream 202327 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 487676 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 553824 20768744 ~ 20769087 (-)
G114924 NA non-coding downstream 597240 20724171 ~ 20725671 (-)
G115051 NA non-coding upstream 1021 21331012 ~ 21331358 (-)
G115098 NA non-coding upstream 58824 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 495207 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 543835 21873826 ~ 21874051 (-)
G115262 NA non-coding upstream 900249 22230240 ~ 22237066 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 305806 21012607 ~ 21017105 (-)
G114901 NA other downstream 669337 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 671974 20636125 ~ 20650937 (-)
G114793 NA other downstream 870461 20441965 ~ 20452450 (-)
G114715 NA other downstream 1145153 20166795 ~ 20177758 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 45899 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 79968 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 79969 21409960 ~ 21410031 (-)
G115116 NA other upstream 230230 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 275967 21605958 ~ 21614203 (-)

Expression


Co-expression Network