sim1a (sim1a,sim1,LOC107697271,LOC107661021,LOC107551726)


Basic Information

Item Value
gene id sim1a
gene name sim1a,sim1,LOC107697271,LOC107661021,LOC107551726
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 2899313 ~ 2915431 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260894.1
tttttttttttttcttaaatatacatgcatgtttttgtatttatatatacacacatatattaagtaaacaaaaacttttattttgaatgcgattaagcACGGTTAACGGTTTGGAAACATGAGTTCAAACTAAATCAAAGTTTCCCACTTGGCTTTGGATGTTAATTTGATGGACAATCctttaattattcttttgagTTCTCGGAAAAACTACACAGAATGAGTGccatttttttctccctttctttctttttcggGTTCAGCTAAACATGATTAGAAGATCCGGGCCAAACAATCTATTTACCCACAAATTTCACGTCTAACAAACGAAAGGTCAGATGATTGTAATTGATTCAAGAGTCTGCCTTATTAATCTTTTTATacttattcgtttttttttttttaattcacctGAAACATTCAGCATCGCCTTTTAGGCCAAGTGTTAAATTTGTCGAAAGGATCGTTTTTGCTTTTGCTCCCGTgtgaaaaatctattttgttGATCGTGTAAAATAAAGAAGGCTTGCAGCTCGGTTATTTCCATTCTTTCCTAAGTGTCCGCCTTTACACAGCAGAGGCGTTTGCTGAGCTCATGTGTTTTGTGATTGGTCACAGAGGTCAAACTGTCGGCGCATGCTTGGTGTTATTTACCTTTAAAGTCACCCATCCGGGTAAAAAACCACTATTGTCTGTTGCTGTGAGCATTTCTGCTGCGATCAGAAACATGTTCAGTAATAcgtgcatttaatgcatttcgtTCCGTTAGTATTAGCTGAGGTATGACTGAAGCAAACGATCGTTTGCAAAAGCACCGGTGACGTCCTGGAAGTAAAGAGCGGCatctccacaaaaaaaaaattatttagccGTTTGTAACGCTGCAATTACGGACcctaattgtttaattgttttaaagccTATCGTTTATTGGCAGTGGTTTTAATGCCGGTGCTTTTTGAGTCCCTACCGAGGACTTCATATATTGTAAAGTATTTTCGATTGTTCTCTTTTCCACCGACGCCGTTTAATCAGCAGCAAATTTAGGCTTTAGGAAAAGGTTAAAGCAGCATCAAGCGTTTCGTGTGCGGGGCGCATCCTCTCTGATTTTCTCCTGCTGCAGGTGATTTCCTATTACAGACACAGACTGCTGCCCTCCTGAGATGCACGCACACAAAAAAGAGCTTTCGGCattctccatttttttttttttttttgcatcaacgATAGTTTTCCCCCCCGCTTCGAATGATCATTTATACAACGTGCATACATTTCTTATCATGCTAGCGATGAATCTTTCATCACGTGAAGCTAAAACAGTGGTGGTATCTGTATGAAATAAGAATGCCTCGTTGCTTTTTATTCAATGGGATTTATTCCCGTaactatttatttctgtgtccCTCTAAATACTGTCCTTTTGGTGAAACCCTAAGAAATTAGGACCGTAATGACTGCCTTCAATTATAAACGgcgttttatttaatatgcctTCGAGCACGTGtgtgttatttgtatttatgaggaggtatttgcatgtttaaatatgAACTGTTGGATATTGTAGGTGATTAATGCttgttttgatgaaaaaaaaattgcttttagatgttttcttgcgcatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagtgaactttaaatgcaaatattattcataGTGCGTTACGGGTCAGGGGTCAGCATTTCTAACAAATCGTGATTTCACATGGAGCGGCCGCTGGTGAATGGGATCCAATGGGAAAATCCTGTCTGGTCCTTCGGTGTCCAATGAGCTGAGCTCAGGGGGAGGGTCCGTGCGTCgctcagacagaaagagacttCAACAAACTCTCCTCCAAACAAGATCCTTCTGGATACAAAGATGCCATGTTTCCCGCGTCTGCTGCGGAATTCGGCGTGAACTGACGGCTCTGGACGTCCGTCGTTGTGGAGTTATGAACTTGTGAAGATCACGCGACTCTGCGGCGTGGCGCGCGATACGAGGAATATTACGCGCATCTGATGGACCTCAGGAAGAGATTCTGGGCCCGAGTGGATTTCACGTGCGTAAGATAAGACTCGCGGCGGATGAGCCAGACTGATCGTGATCATGAAGCTCTGTTCGTCTCGCGTCCGCTCGTAAGACACCCCCGTGAACTGCTGGGAAGAGGCGATGGCAGGAACGCGCCCGGGACGTCTCTGAAACCTTCCCATGTTGGTGAAACTGCCGGAGACCTCGCGCGTGCGGTTGACTTTTGCGTCGTGGAGAGATTGAAGCGAACGGCGGAAGGGTCCGAGACACCTGTCAGTGACGGAAGAGCATGAAGGAGAAGTCGAAGAACGCGGCGCGGACGCGGAGGGAGAAGGAGAACAGCGAGTTCTACGAGCTGGCCAAACTGCTGCCTCTGCCCTCGGCCATCACCTCGCAGCTGGACAAAGCGTCCATCATCAGGCTCACCACCAGCTACCTGAAGATGAGGATAGTCTTCCCGGAAGGTCTTGGGGAATCTTGGGGCCACGTGAGTCGAGCGAGTTCTCTGGATAATGTGGGCCGAGAGTTAGGATCACATCTGCTTCAGactttggATGGCTTCATTTTTGTGGTAGCTCCTGACGGAAAAATCATGTACATTTCTGAAACGGCATCAGTGCATTTAGGGTTGTCACAGGTAGAGCTGACGGGGAACAGCATTTATGAATACATCCACCCCGCAGACCACGACGAGATGACCGCGGTCCTGACGGCCCACCAGCCGTATCACTCACACTTCGTCCACGAATATGAAATGGAAAGATCTTTTTTCCTGAGAATGAAATGCGTCCTTGCTAAAAGAAACGCTGGCTTGACGTGTGGCGGTTACAAGGTAATTCACTGCAGCGGCTATCTGAAGATCCGTCAGTACAGCTTAGACATGTCTCCGTTTGACGGCTGTTATCAGAACGTGGGTCTGGTGGCTGTCGGTCACTCTCTCCCCCCCAGCGCAGTGACCGAGATCAAGCTCCACAGCAATATGTTCATGTTCAGAGCCAGCCTGGACATGAAACTCATTTTCCTGGACTCCAGGGTTGCGGAGCTCACTGGCTACGAGCCGCAAGACTTAATAGAGAAGACACTTTATCATCACGTCCACAGCTGTGACACTTTCCATCTCCGCTGCGCGCACCACTTGTGTGAGTTAgtGCTGGTAAAAGGACAAGTCACCACCAAATACTACCGATTCCTGGCTAAGCAGGGTGGATGGGTCTGGGTACAGAGTTATGCTACTATCGTACACAACAGCAGATCATCTAGACCGCACTGCATCGTCAGCGTCAACTACGTCCTCACGGACACGGAATACAAAGGACTACAGTTGTCCCTAGATCAAGTGACGTCCACTAAGCCCTCGTTCACCTACAACAGCCCTTCTAACCCCATCAACGAGAACAGAAGAGTTGGCAAAAGCAGAGTCACCCGTACCAAGACCAAAACAAGACTATCTCCCTATTCACAGTACCCGGGTTTTCCTACGGATCGCTCAGAGTCGGATCAGGATAGCCCATGGGGAGGGAGCCCACTGACTGACTCTGCGTCTCCTCAGCTTCTGGAGCAGTGTGAAGGCATAGAGTCCTCATGCGTGTACCGGCAGTTCTCGGAACCACGGCCGCTCTGCTATGGCCTACAGCTGACAGATGATCACCATACCTCCAGCGACCTCTACGGCCACACTCACACCGAGTCCTGCGAGAGAGGTCGCTGTAAGGCTGGCCGATACTTCCTGGGCACCCCTCAGCCCGGGCGAGAGGCGTGGTGGGGTGCAGCCCGCTCTGTCCTTCCGCTACCCAAGTCCTCTTCCGAGAATGGAGACAGTTTTGAAAGTGTAATGCCCCACATCACCTCCATCCATAGCCTGCAAGcAAGGGGTCACTGGGATGAGGACAGCATGGTCAGCTCACCTGACACGAGTGATTCAGGTGACCGATACCGTGGCGACCAATGCCGCGCAAGTCCTCAAGAACCCAGCAAGATTGAGACGTTGATTCGAGCCACACAACAGATGATCAAAGAGGAGGAAAGTCGTCTGCAGTTGAGAAAGGCTCCGACAGAAATACCTTTGGAGTCTACAAATGGTCTGGCCAAGAGCCACGGCTCGTCGTTTCACAGTACCGACTTTCCTCAGCCAGCATTGCAGAGCGTGGTGTGTAGGGGGCCGGCTCAGGTTATAAGCCCCGCCCCTAGCCCTGTTCCTCTCTCCCGTCTCAGCAGCCCCATCCCTGACAGACTGGGTAAAAGTAAAGACTTCCTGCAAAGCGAGCTCTCCTCTTCTCAGCAGCACCAGCAGCCGCTGCCCCTGACGGGCACATGTGCTGTCTCTCCGACTCCAGCGCTATACCCCTCACACCCCCGCCAATACCTGGAAAAACACACAGCCTACTCACTCACCAGCTACGCACTAGAACATCTGTACGAGGCAGACAGCTTTAGAGGATACTCCCTGGGTTGCTCGGGTTCCTCCCATTACGACATGGCCACTCATCTACGCATGCAGGCTGAACAAGCACCGGGCCATAAAGGCACCTCCGTCATTATCACCAACGGCAGCTGATGCTTATCAAATCACGAACCGACACTCAGTGCTTCACCCTCTCACTCCAGCTAGCCTAGGATTTCTGATTAGAATTTTTTCGTTCCTACGAATTCTGCAAACACTTTTTAATTCTGAATTGttttctagtaaaaaaaaaaaagtaaacgtccttaaagcttttttttttaaaggtttatgcttaagcagaaaaaaagctaaacgaaattaaataaatcttatatTATGCAATTGTGTATAAGTGAATTGATCTaattttaaggatgtttagatatttttactggaaaacaagatgaaaatactaattaattacACTTTTGCAGTGTGTTAAGGGATGTGAGTTGATGTCTATGAGAGGGACATTTGTTCATCTGTTCACAGAGAAGGGATTCCATGTGAGAGTTTGTTTGTCAAATACTTTCTATACCCGGATGCTACTTTTTTTAACCACTATTATAAGCTGCTTGAATAAATTGGAATTGTTCGAATTTCTCAAAATAAGAGATTTCATGAGAACCGTGATCTCGTGACAGCACATTGACACGATGGTTCAACAATCTACAccgtaaatgtatttaaataattttattttctgtagttCACATTTGGATTTGGGTCACAATACTTTGTGGTTAACttacatgtaaattaaatacgtgggatgttttttttttcttgtttttctatATCCATGACCTCATATTCCATCCAGGTTTTAGTCACTTGCCCTGTGTACATGAGACACAGCCTGTTTTTAACCAGTCCATCTGCGGCACTGGGGAAAATACAtcttaatattaaaagaaacgTTGAGTAGCATGCTGATGTACCAGAGATGAACAACTACGTCTAATCCAAAACGCAGctttaatttataattgtttaagGTTATTGTAGGATTGAATTTTAGCTCATTTGTGTACTGGGATACTTTTTGCAGTTGCATATGCCGTCCATCTGTGTTTGGACCCGATTCAGTCAAAGGCTTGAAGATTCAATTCgagacttatttttttaaaagaagaaaacggAGTTGAGTCCCTCCGCAAGCCTCTAACGTGTCAGCCTTTAAAAGTGAAAACCGAGATTATGCAATTATGAAACACACCTGATTTTATTCAAACGAACGGAATGATAGAAATGGACTAAACGGCGACTCTTGCGCTGGTTTGATTAGAAGgtctggaaatgtttttttggccGGATGAGTGATTGACTGCTGCGGTGCTCGAAGGCTTCGAGTCGAGCTGCTGTTTGGTGTTTTGAGGTTCCACACTGGAGGAGTCCAAAGTCTGATACGGACGCTAAAAGGGGAATTTTCTGACAGACTCTACCCCGTACCTCACTCTTATCTTCATGTATTTATAAGAAACTGGCTCTGTTTGGAAAGCTGTTTTTCTCTGAGTGAAAgaaactctgaaaaaaaaaaaaatatttatgatgtaCATACTCAAAATACACCACCGCCCCTCCCCCTCACCCACACCaaataaaatgatgcaaaagttgcaaaatgtatttattatgtgaatgaaaaatgtcttttgtttcagaatatcgcagtgtgtatttatttacaatttttcagTTCTGCGTCTAAATGAAGTGCCATTGTTTCCCTTCATGCGTCTACTATTTCTAAACACGCAATGAGAAATATTTGAGTCGGTTTCGTATTGCAGCAAAACTGTTTAGAATAGCATATTTCAAAATTGGTTCTGCGTTTGCTTTAATCTTGACATTGTTCATCCGGCGAGACCTTGGAGAACTCAGGTGAAAATGATCttgaaataacaaatatatcCCTAATTTGATCattattcatgtttaatatGATATTTCATACTCGCttgagaaatgaataaatgattgcaGATATGCTCGTTCA
>XM_043260895.1
tttttttttttttcttaaatatacatgcatgtttttgtatttatatatacacacatatattaagtaaacaaaaacttttattttgaatgcgattaagcACGGTTAACGGTTTGGAAACATGAGTTCAAACTAAATCAAAGTTTCCCACTTGGCTTTGGATGTTAATTTGATGGACAATCctttaattattcttttgagTTCTCGGAAAAACTACACAGAATGAGTGccatttttttctccctttctttctttttcggGTTCAGCTAAACATGATTAGAAGATCCGGGCCAAACAATCTATTTACCCACAAATTTCACGTCTAACAAACGAAAGGTCAGATGATTGTAATTGATTCAAGAGTCTGCCTTATTAATCTTTTTATacttattcgtttttttttttttaattcacctGAAACATTCAGCATCGCCTTTTAGGCCAAGTGTTAAATTTGTCGAAAGGATCGTTTTTGCTTTTGCTCCCGTgtgaaaaatctattttgttGATCGTGTAAAATAAAGAAGGCTTGCAGCTCGGTTATTTCCATTCTTTCCTAAGTGTCCGCCTTTACACAGCAGAGGCGTTTGCTGAGCTCATGTGTTTTGTGATTGGTCACAGAGGTCAAACTGTCGGCGCATGCTTGGTGTTATTTACCTTTAAAGTCACCCATCCGGGTAAAAAACCACTATTGTCTGTTGCTGTGAGCATTTCTGCTGCGATCAGAAACATGTTCAGTAATAcgtgcatttaatgcatttcgtTCCGTTAGTATTAGCTGAGGTATGACTGAAGCAAACGATCGTTTGCAAAAGCACCGGTGACGTCCTGGAAGTAAAGAGCGGCatctccacaaaaaaaaaattatttagccGTTTGTAACGCTGCAATTACGGACcctaattgtttaattgttttaaagccTATCGTTTATTGGCAGTGGTTTTAATGCCGGTGCTTTTTGAGTCCCTACCGAGGACTTCATATATTGTAAAGTATTTTCGATTGTTCTCTTTTCCACCGACGCCGTTTAATCAGCAGCAAATTTAGGCTTTAGGAAAAGGTTAAAGCAGCATCAAGCGTTTCGTGTGCGGGGCGCATCCTCTCTGATTTTCTCCTGCTGCAGGTGATTTCCTATTACAGACACAGACTGCTGCCCTCCTGAGATGCACGCACACAAAAAAGAGCTTTCGGCattctccatttttttttttttttttgcatcaacgATAGTTTTCCCCCCCGCTTCGAATGATCATTTATACAACGTGCATACATTTCTTATCATGCTAGCGATGAATCTTTCATCACGTGAAGCTAAAACAGTGGTGGTATCTGTATGAAATAAGAATGCCTCGTTGCTTTTTATTCAATGGGATTTATTCCCGTaactatttatttctgtgtccCTCTAAATACTGTCCTTTTGGTGAAACCCTAAGAAATTAGGACCGTAATGACTGCCTTCAATTATAAACGgcgttttatttaatatgcctTCGAGCACGTGtgtgttatttgtatttatgaggaggtatttgcatgtttaaatatgAACTGTTGGATATTGTAGGTGATTAATGCttgttttgatgaaaaaaaaattgcttttagatgttttcttgcgcatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagtgaactttaaatgcaaatattattcataGTGCGTTACGGGTCAGGGGTCAGCATTTCTAACAAATCGTGATTTCACATGGAGCGGCCGCTGGTGAATGGGATCCAATGGGAAAATCCTGTCTGGTCCTTCGGTGTCCAATGAGCTGAGCTCAGGGGGAGGGTCCGTGCGTCgctcagacagaaagagacttCAACAAACTCTCCTCCAAACAAGATCCTTCTGGATACAAAGATGCCATGTTTCCCGCGTCTGCTGCGGAATTCGGCGTGAACTGACGGCTCTGGACGTCCGTCGTTGTGGAGTTATGAACTTGTGAAGATCACGCGACTCTGCGGCGTGGCGCGCGATACGAGGAATATTACGCGCATCTGATGGACCTCAGGAAGAGATTCTGGGCCCGAGTGGATTTCACGTGCGTAAGATAAGACTCGCGGCGGATGAGCCAGACTGATCGTGATCATGAAGCTCTGTTCGTCTCGCGTCCGCTCGTAAGACACCCCCGTGAACTGCTGGGAAGAGGCGATGGCAGGAACGCGCCCGGGACGTCTCTGAAACCTTCCCATGTTGGTGAAACTGCCGGAGACCTCGCGCGTGCGGTTGACTTTTGCGTCGTGGAGAGATTGAAGCGAACGGCGGAAGGGTCCGAGACACCTGTCAGTGACGGAAGAGCATGAAGGAGAAGTCGAAGAACGCGGCGCGGACGCGGAGGGAGAAGGAGAACAGCGAGTTCTACGAGCTGGCCAAACTGCTGCCTCTGCCCTCGGCCATCACCTCGCAGCTGGACAAAGCGTCCATCATCAGGCTCACCACCAGCTACCTGAAGATGAGGATAGTCTTCCCGGAAGGTCTTGGGGAATCTTGGGGCCACGTGAGTCGAGCGAGTTCTCTGGATAATGTGGGCCGAGAGTTAGGATCACATCTGCTTCAGactttggATGGCTTCATTTTTGTGGTAGCTCCTGACGGAAAAATCATGTACATTTCTGAAACGGCATCAGTGCATTTAGGGTTGTCACAGGTAGAGCTGACGGGGAACAGCATTTATGAATACATCCACCCCGCAGACCACGACGAGATGACCGCGGTCCTGACGGCCCACCAGCCGTATCACTCACACTTCGTCCACGAATATGAAATGGAAAGATCTTTTTTCCTGAGAATGAAATGCGTCCTTGCTAAAAGAAACGCTGGCTTGACGTGTGGCGGTTACAAGGTAATTCACTGCAGCGGCTATCTGAAGATCCGTCAGTACAGCTTAGACATGTCTCCGTTTGACGGCTGTTATCAGAACGTGGGTCTGGTGGCTGTCGGTCACTCTCTCCCCCCCAGCGCAGTGACCGAGATCAAGCTCCACAGCAATATGTTCATGTTCAGAGCCAGCCTGGACATGAAACTCATTTTCCTGGACTCCAGGGTTGCGGAGCTCACTGGCTACGAGCCGCAAGACTTAATAGAGAAGACACTTTATCATCACGTCCACAGCTGTGACACTTTCCATCTCCGCTGCGCGCACCACTTGTtGCTGGTAAAAGGACAAGTCACCACCAAATACTACCGATTCCTGGCTAAGCAGGGTGGATGGGTCTGGGTACAGAGTTATGCTACTATCGTACACAACAGCAGATCATCTAGACCGCACTGCATCGTCAGCGTCAACTACGTCCTCACGGACACGGAATACAAAGGACTACAGTTGTCCCTAGATCAAGTGACGTCCACTAAGCCCTCGTTCACCTACAACAGCCCTTCTAACCCCATCAACGAGAACAGAAGAGTTGGCAAAAGCAGAGTCACCCGTACCAAGACCAAAACAAGACTATCTCCCTATTCACAGTACCCGGGTTTTCCTACGGATCGCTCAGAGTCGGATCAGGATAGCCCATGGGGAGGGAGCCCACTGACTGACTCTGCGTCTCCTCAGCTTCTGGAGCAGTGTGAAGGCATAGAGTCCTCATGCGTGTACCGGCAGTTCTCGGAACCACGGCCGCTCTGCTATGGCCTACAGCTGACAGATGATCACCATACCTCCAGCGACCTCTACGGCCACACTCACACCGAGTCCTGCGAGAGAGGTCGCTGTAAGGCTGGCCGATACTTCCTGGGCACCCCTCAGCCCGGGCGAGAGGCGTGGTGGGGTGCAGCCCGCTCTGTCCTTCCGCTACCCAAGTCCTCTTCCGAGAATGGAGACAGTTTTGAAAGTGTAATGCCCCACATCACCTCCATCCATAGCCTGCAAGcAAGGGGTCACTGGGATGAGGACAGCATGGTCAGCTCACCTGACACGAGTGATTCAGGTGACCGATACCGTGGCGACCAATGCCGCGCAAGTCCTCAAGAACCCAGCAAGATTGAGACGTTGATTCGAGCCACACAACAGATGATCAAAGAGGAGGAAAGTCGTCTGCAGTTGAGAAAGGCTCCGACAGAAATACCTTTGGAGTCTACAAATGGTCTGGCCAAGAGCCACGGCTCGTCGTTTCACAGTACCGACTTTCCTCAGCCAGCATTGCAGAGCGTGGTGTGTAGGGGGCCGGCTCAGGTTATAAGCCCCGCCCCTAGCCCTGTTCCTCTCTCCCGTCTCAGCAGCCCCATCCCTGACAGACTGGGTAAAAGTAAAGACTTCCTGCAAAGCGAGCTCTCCTCTTCTCAGCAGCACCAGCAGCCGCTGCCCCTGACGGGCACATGTGCTGTCTCTCCGACTCCAGCGCTATACCCCTCACACCCCCGCCAATACCTGGAAAAACACACAGCCTACTCACTCACCAGCTACGCACTAGAACATCTGTACGAGGCAGACAGCTTTAGAGGATACTCCCTGGGTTGCTCGGGTTCCTCCCATTACGACATGGCCACTCATCTACGCATGCAGGCTGAACAAGCACCGGGCCATAAAGGCACCTCCGTCATTATCACCAACGGCAGCTGATGCTTATCAAATCACGAACCGACACTCAGTGCTTCACCCTCTCACTCCAGCTAGCCTAGGATTTCTGATTAGAATTTTTTCGTTCCTACGAATTCTGCAAACACTTTTTAATTCTGAATTGttttctagtaaaaaaaaaaaagtaaacgtccttaaagcttttttttttaaaggtttatgcttaagcagaaaaaaagctaaacgaaattaaataaatcttatatTATGCAATTGTGTATAAGTGAATTGATCTaattttaaggatgtttagatatttttactggaaaacaagatgaaaatactaattaattacACTTTTGCAGTGTGTTAAGGGATGTGAGTTGATGTCTATGAGAGGGACATTTGTTCATCTGTTCACAGAGAAGGGATTCCATGTGAGAGTTTGTTTGTCAAATACTTTCTATACCCGGATGCTACTTTTTTTAACCACTATTATAAGCTGCTTGAATAAATTGGAATTGTTCGAATTTCTCAAAATAAGAGATTTCATGAGAACCGTGATCTCGTGACAGCACATTGACACGATGGTTCAACAATCTACAccgtaaatgtatttaaataattttattttctgtagttCACATTTGGATTTGGGTCACAATACTTTGTGGTTAACttacatgtaaattaaatacgtgggatgttttttttttcttgtttttctatATCCATGACCTCATATTCCATCCAGGTTTTAGTCACTTGCCCTGTGTACATGAGACACAGCCTGTTTTTAACCAGTCCATCTGCGGCACTGGGGAAAATACAtcttaatattaaaagaaacgTTGAGTAGCATGCTGATGTACCAGAGATGAACAACTACGTCTAATCCAAAACGCAGctttaatttataattgtttaagGTTATTGTAGGATTGAATTTTAGCTCATTTGTGTACTGGGATACTTTTTGCAGTTGCATATGCCGTCCATCTGTGTTTGGACCCGATTCAGTCAAAGGCTTGAAGATTCAATTCgagacttatttttttaaaagaagaaaacggAGTTGAGTCCCTCCGCAAGCCTCTAACGTGTCAGCCTTTAAAAGTGAAAACCGAGATTATGCAATTATGAAACACACCTGATTTTATTCAAACGAACGGAATGATAGAAATGGACTAAACGGCGACTCTTGCGCTGGTTTGATTAGAAGgtctggaaatgtttttttggccGGATGAGTGATTGACTGCTGCGGTGCTCGAAGGCTTCGAGTCGAGCTGCTGTTTGGTGTTTTGAGGTTCCACACTGGAGGAGTCCAAAGTCTGATACGGACGCTAAAAGGGGAATTTTCTGACAGACTCTACCCCGTACCTCACTCTTATCTTCATGTATTTATAAGAAACTGGCTCTGTTTGGAAAGCTGTTTTTCTCTGAGTGAAAgaaactctgaaaaaaaaaaaaatatttatgatgtaCATACTCAAAATACACCACCGCCCCTCCCCCTCACCCACACCaaataaaatgatgcaaaagttgcaaaatgtatttattatgtgaatgaaaaatgtcttttgtttcagaatatcgcagtgtgtatttatttacaatttttcagTTCTGCGTCTAAATGAAGTGCCATTGTTTCCCTTCATGCGTCTACTATTTCTAAACACGCAATGAGAAATATTTGAGTCGGTTTCGTATTGCAGCAAAACTGTTTAGAATAGCATATTTCAAAATTGGTTCTGCGTTTGCTTTAATCTTGACATTGTTCATCCGGCGAGACCTTGGAGAACTCAGGTGAAAATGATCttgaaataacaaatatatcCCTAATTTGATCattattcatgtttaatatGATATTTCATACTCGCttgagaaatgaataaatgattgcaGATATGCTCGTTCA
>XM_043260896.1
GGCTTCATTTTTGTGGTAGCTCCTGACGGAAAAATCATGTACATTTCTGAAACGGCATCAGTGCATTTAGGGTTGTCACAGAGCTGACGGGGAACAGCATTTATGAATACATCCACCCCGCAGACCACGACGAGATGACCGCGGTCCTGACGGCCCACCAGCCGTATCACTCACACTTCGTCCACGAATATGAAATGGAAAGATCTTTTTTCCTGAGAATGAAATGCGTCCTTGCTAAAAGAAACGCTGGCTTGACGTGTGGCGGTTACAAGGTAATTCACTGCAGCGGCTATCTGAAGATCCGTCAGTACAGCTTAGACATGTCTCCGTTTGACGGCTGTTATCAGAACGTGGGTCTGGTGGCTGTCGGTCACTCTCTCCCCCCCAGCGCAGTGACCGAGATCAAGCTCCACAGCAATATGTTCATGTTCAGAGCCAGCCTGGACATGAAACTCATTTTCCTGGACTCCAGGGTTGCGGAGCTCACTGGCTACGAGCCGCAAGACTTAATAGAGAAGACACTTTATCATCACGTCCACAGCTGTGACACTTTCCATCTCCGCTGCGCGCACCACTTGTGTGAGTTAgtGCTGGTAAAAGGACAAGTCACCACCAAATACTACCGATTCCTGGCTAAGCAGGGTGGATGGGTCTGGGTACAGAGTTATGCTACTATCGTACACAACAGCAGATCATCTAGACCGCACTGCATCGTCAGCGTCAACTACGTCCTCACGGACACGGAATACAAAGGACTACAGTTGTCCCTAGATCAAGTGACGTCCACTAAGCCCTCGTTCACCTACAACAGCCCTTCTAACCCCATCAACGAGAACAGAAGAGTTGGCAAAAGCAGAGTCACCCGTACCAAGACCAAAACAAGACTATCTCCCTATTCACAGTACCCGGGTTTTCCTACGGATCGCTCAGAGTCGGATCAGGATAGCCCATGGGGAGGGAGCCCACTGACTGACTCTGCGTCTCCTCAGCTTCTGGAGCAGTGTGAAGGCATAGAGTCCTCATGCGTGTACCGGCAGTTCTCGGAACCACGGCCGCTCTGCTATGGCCTACAGCTGACAGATGATCACCATACCTCCAGCGACCTCTACGGCCACACTCACACCGAGTCCTGCGAGAGAGGTCGCTGTAAGGCTGGCCGATACTTCCTGGGCACCCCTCAGCCCGGGCGAGAGGCGTGGTGGGGTGCAGCCCGCTCTGTCCTTCCGCTACCCAAGTCCTCTTCCGAGAATGGAGACAGTTTTGAAAGTGTAATGCCCCACATCACCTCCATCCATAGCCTGCAAGcAAGGGGTCACTGGGATGAGGACAGCATGGTCAGCTCACCTGACACGAGTGATTCAGGTGACCGATACCGTGGCGACCAATGCCGCGCAAGTCCTCAAGAACCCAGCAAGATTGAGACGTTGATTCGAGCCACACAACAGATGATCAAAGAGGAGGAAAGTCGTCTGCAGTTGAGAAAGGCTCCGACAGAAATACCTTTGGAGTCTACAAATGGTCTGGCCAAGAGCCACGGCTCGTCGTTTCACAGTACCGACTTTCCTCAGCCAGCATTGCAGAGCGTGGTGTGTAGGGGGCCGGCTCAGGTTATAAGCCCCGCCCCTAGCCCTGTTCCTCTCTCCCGTCTCAGCAGCCCCATCCCTGACAGACTGGGTAAAAGTAAAGACTTCCTGCAAAGCGAGCTCTCCTCTTCTCAGCAGCACCAGCAGCCGCTGCCCCTGACGGGCACATGTGCTGTCTCTCCGACTCCAGCGCTATACCCCTCACACCCCCGCCAATACCTGGAAAAACACACAGCCTACTCACTCACCAGCTACGCACTAGAACATCTGTACGAGGCAGACAGCTTTAGAGGATACTCCCTGGGTTGCTCGGGTTCCTCCCATTACGACATGGCCACTCATCTACGCATGCAGGCTGAACAAGCACCGGGCCATAAAGGCACCTCCGTCATTATCACCAACGGCAGCTGATGCTTATCAAATCACGAACCGACACTCAGTGCTTCACCCTCTCACTCCAGCTAGCCTAGGATTTCTGATTAGAATTTTTTCGTTCCTACGAATTCTGCAAACACTTTTTAATTCTGAATTGttttctagtaaaaaaaaaaaagtaaacgtccttaaagcttttttttttaaaggtttatgcttaagcagaaaaaaagctaaacgaaattaaataaatcttatatTATGCAATTGTGTATAAGTGAATTGATCTaattttaaggatgtttagatatttttactggaaaacaagatgaaaatactaattaattacACTTTTGCAGTGTGTTAAGGGATGTGAGTTGATGTCTATGAGAGGGACATTTGTTCATCTGTTCACAGAGAAGGGATTCCATGTGAGAGTTTGTTTGTCAAATACTTTCTATACCCGGATGCTACTTTTTTTAACCACTATTATAAGCTGCTTGAATAAATTGGAATTGTTCGAATTTCTCAAAATAAGAGATTTCATGAGAACCGTGATCTCGTGACAGCACATTGACACGATGGTTCAACAATCTACAccgtaaatgtatttaaataattttattttctgtagttCACATTTGGATTTGGGTCACAATACTTTGTGGTTAACttacatgtaaattaaatacgtgggatgttttttttttcttgtttttctatATCCATGACCTCATATTCCATCCAGGTTTTAGTCACTTGCCCTGTGTACATGAGACACAGCCTGTTTTTAACCAGTCCATCTGCGGCACTGGGGAAAATACAtcttaatattaaaagaaacgTTGAGTAGCATGCTGATGTACCAGAGATGAACAACTACGTCTAATCCAAAACGCAGctttaatttataattgtttaagGTTATTGTAGGATTGAATTTTAGCTCATTTGTGTACTGGGATACTTTTTGCAGTTGCATATGCCGTCCATCTGTGTTTGGACCCGATTCAGTCAAAGGCTTGAAGATTCAATTCgagacttatttttttaaaagaagaaaacggAGTTGAGTCCCTCCGCAAGCCTCTAACGTGTCAGCCTTTAAAAGTGAAAACCGAGATTATGCAATTATGAAACACACCTGATTTTATTCAAACGAACGGAATGATAGAAATGGACTAAACGGCGACTCTTGCGCTGGTTTGATTAGAAGgtctggaaatgtttttttggccGGATGAGTGATTGACTGCTGCGGTGCTCGAAGGCTTCGAGTCGAGCTGCTGTTTGGTGTTTTGAGGTTCCACACTGGAGGAGTCCAAAGTCTGATACGGACGCTAAAAGGGGAATTTTCTGACAGACTCTACCCCGTACCTCACTCTTATCTTCATGTATTTATAAGAAACTGGCTCTGTTTGGAAAGCTGTTTTTCTCTGAGTGAAAgaaactctgaaaaaaaaaaaaatatttatgatgtaCATACTCAAAATACACCACCGCCCCTCCCCCTCACCCACACCaaataaaatgatgcaaaagttgcaaaatgtatttattatgtgaatgaaaaatgtcttttgtttcagaatatcgcagtgtgtatttatttacaatttttcagTTCTGCGTCTAAATGAAGTGCCATTGTTTCCCTTCATGCGTCTACTATTTCTAAACACGCAATGAGAAATATTTGAGTCGGTTTCGTATTGCAGCAAAACTGTTTAGAATAGCATATTTCAAAATTGGTTCTGCGTTTGCTTTAATCTTGACATTGTTCATCCGGCGAGACCTTGGAGAACTCAGGTGAAAATGATCttgaaataacaaatatatcCCTAATTTGATCattattcatgtttaatatGATATTTCATACTCGCttgagaaatgaataaatgattgcaGATATGCTCGTTCA

Function

symbol description
sim1a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Acts upstream of or within nervous system development and proximal tubule development. Predicted to be located in nucleus. Is expressed in several structures, including basal plate midbrain region; central nervous system; corpuscles of Stannius; intermediate mesoderm; and pronephros. Human ortholog(s) of this gene implicated in obesity. Orthologous to human SIM1 (SIM bHLH transcription factor 1).
sim1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and protein heterodimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated and ureteric bud development. Predicted to be located in nucleus. Predicted to be part of chromatin. Implicated in obesity.

NR:

description
single-minded homolog 1-A-like isoform X2

GO:

id name namespace
GO:0071542 dopaminergic neuron differentiation biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0021979 hypothalamus cell differentiation biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K09100 SIM; single-minded

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260894.1 True 6537 mRNA 0.44 12 2899313 2915431
XM_043260895.1 False 6528 mRNA 0.44 12 2899313 2915431
XM_043260896.1 False 3882 mRNA 0.45 9 2899313 2908777

Neighbor

gene id symbol gene type direction distance location
LOC122360106 NA coding downstream 198364 2700321 ~ 2700949 (-)
LOC122360634 prdm1,prdm1a,LOC107661008,LOC107551748,LOC107697283,LOC107581686 coding downstream 888647 2000781 ~ 2010666 (-)
med18 med18,LOC107714426,LOC107661027,LOC107697268,LOC107720175 coding downstream 1179198 1718035 ~ 1720115 (-)
foxo6a LOC107714419,LOC107551733,LOC107661026,LOC107720174,LOC107697267,LOC107581751 coding downstream 1194592 1684904 ~ 1704721 (-)
nt5c3a LOC107714420,LOC107661006,LOC107551731,LOC107697280,LOC107720166,LOC107581689 coding downstream 1236686 1656548 ~ 1662627 (-)
ascc3 ascc3 coding upstream 224 2915655 ~ 3064578 (-)
hace1 hace1,LOC107679309,LOC107661011,LOC107598938 coding upstream 768687 3684118 ~ 3699070 (-)
csf3r NA coding upstream 813711 3729142 ~ 3743612 (-)
LOC122360352 zgc:91890,LOC107559041,LOC107689180,LOC107688990,LOC107713919,LOC107726234 coding upstream 1244056 4159487 ~ 4160521 (-)
LOC122360353 LOC107713904,LOC107689171,LOC107559021,LOC107688989 coding upstream 1288250 4203681 ~ 4243342 (-)
G109544 NA non-coding downstream 57032 2842052 ~ 2842281 (-)
G109538 NA non-coding downstream 70690 2825428 ~ 2828623 (-)
G109531 NA non-coding downstream 90559 2808376 ~ 2808754 (-)
G109522 NA non-coding downstream 218975 2677203 ~ 2680338 (-)
G109509 NA non-coding downstream 369314 2528804 ~ 2529999 (-)
G109607 LOC107667969,LOC107661009,LOC107714403 non-coding upstream 428499 3343930 ~ 3418605 (-)
G109614 NA non-coding upstream 709211 3624642 ~ 3625012 (-)
G109615 NA non-coding upstream 713377 3628808 ~ 3629417 (-)
G109638 NA non-coding upstream 793836 3709267 ~ 3717083 (-)
G109650 NA non-coding upstream 975707 3891138 ~ 3891823 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other downstream 935152 1741120 ~ 1964161 (-)
G109287 NA other downstream 2016561 882459 ~ 882752 (-)
G109275 NA other downstream 2266416 632465 ~ 632897 (-)
G109600 NA other upstream 198411 3113842 ~ 3129979 (-)
G109724 LOC107084717,LOC106511825 other upstream 1179326 4094757 ~ 4095504 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other upstream 2316780 5232211 ~ 5245558 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 2867236 5782667 ~ 5790534 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other upstream 2901609 5817040 ~ 5818618 (-)

Expression


Co-expression Network