si:dkey-26c10.5 (LOC107549484,LOC107724725,LOC107700203,LOC107672979)


Basic Information

Item Value
gene id si:dkey-26c10.5
gene name LOC107549484,LOC107724725,LOC107700203,LOC107672979
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13673756 ~ 13678258 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260975.1
TCATGTGTGATGCTCTGAATTATAATGATGTGAGTTAGCATCAGGTCAGCATATTTACAAGTGTCAATCTTTCCAGTtactgtgtcatttttttttttctttatgaagTTGGTTAGACgataagaaattaaaacagttttgctaCAGAGTTTGCACGCACTGGGACCTCTGACAAGTTAGTTTGGAAAACGAAACTCAAGGGAATTAGCAGgcagaaaaaaagcaatggAGAGCAAGAAAGAAGTAGAAGTGGAGTTGGAAGAGATCGCACCAGTTGAGGAAGATAAGGTGAAAGAAGATCAGAAGAATGAGGCAAAAGCAGAGGATGTAGAAGAAGGGAATATTTACACCACTCTCACCAATCCGCCTGAACATGAATATGGGGTGCCCTCCTCAACTCGCTCTTATACGGTCAATAAAGATACATCAATAGATATTCACCGGAGACTCCGCGTTTACCGCATCGTTTCGCTGATTCTTTTTGTCCTCTGCGTCCTGTTGCTGATCGTGGTGCTCGTGCTGCTTCTGAGGCTGACTGGGACGCCTCCATGTCCGGAGGTAGAGCAAACTACCAGGTCTCTACTGGAACATGAATGCACTCTGGGCAAATGCCAAGAGCTTCACCAACTGCCTCagcgTATGTGCAGTGACTGTGGCAAGGGCTGGCTGAGGTTCGAGAATACTTGTTACTTCCTGTCTCAAAACCGCCTCACCTGGCAGCAGAGCAGGGAGGAATGCCAGAGGATAGGAGGGGATCTTGCCATCATTACTAATGAACGTGTGCAGATGTATCTGAACAAGAAAGGGGATTTGCACTACTGGATTGGGCTGAATCATTTGGGGGCAAATAAATGGACATGGATTAACAACACTGTATTGACAGTGAGATATTGGGGAGATGTTTCTTCCCCTGGAGAGTGTGCCATCTTGGCTGCAAATGAACCAGCTGAACGGAGCTGGCACCCATCTTCCTGCGATTTATACCTACAGTACATCTGTCAAAAGATGTAGATGTCCTCAACCACACCCATTGACATCACATATATATCTGGATATCATATCAATCATAACAAGTCTTCAAGATTATCATCTTTTCTCTAAAGATCCTAGTCAGAAATAGTGACATTTGGTCCATCAACAcagtttttttgtacattttctgtgGATTATGGAGCATTATAGGTAGAGAAAAAGGCAGTTTTAGTAAATATcccatttatttgtattataattgaACTAATTTCTAACCAGATCGATCATGTATACAAAGCCTGTTTATTTGCACTAAATATGGTCTAATGGTCACACGATCATGTTCTGAATTGCTTTCTCTGAAATGTCTTTGTGTATTGCTTAAATAAACTTTCAcctttatatttaacaataaagagAACCACAATGCA
>XM_043260976.1
ATCATGTGTGATGCTCTGAATTATAATGATGTGAGTTAGCATCAGGTCAGCATATTTACAAGTGTCAATCTTTCCAGTtactgtgtcatttttttttttctttatgaagTTGGTTAGACgataagaaattaaaacagttttgctaCAGAGTTTGCACGCACTGGGACCTCTGACAAGTTAGTTTGGAAAACGAAACTCAAGGGAATTAGCAGgcagaaaaaaagcaatggAGAGCAAGAAAGAAGTAGAAGTGGAGTTGGAAGAGATCGCACCAGTTGAGGAAGATAAGGTGAAAGAAGATCAGAAGAATGAGGCAAAAGAGGATGTAGAAGAAGGGAATATTTACACCACTCTCACCAATCCGCCTGAACATGAATATGGGGTGCCCTCCTCAACTCGCTCTTATACGGTCAATAAAGATACATCAATAGATATTCACCGGAGACTCCGCGTTTACCGCATCGTTTCGCTGATTCTTTTTGTCCTCTGCGTCCTGTTGCTGATCGTGGTGCTCGTGCTGCTTCTGAGGCTGACTGGGACGCCTCCATGTCCGGAGGTAGAGCAAACTACCAGGTCTCTACTGGAACATGAATGCACTCTGGGCAAATGCCAAGAGCTTCACCAACTGCCTCagcgTATGTGCAGTGACTGTGGCAAGGGCTGGCTGAGGTTCGAGAATACTTGTTACTTCCTGTCTCAAAACCGCCTCACCTGGCAGCAGAGCAGGGAGGAATGCCAGAGGATAGGAGGGGATCTTGCCATCATTACTAATGAACGTGTGCAGATGTATCTGAACAAGAAAGGGGATTTGCACTACTGGATTGGGCTGAATCATTTGGGGGCAAATAAATGGACATGGATTAACAACACTGTATTGACAGTGAGATATTGGGGAGATGTTTCTTCCCCTGGAGAGTGTGCCATCTTGGCTGCAAATGAACCAGCTGAACGGAGCTGGCACCCATCTTCCTGCGATTTATACCTACAGTACATCTGTCAAAAGATGTAGATGTCCTCAACCACACCCATTGACATCACATATATATCTGGATATCATATCAATCATAACAAGTCTTCAAGATTATCATCTTTTCTCTAAAGATCCTAGTCAGAAATAGTGACATTTGGTCCATCAACAcagtttttttgtacattttctgtgGATTATGGAGCATTATAGGTAGAGAAAAAGGCAGTTTTAGTAAATATcccatttatttgtattataattgaACTAATTTCTAACCAGATCGATCATGTATACAAAGCCTGTTTATTTGCACTAAATATGGTCTAATGGTCACACGATCATGTTCTGAATTGCTTTCTCTGAAATGTCTTTGTGTATTGCTTAAATAAACTTTCAcctttatatttaacaataaagagAACCACAATGCA
>XM_043260977.1
TCTATACTATAAAAATCTGGTTACATTTAGAAAGTGTAAAAAACAGTAGAGCTGTGCTTACAAGAACCAagttattatttcataatggtGCCGCACACAAGTGGCACAATATAGAACGTAAAAATGCGAAATAACAAGATATTAGAAATttcaaacacaaataaatgtaatcgtGCAGGGACTTCAGGAatacctttttttgtgtgtgtgaaaacttTGCATTCATTTTGGGCAAAGTTCCTATTTTTAGTGTTAACCTGAAAACCTTTTGAGGGAACTCTATTCTTTCTATTATAACTTTctatttctatctttctattATAACTTTGCAACTAATTTTCACTAACtggcaactacatgtctactaactctagtagactgttagggtaggtgtagggttaataaaataaattgacatacacttgcaaagtttctgatagtcagtacgTTGTGAACCTATTAAACCAAGGCCCGCATAAATTATAGATCGCTCCGTCGTTTGAACGGACTACTTTGTATGAACATAACTCGCTGAATAAAAGGCCTGtctgggacacagctgcataaTGTGCTCTCTCGAGGCCAGCGGGTATCTTATTTTGTCCAGAGAACAGTTGAAGGTTTGAGAAGGGCACGCGAGGACACAGAGACGAGACGGAGCGTCGTGGTCAAAGCCCCCCGGCAGTGAAGTGTTAGTGCGCGCATAAAGAGCAGAGACTCGGTCGAGTGCGCACTAGATTACACACGTCTGCAGACTATTCCCTGGCCCTCGTCGAACCGAGACACGGTTCTGTATTAGCGCAAACATGTATGTAAAACTCTGCAATTTCGGCAAATACAAAGAAGGCAAGACTGAACCGAAACAGCTAGAGCCGGATTCAGATACATCAATAGATATTCACCGGAGACTCCGCGTTTACCGCATCGTTTCGCTGATTCTTTTTGTCCTCTGCGTCCTGTTGCTGATCGTGGTGCTCGTGCTGCTTCTGAGGCTGACTGGGACGCCTCCATGTCCGGAGGTAGAGCAAACTACCAGGTCTCTACTGGAACATGAATGCACTCTGGGCAAATGCCAAGAGCTTCACCAACTGCCTCagcgTATGTGCAGTGACTGTGGCAAGGGCTGGCTGAGGTTCGAGAATACTTGTTACTTCCTGTCTCAAAACCGCCTCACCTGGCAGCAGAGCAGGGAGGAATGCCAGAGGATAGGAGGGGATCTTGCCATCATTACTAATGAACGTGTGCAGATGTATCTGAACAAGAAAGGGGATTTGCACTACTGGATTGGGCTGAATCATTTGGGGGCAAATAAATGGACATGGATTAACAACACTGTATTGACAGTGAGATATTGGGGAGATGTTTCTTCCCCTGGAGAGTGTGCCATCTTGGCTGCAAATGAACCAGCTGAACGGAGCTGGCACCCATCTTCCTGCGATTTATACCTACAGTACATCTGTCAAAAGATGTAGATGTCCTCAACCACACCCATTGACATCACATATATATCTGGATATCATATCAATCATAACAAGTCTTCAAGATTATCATCTTTTCTCTAAAGATCCTAGTCAGAAATAGTGACATTTGGTCCATCAACAcagtttttttgtacattttctgtgGATTATGGAGCATTATAGGTAGAGAAAAAGGCAGTTTTAGTAAATATcccatttatttgtattataattgaACTAATTTCTAACCAGATCGATCATGTATACAAAGCCTGTTTATTTGCACTAAATATGGTCTAATGGTCACACGATCATGTTCTGAATTGCTTTCTCTGAAATGTCTTTGTGTATTGCTTAAATAAACTTTCAcctttatatttaacaataaagagAACCACAATGCA

Function

NR:

description
PREDICTED: CD209 antigen-like protein 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260975.1 False 1403 mRNA 0.41 7 13673756 13678257
XM_043260976.1 False 1401 mRNA 0.41 7 13673756 13678258
XM_043260977.1 True 1864 mRNA 0.41 6 13673756 13676975

Neighbor

gene id symbol gene type direction distance location
rasip1 rasip1,LOC107549479,LOC107724795,LOC107744292,LOC107598383 coding downstream 69015 13592032 ~ 13604741 (-)
il11a NA coding downstream 100161 13565402 ~ 13573595 (-)
znf628 LOC107724809,LOC107549478,LOC107744293,LOC107598382,LOC107672962,LOC107692578 coding downstream 109529 13556250 ~ 13564227 (-)
nat14 nat14,LOC107724968,LOC107549449,LOC107744294,LOC107692586,LOC107672977,LOC107598397 coding downstream 117793 13552540 ~ 13555963 (-)
aicda aicda,LOC107549448,LOC107692585,LOC107724977,LOC107744312,LOC107598400,LOC107672983 coding downstream 125444 13546280 ~ 13548312 (-)
tpi1b tpi1,tpi1b,LOC107672981,LOC107724698,LOC107700200,LOC107744284 coding upstream 16501 13694759 ~ 13701743 (-)
gnb3a gnb3a,LOC107549492,LOC107672997,LOC108432288,LOC103042898,LOC102782474 coding upstream 75156 13753414 ~ 13760343 (-)
p3h3 p3h3,LOC107700158,LOC107724912 coding upstream 85746 13764004 ~ 13770786 (-)
cxcr3.3 NA coding upstream 157262 13835520 ~ 13838704 (-)
cxcr3.2 LOC107700152,LOC107551671,LOC107717417,LOC107598452,LOC107671173,LOC107755594 coding upstream 163050 13841308 ~ 13844368 (-)
G112390 NA non-coding downstream 14286 13659005 ~ 13659470 (-)
G112377 NA non-coding downstream 54420 13618687 ~ 13619336 (-)
G112361 NA non-coding downstream 64422 13606631 ~ 13609334 (-)
G112350 NA non-coding downstream 130445 13534721 ~ 13543311 (-)
G112327 NA non-coding downstream 202070 13449507 ~ 13471686 (-)
G112363 leng8,LOC107724921,LOC107700201,LOC107744285,LOC107672965,LOC107549486,LOC107598384 non-coding upstream 10248 13688506 ~ 13693963 (-)
LOC122360145 NA non-coding upstream 35602 13713860 ~ 13789086 (-)
G112410 clstn3,LOC107744281,LOC107724674,LOC107700197,LOC102784285 non-coding upstream 54930 13733188 ~ 13734148 (-)
G112369 NA non-coding upstream 99011 13777269 ~ 13778805 (-)
G112426 NA non-coding upstream 106757 13785015 ~ 13786453 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 1295307 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1806441 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 2261979 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 2286763 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 2387324 11269620 ~ 11286432 (-)
G112478 NA other upstream 556296 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 820005 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 904221 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1220924 14899182 ~ 14904907 (-)
LOC122359907 LOC107594909 other upstream 1230362 14908620 ~ 14913646 (-)

Expression


Co-expression Network