LOC122360412 (nek11,LOC107666729)


Basic Information

Item Value
gene id LOC122360412
gene name nek11,LOC107666729
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21056300 ~ 21102468 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260999.1
GTGGAACTCATGTGTCCGAACAAACTTCCGACGCACAGTTAACTGCTCTGCATTCATGCCTGAAAAATGCCCAGATTTCGTGAGCGACCAGGCCAAACTCACTGTCCCCCTGCCGCTCAAACACCTCCTGTCCAGAGCAGTCTGATAGCTAACAGATACATCATCCAGCAGAGACTCGGGAAGGGAAGCTTCGGCACTGTTTACCTTGTTAAAGACACAaaggcagcagcagcagagagacTGAAAGTGCTGAAAGAGATTCCTGTTGGTGGTCTGAAACCCAATGAGACGGTCCATGCCACTCAAGAGGCTCAGCTTCTCTCCCAGCTGAACCATCCTGCCATCCTCAAGTTCTACACCAGCTTCCTGGAGAGAGATGCCTTCTGCATCATCACTGAGTACTGTGAGGACAAAGATTTGGACTGTAAGTTGGAAGAGTTGAAAAGCACAAACCGGACGTTATCAGAGCCTCAGGTCTGCGAATGGCTCTGTCAGCTGCTGCTGGGAGTACATTACATACATCAGAGGAGAATACTTCACAGAGATCTaaaagccaaaaatatatttctaaggaagaatattgttaaaataggTGACTTCGGTGTATCCTGTTTGCTGATGGGGTCATGTGACCTGGCGACTACCTTCACAGGCACTCCATACTATATGAGCCCTGAAGCCCTCAGTCACCGAGGATATGACTCCAAATCCGACATCTGGTCTTTAGGCTGTATCCTCTATGAAATGTGCTGTCTGGTGCATGCTTTTGAGGGGCAGAACTTCCTGGCTGTGGTGATGAAGATTATAGAGGGACCTACTCCATCCTTGCCAGAAACATACTCATGGCAGCTCAACTCTCTAATGCAAAGCATGTTAGAAAAGGATTCTTCATGCAGGATCTCGGCAGCAGATGCGCTGAGGAGCAGGTTCATCGAGGAGAGCTTGCAGAGCATGAAACACAGGTTTTTTAGCTTGACGCTGCGAGACAAATCTATGGGGGGTGAGAAAGACGCGTCGCAGATCCTGAGAGCGCTGCAGAAGAAGGTACATCTGCAGACACTGCGGGAGAGATCAGAGGTGCAGAAAATGAGCCCGAGAGAACGCATGCGGCTCCGGAAACTCCAGGCAGCAGATGAGAAAGCAAGAAAGCTGAAGCAAATTGTGGAGGAAAAATATCAAGAAAACCACCTGCGCATGCAAGAGTACAAGTCCAAAAATTTCCAGAAAGTTAGTGTGGATGTTTTACAGGTGACAACCGAAGAAACAGTTAACCAGACTCAAGCAATTCAGAGTGAGACGCCAGACAGAAACTCCAAGCTATCAGAAAGCATTTCTCAAAACTCTGATAAGATGTGCAAGTCTGTGTCAAAAGACCATGCAATCCCTGAGGATCCTCAGGCGGCGGAAGCATTTTACTCAGTAGATGAATTTGAGTCATGCTCGGAGGAAGATTCAGATGGAGAGGAAGACTCAGAGGATAATCTCCCCACAGACCCTTCCTGTCAGACATGTGGACAGGATAGTGACCTGGAGGTCATGATCAGACACATGGAGGATGTTCTGAATGGTGACTCGATTGTATCTGATGCGGAGGAACAGAAGCCTCAGCTGGGTTCTCTGGGAGTGAATAGCATCAATACCTCCATGGCTGAGGGCAGAATACAGCGcatgagagaGACGGTGTGCCAGAAGCTAGGAGAGGAGGTGTTTCTGAAGGTCTATGACTGTCTGAAGCAGGCCCGACAGAAGCAGGAGAGTGAGGAGAACATCAGACAGGCTCTGATCCAGCTGGTGGAGAGGCCCGATGATTGCTTTGAAGTAGATCAACTCTTTATTATGAAGAGCTGCTCTCGGCGGCACAGGAGAACACCGTAAGATAActataaagcacacacacacctactcACATGTTGTCGGTCAACAACTATATAGATCAGCTTATGCACTTTTAAGATCTACCTGTGATGCAACTTCATATTGTAAGAGCACAAATACTTTGTTAGGGTTGTGCTTAATTTTAGGAATTTTACTGAGCAGCAATTCAACTTCACACAACAGAAAATGTATCCAACTCAAGTTTTGTTg

Function

symbol description
nek11 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in chromosome segregation; mitotic intra-S DNA damage checkpoint signaling; and regulation of mitotic cell cycle phase transition. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in centrosome; cytoplasm; and nucleoplasm. Orthologous to human NEK11 (NIMA related kinase 11).

NR:

description
PREDICTED: serine/threonine-protein kinase Nek11

GO: NA

KEGG:

id description
K20880 NEK11; NIMA (never in mitosis gene a)-related kinase 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260999.1 True 2085 mRNA 0.47 16 21056300 21102468

Neighbor

gene id symbol gene type direction distance location
LOC122360415 LOC107592535,LOC107666756,LOC107686539,LOC107709748,LOC107556976,LOC107733997 coding downstream 16765 21038523 ~ 21039535 (-)
LOC122360416 nek11 coding downstream 190076 20826228 ~ 20866224 (-)
si:dkey-11p23.7 si:dkey-11p23.7,LOC107717350,LOC107666731,LOC107600543 coding downstream 288935 20764638 ~ 20767365 (-)
aste1a LOC107666773,LOC107717364,LOC107600542 coding downstream 314628 20736949 ~ 20741672 (-)
ubxn11 LOC107600501,LOC107592913,LOC107713843,LOC107668295 coding downstream 349970 20699997 ~ 20706330 (-)
LOC122360714 NA coding upstream 259 21102727 ~ 21105217 (-)
LOC122360614 scap,LOC107600505,LOC107717374,LOC107591983,LOC107668298,LOC107713836,LOC107666822 coding upstream 18301 21120769 ~ 21138481 (-)
dek dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821 coding upstream 36702 21139170 ~ 21146077 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding upstream 65513 21167981 ~ 21169404 (-)
ccne2 ccne2,LOC107717358,LOC107666792,LOC107600548 coding upstream 213311 21315779 ~ 21321087 (-)
G114947 NA non-coding downstream 221065 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 287213 20768744 ~ 20769087 (-)
G114924 NA non-coding downstream 330629 20724171 ~ 20725671 (-)
G114908 NA non-coding downstream 376079 20677054 ~ 20680221 (-)
G114888 NA non-coding downstream 479026 20576686 ~ 20577274 (-)
G114997 NA non-coding upstream 15681 21118149 ~ 21120584 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding upstream 180996 21283464 ~ 21314746 (-)
G115051 NA non-coding upstream 228544 21331012 ~ 21331358 (-)
G115098 NA non-coding upstream 286347 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 722730 21825198 ~ 21825437 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 39195 21012607 ~ 21017105 (-)
G114901 NA other downstream 402726 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 405363 20636125 ~ 20650937 (-)
G114793 NA other downstream 603850 20441965 ~ 20452450 (-)
G114715 NA other downstream 878542 20166795 ~ 20177758 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 273422 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 307491 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 307492 21409960 ~ 21410031 (-)
G115116 NA other upstream 457753 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 503490 21605958 ~ 21614203 (-)

Expression


Co-expression Network