LOC122360415 (LOC107592535,LOC107666756,LOC107686539,LOC107709748,LOC107556976,LOC107733997)


Basic Information

Item Value
gene id LOC122360415
gene name LOC107592535,LOC107666756,LOC107686539,LOC107709748,LOC107556976,LOC107733997
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21038523 ~ 21039535 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261001.1
GTCAttgttatattgtgtttttcatcTTCAGGTAATCTACGTCGCTCGGAATCCTAAAGATGTTTTGGTTTCATCTTTCCACTTTCATCAAATGGCAAGTTTCCTTGATGACCCCGGAACATTTGAGGAATTTGTTGACAAGTTCCTGTCAGGAAAACTTTTGTTCGGTAAGTGGACCGATCATGTGAAGAGCTGGCGAAACCCTGAGCTCGGCGACAGGATCCTGTACATCACCTACGAGGAAATGCTTCAGGACCTCCGTGAAGTCCTGGGCCGGATTTTGCGGTTTCTCGGCCGGGAGCTCAGCGCCGAGGCTCTGGATAGAGTGGCCAATCGCAGcactttcaaaaatatgaaaacgaACAAAATGTCAAACTACTCTCTGGTGCCAGAAAACATTATGGACAACAAGAAATCGCCCTTCCTCAGAAAAGGTATCGCTGGAGACTGGAAGAATCACTTCAGCCCTGAACTCGATGCCAAGTTCACAGCTGTGGTTCGAGAGGAAATGAAAGGAAGCAACATCAGGTTCCCGTGGGATGAAGATTGAGTGAATCTCTTTTAATGGCGTCTCGGTGCGCATCAAAATAAACAGTCATTGATGGAACATGTGA

Function

NR:

description
PREDICTED: sulfotransferase family cytosolic 2B member 1-like

GO:

id name namespace
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261001.1 True 614 mRNA 0.46 4 21038523 21039535

Neighbor

gene id symbol gene type direction distance location
LOC122360416 nek11 coding downstream 172299 20826228 ~ 20866224 (-)
si:dkey-11p23.7 si:dkey-11p23.7,LOC107717350,LOC107666731,LOC107600543 coding downstream 271158 20764638 ~ 20767365 (-)
aste1a LOC107666773,LOC107717364,LOC107600542 coding downstream 296851 20736949 ~ 20741672 (-)
ubxn11 LOC107600501,LOC107592913,LOC107713843,LOC107668295 coding downstream 332193 20699997 ~ 20706330 (-)
mtdhb LOC107666798,LOC107717360,LOC107600499,LOC107668302,LOC107592090 coding downstream 351646 20681425 ~ 20686877 (-)
LOC122360412 nek11,LOC107666729 coding upstream 16765 21056300 ~ 21102468 (-)
LOC122360714 NA coding upstream 63192 21102727 ~ 21105217 (-)
LOC122360614 scap,LOC107600505,LOC107717374,LOC107591983,LOC107668298,LOC107713836,LOC107666822 coding upstream 81234 21120769 ~ 21138481 (-)
dek dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821 coding upstream 99635 21139170 ~ 21146077 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding upstream 128446 21167981 ~ 21169404 (-)
G114947 NA non-coding downstream 203288 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 269436 20768744 ~ 20769087 (-)
G114924 NA non-coding downstream 312852 20724171 ~ 20725671 (-)
G114908 NA non-coding downstream 358302 20677054 ~ 20680221 (-)
G114888 NA non-coding downstream 461249 20576686 ~ 20577274 (-)
G114997 NA non-coding upstream 78614 21118149 ~ 21120584 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding upstream 243929 21283464 ~ 21314746 (-)
G115051 NA non-coding upstream 291477 21331012 ~ 21331358 (-)
G115098 NA non-coding upstream 349280 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 785663 21825198 ~ 21825437 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 21418 21012607 ~ 21017105 (-)
G114901 NA other downstream 384949 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 387586 20636125 ~ 20650937 (-)
G114793 NA other downstream 586073 20441965 ~ 20452450 (-)
G114715 NA other downstream 860765 20166795 ~ 20177758 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 336355 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 370424 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 370425 21409960 ~ 21410031 (-)
G115116 NA other upstream 520686 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 566423 21605958 ~ 21614203 (-)

Expression


Co-expression Network