LOC122360416 (nek11)


Basic Information

Item Value
gene id LOC122360416
gene name nek11
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20826228 ~ 20866224 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261002.1
GAGGGCAGAATACAGCGcatgagagaGACGGTGTGCCAGAAGCTAGGAGAGGAGGTGTTTCTGAAGGTCTATGACTGTCTGAAGCAGGCCCGACAGAAGCAGGAGAGTGAGGAGAACATCAGACAGGCTCTGATCCAGCTGGTGGAGAGGCCCGATGATTGCTTTGAAGTAGATCAACTTCTTTATTATGAAGAGCTGCTCTCGGCGGCACAGGAGAACACCAGACCGGCAGAAGATGTGGTAATTAATGGAGCAGTCAAGCTAAAGGTTATTAGATTGCTCCGAGTCTGGATGGGAAATGTGAGACGGAGGACACAGAGGAAGGAGGGAGTAATTAACCAGGAGAGATTCTCCTTAGAGGTACTTCAGACATTATAAAGATGCAGGATGAAAACCTCTGCATAGCGACGCATTgattaaagggcatgatctacAGTTCAGTTGCATGtataatcattttaac

Function

symbol description
nek11 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in chromosome segregation; mitotic intra-S DNA damage checkpoint signaling; and regulation of mitotic cell cycle phase transition. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in centrosome; cytoplasm; and nucleoplasm. Orthologous to human NEK11 (NIMA related kinase 11).

NR:

description
serine/threonine-protein kinase Nek11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261002.1 True 463 mRNA 0.47 3 20826228 20866224

Neighbor

gene id symbol gene type direction distance location
si:dkey-11p23.7 si:dkey-11p23.7,LOC107717350,LOC107666731,LOC107600543 coding downstream 58863 20764638 ~ 20767365 (-)
aste1a LOC107666773,LOC107717364,LOC107600542 coding downstream 84556 20736949 ~ 20741672 (-)
ubxn11 LOC107600501,LOC107592913,LOC107713843,LOC107668295 coding downstream 119898 20699997 ~ 20706330 (-)
mtdhb LOC107666798,LOC107717360,LOC107600499,LOC107668302,LOC107592090 coding downstream 139351 20681425 ~ 20686877 (-)
si:ch211-225p5.8 LOC107686707,LOC107592124,LOC107666781,LOC107719166,LOC107737837,LOC107600541 coding downstream 218326 20604089 ~ 20607902 (-)
LOC122360415 LOC107592535,LOC107666756,LOC107686539,LOC107709748,LOC107556976,LOC107733997 coding upstream 172299 21038523 ~ 21039535 (-)
LOC122360412 nek11,LOC107666729 coding upstream 190076 21056300 ~ 21102468 (-)
LOC122360714 NA coding upstream 236503 21102727 ~ 21105217 (-)
LOC122360614 scap,LOC107600505,LOC107717374,LOC107591983,LOC107668298,LOC107713836,LOC107666822 coding upstream 254545 21120769 ~ 21138481 (-)
dek dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821 coding upstream 272946 21139170 ~ 21146077 (-)
G114943 NA non-coding downstream 57141 20768744 ~ 20769087 (-)
G114924 NA non-coding downstream 100557 20724171 ~ 20725671 (-)
G114908 NA non-coding downstream 146007 20677054 ~ 20680221 (-)
G114888 NA non-coding downstream 248954 20576686 ~ 20577274 (-)
G114853 NA non-coding downstream 306102 20500520 ~ 20520126 (-)
G114997 NA non-coding upstream 251925 21118149 ~ 21120584 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding upstream 417240 21283464 ~ 21314746 (-)
G115051 NA non-coding upstream 464788 21331012 ~ 21331358 (-)
G115098 NA non-coding upstream 522591 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 958974 21825198 ~ 21825437 (-)
G114901 NA other downstream 172654 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 175291 20636125 ~ 20650937 (-)
G114793 NA other downstream 373778 20441965 ~ 20452450 (-)
G114715 NA other downstream 648470 20166795 ~ 20177758 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 1168504 19596432 ~ 19657724 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 146383 21012607 ~ 21017105 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 509666 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 543735 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 543736 21409960 ~ 21410031 (-)
G115116 NA other upstream 693997 21560221 ~ 21561216 (-)

Expression


Co-expression Network