oscp1b (oscp1b,oscp1,LOC107588491,LOC107705542,LOC107704985,LOC107755648,LOC107700711)


Basic Information

Item Value
gene id oscp1b
gene name oscp1b,oscp1,LOC107588491,LOC107705542,LOC107704985,LOC107755648,LOC107700711
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25072879 ~ 25080305 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261047.1
ATTTATTCTGCAGGATCTTCGGAAAGCGCAGGTCGCGTCTTTTTACTGACAACCTGTAATTGCTTCCCGATACTAGCTGCTCTTCATCCGTCTCCAGAGAGGATGTCGACGCGAACGCTGCCTCTGCTCTTCATTAATTTGGGCGGAGAAATGCTCTACATCCTGGATCAGCGCCTGCGGGCTCAGAATATCCCGGCAGATAAAGCTAAGAAAGTTATGAATGATATCATTACCACCATGTTCAATAAGAAGTTCCTGGAGGAGCTGTTCAAACCACAGGAGCTGTACTCCAAGAAAGCCCTGAGGACAGTGTTCGACCGACTCGCTCACGCCTCCATCATGAGACTCAACCAAGCTAGTATGGACAAGCTCTATGATTTGATGACTATGGCATTCAAGTATCAGGTCCTGCTGTGTCCTCGCCCTAAAGACATCCTCCTTGTGTCCTTTAACCACATGGATGCCATCAGGGACTTTGTGAAAGACACTCCCAGCATCCTCAGCCAAGTggatgaaacaaacaaacagctcgTAGAGATCTATACACCTTTATCTGGTGGAGAGTTTCAACTAATTAGACAGACACTTCTCATCTTCTTTCAAGATATGCATATAAGAgtATCAATTTTCCTTAAAGACAAAGTACAAAACTCCAATGGACGATTTGTTCTCCCCACATCAGGCCCTGTTCCATATGGGACGCACTCCCCAGGACTCATAAGAATGTTTAGCTGTAGTGGTGAGGAGGTGAGAAGGACGCAGTTCCGTGACGGTGGCAATTACTGCAGCGCTCTCCGTGAGGGTTCTTTTGAAATGTATGGTGACCGAGTCATCAAACTGGGCACAAACATGTACAGTGTGAGTCGCCCTGTTGAGACACACATGTCTGGAACCTCCAAAAACTCCTCACAGCACATTAAGGTCAACACAACCCCAAATCCTTTGGCAAAAGAAGAGCTGAACCTGCTTGCTAGACTTATGGGAGGTCTGGAGGTGCAGAAATCAGCTAACACTGACTCTGGCTTCCGTGTGAACCTTTTTGCCACCGACGAGGAGGAAGAGGAAGCTTTGATATCAAGACCGGATGAGCTTTCCTATGAAGTTATTAATATCCAAGCAACAAAGGACAAACAGACCAATGCGGAGCTGGCTAAGATCATGGGGGAGTTTGGAGAGACGGGAGAACCCGCCCCCAGTTCCAGCAGCAAAGGTGACGACCTCCTGGCCATGATGGATGGACTGTGACTTAAACTTGATGTTCCCTTTGACTGAGCAGAGTGACTGAGCTGTTAAGCAGGATGAAGTGCTACAATGTCTTACTCAGCAAAGAGGCCTTTTGTCTGGAGCTACAGTGACAACCGTATATATTTAGAACGAACTTCTCTTTTTGAGAATTTCACAGTTTTCGTCTCCTGCCACCCACCGAATGTGAGAAATGCAGATAGCAGGTGTAGAAATGTAATATGTGTCTTGCTGTGGGACCAtattcactttttcattttcgTTTTGTCAAGTTACTTTGGACCTACTGAGACGGCACAGGCCGTATCATCACGTATTTCAGCGAATGGTTTGATACGAGGCTTCACAGAAACATCTGCGTGGCTTTCATTTAGATCAGTGGACAGAATAAAACGCCTTTTCTGGACTCTTTTAGTTGTCTAAGAGGACAATCTGTGCTCATGGAATTCATTTGATACACTATTTGACGTGTGGGATATGCATCCGAACAACAAGCGCTGATTAAGACAGGGTAACGGAGGAAACCAAAGTGCACTTGCAGTAAATATTTAGTGCAGATCCATAGAAATGGTTTACAGGAAGCCCAAGGACAgttaatgtgtgtatgttttctttgtctttatttaaagggagtGCAACAAAGTCAGGTATTCCGAGCtgaagaatttaaaatgtcttagaCATTCATGTAAAGGGACAATGTATACAAGAACCCACCTTTCATtggaaaaaaagcaatgcaataTGTATGGTGGatgaaattgtttatttttcataaccATAATAGAGCTTATTTATTGAGGGTTAATGTACTGAATGTTCATTTGTATCTGTTTACGGTAATGGTAAAATAGATTTGAATGTGAAATAAAGTAGGTCTTTTTGCAAA
>XM_043261049.1
ATTTATTCTGCAGGATCTTCGGAAAGCGCAGGTCGCGTCTTTTTACTGACAACCTGTAATTGCTTCCCGATACTAGCTGCTCTTCATCCGTCTCCAGAGAGGATGTCGACGCGAACGCTGCCTCTGCTCTTCATTAATTTGGGCGGAGAAATGCTCTACATCCTGGATCAGCGCCTGCGGGCTCAGAATATCCCGGCAGATAAAGCTAAGAAAGCCACTGTAGCAGATTGGCTAGAGGAGGACAGAAAAAGAGTTATGAATGATATCATTACCACCATGTTCAATAAGAAGTTCCTGGAGGAGCTGTTCAAACCACAGGAGCTGTACTCCAAGAAAGCCCTGAGGACAGTGTTCGACCGACTCGCTCACGCCTCCATCATGAGACTCAACCAAGCTAGTATGGACAAGCTCTATGATTTGATGACTATGGCATTCAAGTATCAGGTCCTGCTGTGTCCTCGCCCTAAAGACATCCTCCTTGTGTCCTTTAACCACATGGATGCCATCAGGGACTTTGTGAAAGACACTCCCAGCATCCTCAGCCAAGTggatgaaacaaacaaacagctcgTAGAGATCTATACACCTTTATCTGGTGGAGAGTTTCAACTAATTAGACAGACACTTCTCATCTTCTTTCAAGATATGCATATAAGAgtATCAATTTTCCTTAAAGACAAAGTACAAAACTCCAATGGACGATTTGTTCTCCCCACATCAGGCCCTGTTCCATATGGGACGCACTCCCCAGGACTCATAAGAATGTTTAGCTGTAGTGGTGAGGAGGTGAGAAGGACGCAGTTCCGTGACGGTGGCAATTACTGCAGCGCTCTCCGTGAGGGTTCTTTTGAAATGTATGGTGACCGAGTCATCAAACTGGGCACAAACATGTACAGTGTGAGTCGCCCTGTTGAGACACACATGTCTGGAACCTCCAAAAACTCCTCACAGCACATTAAGGTCAACACAACCCCAAATCCTTTGGCAAAAGAAGAGCTGAACCTGCTTGCTAGACTTATGGGAGGTCTGGAGGTGCAGAAATCAGCTAACACTGACTCTGGCTTCCGTGTGAACCTTTTTGCCACCGACGAGGAGGAAGAGGAAGCTTTGATATCAAGACCGGATGAGCTTTCCTATGAAGTTATTAATATCCAAGCAACAAAGGACAAACAGACCAATGCGGAGCTGGCTAAGATCATGGGGGAGTTTGGAGAGACGGGAGAACCCGCCCCCAGTTCCAGCAGCAAAGGTGACGACCTCCTGGCCATGATGGATGGACTGTGACTTAAACTTGATGTTCCCTTTGACTGAGCAGAGTGACTGAGCTGTTAAGCAGGATGAAGTGCTACAATGTCTTACTCAGCAAAGAGGCCTTTTGTCTGGAGCTACAGTGACAACCGTATATATTTAGAACGAACTTCTCTTTTTGAGAATTTCACAGTTTTCGTCTCCTGCCACCCACCGAATGTGAGAAATGCAGATAGCAGGTGTAGAAATGTAATATGTGTCTTGCTGTGGGACCAtattcactttttcattttcgTTTTGTCAAGTTACTTTGGACCTACTGAGACGGCACAGGCCGTATCATCACGTATTTCAGCGAATGGTTTGATACGAGGCTTCACAGAAACATCTGCGTGGCTTTCATTTAGATCAGTGGACAGAATAAAACGCCTTTTCTGGACTCTTTTAGTTGTCTAAGAGGACAATCTGTGCTCATGGAATTCATTTGATACACTATTTGACGTGTGGGATATGCATCCGAACAACAAGCGCTGATTAAGACAGGGTAACGGAGGAAACCAAAGTGCACTTGCAGTAAATATTTAGTGCAGATCCATAGAAATGGTTTACAGGAAGCCCAAGGACAgttaatgtgtgtatgttttctttgtctttatttaaagggagtGCAACAAAGTCAGGTATTCCGAGCtgaagaatttaaaatgtcttagaCATTCATGTAAAGGGACAATGTATACAAGAACCCACCTTTCATtggaaaaaaagcaatgcaataTGTATGGTGGatgaaattgtttatttttcataaccATAATAGAGCTTATTTATTGAGGGTTAATGTACTGAATGTTCATTTGTATCTGTTTACGGTAATGGTAAAATAGATTTGAATGTGAAATAAAGTAGGTCTTTTTGCAAA

Function

symbol description
oscp1b Orthologous to human OSCP1 (organic solute carrier partner 1).
oscp1 Enables transmembrane transporter activity. Involved in xenobiotic detoxification by transmembrane export across the plasma membrane. Located in basal plasma membrane and cytoplasm.

NR:

description
protein OSCP1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261047.1 False 2131 mRNA 0.44 10 25072879 25080305
XM_043261049.1 True 2170 mRNA 0.44 11 25072879 25080305

Neighbor

gene id symbol gene type direction distance location
stk40 stk40,LOC107704982,LOC107755633,LOC107588492,LOC107705547 coding downstream 1654 25053698 ~ 25071225 (-)
eva1ba eva1ba,LOC107700680,LOC107556086,LOC107734091 coding downstream 39538 25020716 ~ 25033341 (-)
LOC122360137 LOC107755513,LOC107705663,LOC107556091,LOC107704976,LOC107588498 coding downstream 166358 24892846 ~ 24906521 (-)
ctps1b ctps1,ctps1b,LOC107704971,LOC108433599,LOC108415321 coding downstream 226726 24839929 ~ 24846153 (-)
taf12 taf12,LOC107566933,LOC107588503,LOC107755488,LOC107700725,LOC107705731 coding downstream 233092 24836086 ~ 24839787 (-)
LOC122360438 LOC107588526,LOC107755659,LOC107700712,LOC107704880,LOC107705924,LOC108433590,LOC103032252 coding upstream 152 25080457 ~ 25082777 (-)
mrps15 LOC107705916,LOC107704881,LOC107700664,LOC107756143,LOC107556076,LOC107588515 coding upstream 2608 25082913 ~ 25089706 (-)
capn7 capn7,LOC107705521,LOC107755679 coding upstream 27093 25107398 ~ 25118453 (-)
pik3r4 pik3r4,LOC107556101,LOC107755706,LOC107588487,LOC107705468 coding upstream 81458 25161763 ~ 25172461 (-)
calb1 calb1,LOC107704882,LOC107588486,LOC107700706 coding upstream 99525 25179830 ~ 25190749 (-)
G116164 LOC107588518,LOC107755478,LOC107700723,LOC107588502,LOC107705715,LOC107704972,LOC107566931 non-coding downstream 237515 24835099 ~ 24835364 (-)
G116179 rab42 non-coding downstream 238921 24833536 ~ 24833958 (-)
G116174 NA non-coding downstream 249469 24821501 ~ 24823410 (-)
G115954 NA non-coding downstream 884285 24187937 ~ 24188594 (-)
G115939 NA non-coding downstream 995012 24077631 ~ 24077867 (-)
G116242 NA non-coding upstream 97147 25177452 ~ 25178607 (-)
G116237 NA non-coding upstream 131088 25211393 ~ 25558018 (-)
G116264 NA non-coding upstream 613804 25694109 ~ 25695357 (-)
G116247 LOC107568872,LOC107688200,LOC107728981,LOC107592106,LOC107707640,LOC107671434 non-coding upstream 624395 25704700 ~ 25706796 (-)
G116282 NA non-coding upstream 696431 25776736 ~ 25778404 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other downstream 599514 24414226 ~ 24473365 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other downstream 703313 24364640 ~ 24369566 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other downstream 733091 24317482 ~ 24339788 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 1397534 23668065 ~ 23675345 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other downstream 1463038 23582993 ~ 23609841 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other upstream 584414 25664719 ~ 25710686 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 1299367 26379672 ~ 26384187 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other upstream 1341413 26421718 ~ 26507052 (-)
G116654 myom3,LOC107659064,LOC107729819 other upstream 1726815 26807120 ~ 26809146 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other upstream 1730012 26810317 ~ 26812974 (-)

Expression


Co-expression Network