G10672


Basic Information

Item Value
gene id G10672
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16226287 ~ 16231126 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11754
TGGGGTCTATGGTGAAATATATGCGTTGAGAATCAAGGATTTGGAAAACAAGCTTCCCCTCAGAGGACTTGTCCATGTCTGTGGCAGATACTTTTAGAACAGATTTGTCCTTTGGCAAATTCTCTTGCACTGAGCCAAAGTAGACAGGCTGGGACAGCTCAGGGGGATTGTCATTAATATCCCAAACTTCGATGTAGACCTCAGTCCAGGATAGCAGTGGTACAGTGCCCAGATCTTTTGCATAAACTGTCAGCCAATAGTGTGGCACAGCTTCACGATCCATAAGGCCTGCGGTCCGAATAACACCTGTTTCTTCATCGATCGTGAAGACGCCAAGCCCTGAACCATCATGGATGTAGTATCTGACTACTCCATCTCGTCCTAGATCGTTATCTACAGCTGTTAGTGTTAAGACTGAAGTTCCTATTGTAGCATCTTCCATAACGGCTGCGTTATGCACAAAAAGAGTGAAGAGAGGCCGGTTCAGGTTTTCGTTGACATCTAACACTTCGACCTCAATGAAACATGAAGACGATAAAGACCGGGGCTTTCCATGGTCTACAGCTCGAACCGTTAGATTATAAGACTGCTGCCTTTCAAAGTCCAGTTCACGCTCCAGAGTCAAGCAGCCTGTGGATGTATCCAGGAAAAACGTCCCTGATTCACTGTTTTTTAGGTTGTAGCTTATGCGCCCTCCGCTCTCCAGATCTAAATCAAAGCTTTCAACCCATAACAGCACTGTGCCTGGAGGAATGTCCTCGGGAACTTTGATCCTGTAGACTGTGGGTACGAACTTTGGAGGATTGTCATTGATGTCCTCCAGTACAACCACCAGATCTACAAACGAGAAAAGTTGTGGGTCCAGTTTGGCTTGATCTCTGGCCTCAATTGTCAGGTCATATCTACTAAAGGTCTCTCTGTCTAAAGGCCCAGTTACCTGCACCACTCCTGTAATTTCATCAATTTTGAACAAATCGGTGAAGGTTAACAATGAATATTTAAACGCTCCATTGTCATCCGAGTCAAAATCGACTGCACTGACTTTGAAGATGCTTTTGTCAACCTCTGTGTTTTCTGGGATGTTCACCACATATCTTGGCTGAGAAAATAACGGAGGATTATCATTGGCATCAAGAATACTAACAGCAAGAAACTTCCACGTAGAGATTTGTGGAGATCCCAGGTCGTACACAGTTATGTTGAGAATGTAGAACTCTTTTTGCTCTCTGTCCAAAGCACAGATAACCTTCAGGTCCCCTGTGTTCATGTCAATAGTAAAACATCCATCCTCATTTCCACTGGAAATTGCATAGACAAGCTTTCCGTTAAAGCCAGAGTCATTATCAGTGGCATTAAACTGCAGCACAGATCTATTGAGAGCAAAGTCTTCCCTGATGTCGATCGAGCTCGGTGTGCCCGTGATAAACTTTGGAGAGTGCTGGTTAATTATATGAACATCCGAGATAGACTCTTCTTCTTTGACCGTGAGAGACGGCTTAAACGACTCAATAAGCTTCTCCGTCATCTGCCTAGTAATTCCGGTCTCCTCGCAATATGTGGTGGCACCTTCGCCCTTGCCTGTGATACGTACGGTCACGGTGTTGGGATCGGCACTATGTTTGCCATCTGTTGCTGTTATTTTAAGTAAGTATGTGTCTTCATAATTTGAGGGAATGGCTCTAAAAAGTTTAATGGTGCCAGAAACAGGGTCAATTGTAAACAGGCCGTCATCATTCCCAGATTCTATCCTGTATTTGATCTGCTGCAGCTCATCCAGATCGAGTGCTGACATCTCTGTAATACTCTTCCCCACAGCAAAGTCTTGGGGTATGGAGGCATTGCATGCCACCCGCTCAAACACTGGAGAGTTGTCATTGATGTTGGTCATGGTGATTGTTGCAGAGCATTCGCTAACTCTGTTAAAAGGGCTGCCGCTATCAGAGGCCCATATTCTCAGGTGGTACCATCTCTTCATGAGCTCATAATCGAACTCCTGAGAGGTCGAAATCACACCGGTCAGTGGGTCGATATTGAAAGGAACGGGACCGGTGTTTGCTATAGCGTAGGTTACAAAACCATTGTTATCTTTGTCCACATCAATAGCAGAGACAGCTAAGATGCTTGTTCCGATTGGGGCATTTTCAGGCAGAGAAGCCTGGTATGAAGGCAATGTGAACCTAGGGGCATTATCATTTTCATCAATTATATCCACAACGACACGGGTAACCGCTTCTCCATCGTTCGCAATAACATCAAACTCATAATGAGAGTGCTTTTCAAAATCAAGGGACTGAGAAGTCACAATTACACCAGTTTTGGCACTGATTTTGAATTTACTGCTATCAGGGTTTTCTTTGATGCTGAAGGTTGTGTTTTTGAAACTCAAACCTACAGATACTCGAACCACGTGACTTTTCGGTGGAGAAAATTCACTGAGGGTGACATAATAGAGTTCTTGTTCAAATGTCAAGGGTTTAACTTGCTGCGGAGGAGGAGGAATATGCACTGTTTGTATTGGTGTTTGCAGAGGAGGGACACTTCTGTCTTTGGCCTGAAGGGAAATGTTTAGTCCAAGTGGGTTTTGTGACCAGTCAATCCATTTTGTTGAGACAAGCTGAAAGCCACCCTCATACAAAGTAGATGGAATAATCTGAAAGCACTTTTGCGGATCGCCTTCAACTATACTTAAAGACGCCACTTTCTCTTTCTCCTTGGGTTCCATCTCGATATTCACGATTATTTTGTCGTCATCCGTTTGTGCACTAGTGGGTGCAATGAGGGTAAAGTTTTCTGCCACTTTTTGTATGGTCACAACAACTGTTGCTACATTTCCAAACTTCTGCACACCAGAAATTTTCTTTGTCCTGTCCTCTGCCAGCACTGTTAGGTCATACCTGTCTCTCTGACTGGCGTCTAGTCTTTTGACAAGTGTAACGGTCCCCGTGAAAGGATCAACGGCAAATGGGTGTGATCTTGTGGTGAATGAGTAATAAAAGTCTGCATTGCTGCCGATATCAGCATCCGTTGCGCTCACTCTCACCAGGCTCGACTTGATCGGTGTGTCTTCTTTGATTAGCACATTATAAGAGGCAGGGTAAAAGAGCGGTTTCAGATCATTTGTGTCAAGCACCTGGATCAATACCTTTGTTCTAGCTCGGTTCTCATAGGTACTTTCTATAGCCTCAACGGTGAGAGTGTAAATGTCTCGTACCTCTCTGTTCAGCACAGCTGAGTTACTGCTTCTGGTTTTGATTCTCAGAAAGCAGAAATCACCTACGCTTTCCTCCTCGGCTTTGAAAAGGCCATCATCATCACCAGAGACAACCTTGTACTTGATGTCCCAGAAGGGATCAGATAGTAAGATGCCCATTCGGACTGGGTTCTCCACATAGGTCCTGGGGGCAGAGTTCTCATAAATGCTCGCATTATACAAATGATGGGTGAACCTCAGTAGAGAGTTGTCTTTAACCAGGCTCCCCTGACATCTGGTTAACATTCCTAGGACTGCTATGACAGTGAGAATTATGGCTGTGTCTGTGAAAGCCATTCTCACCGTCTCAACATGGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11754 True 3570 TUCP 0.45 2 16226287 16231126

Neighbor

gene id symbol gene type direction distance location
CI01000000_16191231_16195841 GM2A coding downstream 30446 16190861 ~ 16195841 (-)
CI01000000_16188243_16189302 NA coding downstream 36985 16188159 ~ 16189302 (-)
CI01000000_16167132_16171442 CCDC69 coding downstream 54845 16167052 ~ 16171442 (-)
CI01000000_16085128_16085979 NA coding downstream 140227 16084573 ~ 16086060 (-)
CI01000000_16058344_16063500 GPR137BB coding downstream 162659 16057946 ~ 16063628 (-)
CI01000000_16302021_16337921 SLC36A1 coding upstream 69515 16300641 ~ 16337921 (-)
CI01000000_16354158_16360016 NA coding upstream 122833 16353959 ~ 16360213 (-)
CI01000000_16395230_16423976 GLRA1 coding upstream 163006 16394132 ~ 16423976 (-)
CI01000000_16583129_16583311 NA coding upstream 351988 16582968 ~ 16583471 (-)
CI01000000_16628234_16631045 THOC3 coding upstream 396571 16627697 ~ 16631814 (-)
G10764 NA non-coding downstream 14072 16211611 ~ 16212215 (-)
G10642 NA non-coding downstream 120570 16015389 ~ 16105717 (-)
G10723 NA non-coding downstream 124905 16096564 ~ 16101382 (-)
G10646 NA non-coding downstream 134241 16081559 ~ 16092046 (-)
G10674 NA non-coding downstream 217903 16007692 ~ 16008384 (-)
G10668 NA non-coding upstream 10394 16241520 ~ 16254522 (-)
G10669 NA non-coding upstream 25393 16256519 ~ 16260121 (-)
G10825 NA non-coding upstream 243904 16475030 ~ 16475373 (-)
G10827 NA non-coding upstream 249253 16480379 ~ 16480815 (-)
CI01000000_14200000_14436182 TENM2 other downstream 1727693 14200000 ~ 14436253 (-)
G9602 NA other downstream 1879753 14341002 ~ 14346534 (-)
G9036 NA other downstream 2499197 13726800 ~ 13727090 (-)
G8699 NA other downstream 2914858 13272585 ~ 13311429 (-)
G8125 NA other downstream 5185378 11040269 ~ 11040909 (-)
G11107 NA other upstream 435992 16667118 ~ 16667947 (-)

Expression


Co-expression Network