G10668


Basic Information

Item Value
gene id G10668
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16241520 ~ 16254522 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11750
AAAGAATTGTGGAGAAAGTCTGATTCACATTACATGTGATGTCAAAGGCAGTATGATAACTATCTAAATATCTATGCAATTTAGATATTTTATTACTAATATTTAGATATTGAATCTGCAGAAATAACGCAGTCAGCTTTAGAAAATCTTTATGGATGTTCAGTGACAGTTAAGGAAAAGTGTGATACCTGCAGAACCATGTCCCCAGGTGAAATGTCCTCTGCAATCACGGTTCTGTAGCTACTGCGGTTAAAGACAGGTGGGTTGTCGTTGACGTCTGTGATATTGATGATAACCGTGGCAATGTCACTGAGCAGTGGTTTGCCCCTTGCACCCTCCACTGACAGGTAATACTCGCGGCAGAGCTCAAAATCCAGCGCAGCGTTCAACGACAGCAACCTGTCATGGGGTTTATCTGGAATCGTCCATCTTCATTGCCAGAGAGGATAGTATATCGCACAGGCTCATTATCGGTGCCATCTTTAGTGAGGGCAGACACACTGATCACCTCCGATCCGATCTGGAACGATTCTGGGATCTGTACATAGTACTCCGAGCTAAGAAACAATGGCTGGTAATCACTCAGGATGACCACATGAACAGAAATGGTGGCAAAGGAGAAAAGTCGAGGGAGGCCACGGTCTGTGGCTTTTACTTTCATCTCATAAGTGGACTTGGTCTCATCAGCTAGAGATCTCTCCAGTCTCAAAATGCCTGAGATTTCATCTAGGGAGAAGAAGCCACTGTCGGCACCTTGAAGAGAATACCTCACCTCTGAGTTTATACCTGTGTCTGGATCTTTGGCATAGATGACAGCAATAGGCGTCCTAATTGTGGTGTTGTCAAACACAGTGATTTCATAATGGCTCGTGGAGAATTGCGGCGAGTTGTCGTTCATGTCCTGCACCATGAGTGTGACATCTGCCTGACAAGAGCGGCCACCACCATCAGTCGCTTTGACAACAAGATCATACGCTGATTCCTGCTCGCGATCCAAGACTGCAAGGGTGAATAGCTCACCAGTTTTGGAGTCAAGATGGAACTTGTCTGCATTAGGTCCATGAAGAGTAAATGACACCAGGCCGTTTGTTCCAATGTCGGGATCAGAAGCAGAGATCTTCAGGATGAACAAGCCTGATGAAGAATTCTCCATGACTGTCTCGGTATAAAGTAATTGCTCACACAAAGGACTGTTGTCATTGAGGTCAAGAACATGGACTTCAACATTGGCAGAGGTTTGAAACCTTCCATCTGTGGCTATTACATTAAGGGTGTATTTGTCTTTGTCCTCTCTGTCAAGCGGACTTTTGGAAATCACTGTCCACTCGTCCCCTGCTGCTGTGACTGAGAACTGGCCCAATGGGTCTCCATCTGTTATATAACATACAATCTGTCTATTTTCTGCAGACACATCTTTATCAGTGGTTGTCAGAGTGACAATGGCTTCTCCAGGCCTGCTGTTCTCTAGGATGGACCCTTGGTACAGTTCCTCTGTAAACTGGGGTGGGTTATCATTTTCATCTGTGATAGTCACCTCAACTAGAACTGAAGAGGTCAGTTTGACAGTGTCACCATGATCAGTGGCCACCACATAGAATCTATGAAGCTGTTTGGTCTCAGAATCAGCCTCCTTTAAAGCAATAATCCAGCCAGTTTGCGAATCAATTGTAAACATGTCGCCAATATCATCTGACTCCGGCTCAACTGTATATGAGACTTCTCCGTTGACGTTTGTGTCTGCATCATTAGCTGTCACTTGAATAACCGTGGTGCCAGGGGGCAAATTCTCAGCCAGGAAGGCCTTATAGGGGTCGGCCTCAAACATAGGCCGATTGTCATTAACATCTTGAACCTCTATGTGAACAGACACAAGAGATGCAACATCGGTGCCATTGTGATTTCCTTGAGCGATCACATCAATCTTGTATACTTTGGTTTTTTCATGGTCAATGTTCTTCTGGACCACAACTGTACCGCTATCTTTGTCGACAGCAAAAGCATGCTCTTTGTTGCTGTCTATAGTGTTGCCATTCACCAAGCTGTATATAAGCGGCATGTCAGCATCTGCCTTGACTGTGCCTATCTCATATCCAATAGGGAGATCCTCAGATGCTGAGAAAGAGTACAATGGCTCGGTAAACCGGGGCAGAGTGATCTCTGGTGGGACCACCTTGACCTGTACTGGCACAGAGGAGTTGTAAAAAGGAATGCCTCCATCTCGAGCCTTAACTTTGAAGGTGAAAATCTTATTCTCCAAACCAACAAGACTCTCTTTGACGCTGACCACTCCGGTAAAAGGGTTGACCTCAATAACATCTTCAGTAACCTCCTCCGCTTCTTCTACTGTGTAAGTGACGTCAGCATTTTTACCTTCATCTGCATCATAAGCCATTATCTGTATCACTGGCGAGCCTTTGTTTACTGTGGATTGAATGGAAATCTGATACTCTGAGGCTTTAAATTGAGGGATATTATCATTCTCATCTGTCAGAATGATCTTTACAGTGCAAAACCCCACTCTTCCTCCACCATCCTTAGCCATGACCTTAATCGCGATAACTCTTTGCGATGGATTTTCTCTGTCCAATGACTGAGAAGTCACAATTTGTCCATCTTCATCGATGGAGAACTTCTCATCGGCAAGCTTGTTAATTATGGTGTAGTCTACACTGCCGTATGGCCCATCATCCGGGTCAATAGCAGCCAGTCGGATCACACGAGTTCCCACTTCGGCATTCTCAGCCAGATCTGCCTCGTAAATGTTCTGGCTAAAATAGGGGCTGTGCTTGTTGCCGTTTGTCATGTCAATGTTAACAGGGGCAGTCTTCTGAAACACACCATCGGAAACTGCAACGGTGAGGTTATAAAATGGATCCAGGTTTCTTTTGCAGACATTAGAAAATGAGATAAGTCCAGATGATTCATTAATAGAGAAATATCTCCCCTCATTGCCAGATAGGATCTTATATTGGAGGTCATCCTTACTATCGGGGTCTGAAGCCTGAACTTTGATAACGATGTGGCCACAAGTGGCCATTTCATCAAGAGAGGCCCGATAAGATGGCTCACTAAAATCTGGAGGGTTGTCATTGACATCTATGACGTTCACAATGATGTGAGCCTCACCGCTGAGCGGTGGTGCACCTTTATCTGTGGCTTTAACTTTCAGAGTGAACTGCTGCGTGGTTTCATAGTCCAATACTTGCAATGTCACCAAAATCCCACTTAGTGGGTCAATTTCAAAGAAATCACTTTTGTCAATCAATTGGTAAGTTACATCTGAATTTCTGCCTGAATCTTTGTCAACAGCTGAGACCTGTAAAACAGATGTGCCTATTGGAAGGCCCTCAGACACATCTGTAACATAAGACAGATTCTGAAAGACAGGGGCATTGTCGTTTATATCTTCCACATCAATCTCTACTTTGGCTTCGCTAAAGGTACCAGTCACCGAATCTGTGGCACGAACAGTCAAAATATGCTTTGTTTGAGTCTCAAAGTCTAGGAAATCAGTGACACTTAAGACCCCTGTTTTGAAATCGATGTTGAAAAACCTGGAGGCGTTGTCTTCCTCTAGATTGTAGATAAGGCGGTATCCTTCTGGGTTTCTTGCTTGCACATGCAGAATCGTTGTAAGAGGATTAATATTCTCAGGTAATTTCAAAGGGTAGTACTGGCTTTGAAATATTGGATGAGAACGATTTTGCACTTGGATGTAGAGTGTCCCGGCGGCTGACAGACTCGGCTCACCCTCATCTGATACCAGTACAGTGAGCACATATTTATTCATAGACTCAAAGTCTAAAGGTCTTTTAAATGACACATCCCCAAGATAATCGTCGATCTGGAAGAGACTGAAATCATCCTCCAGTAAAAATATTATAGATCCATTCTCACCGAAGTCGTCGTCGGTCGCTAGCACTTGAAAGAGAACATCCCCTGGTTCAGTTTCCGCCGATATCATCAGTGAATGAGGCAAATTTGATATTTTCGGTGCATTGTCATTGATATCATCTATATAGACCTTAACATGAGTGACATCCACACGTGGTGGATGCCTCATGTCTCGGACCTCCACGGAAACATTGTACTCATCCTGCTCCTCCCGATCAAAAGGAACTCCGGTGGTCTGCAGGACTCCAGATGATGGAACCACCGCAAATTTCCTATGTGGGTTCAAAACAGTGTACTGCAAGGGCTCGTTCAGATAGCTACCTGTTGCTCTCAGGACGGCTAAAGTTTTCACAGATGTAGTGTTCTCCAGTACAGTGGCTACATGCATCCTGTCCTCAAACTTCAGACTAGTCTTTGTTGCATTGGTGATATTGAATTTCACTAGGGTAGTGTCTTTATATAACCCATCGGAGGCAGTTATCTTCAACTCATTATGGGACTGTAGATCAGATGAATCATTCACTGAGATGATTCCAGTGGACTGGTCTATTTTAAATGCATTTTTATTACGACTTTCCGAAATCATGTAGGTGACTGCTGAATCTGCATCATGAGCCGTCACTTGGATCACTTTCATGTCTTCAAAAACTGGTAAGGTCAAGGCAGTTTCATATACAGGTAAAGCAAATTTGGGCGGACAATCATTAAAGTCCAGGACACGAATGTTTACTCTGCAAGGCTTGGAAGAACTTAGCGATGGCTCACCAGAATCCCACACCTGAACGCTGAAGAAAAATTCAGGTGTTTCCTCAAAGTCAACTGTACTCTTTAAGAAGATGGTACCCATACTCGGATCTATTTTAAACACTTTCTGAGCTGCAGGCTCAAGGATTTGGAAGACCAGAAGTGCATTTTTGTCTTTGTCCGCATCTGACGCCTTGATCACCAGTGGCGTGTTGTTCTCACCAGTCACTATGCTGTTTATGGGCGCAGACTCACTAATCTGCCCGTAATAAGTGTTCTGACGGAAAACAGGGGCGTTGTCATTTTCATCTATCACATAAATGTAAATAACAGCATCAGATGAGACTCCTGCTGTATTTGTAGCTCTTATTTGTAGACGGTAGGAGGGGTGTTGCTCAAAATCGAGTGCATTTTGGACAGATAGTAGTCCAGAGTTGATGTTAATGTGGAATGTCCCATTGGGGTCGCCTTGATTGATCCTGTACAGCACTGAGGACGGGCAACTGGCGGAGACAGATAGCACAGGGGAGCCAGGAGGTATGGCCTCACTTATCTCAGTGATGTATTCTTCAGAGGAGAACCTGGGTGGTGTGAATTCAGACAGCTTTACAGTGATGGTAACAGGGCAGAGGGCACTGCGCTGAGGAAAGCCCTGATCTGTGGCTTTTACTGTGAGGTGATAGCGCTCCTGCGGAAGTTTGTCTAATGCATCAAATACATGAATGCTTCCTGTCTCCTTGTCGATTTCAAAGGCACCATCCACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11750 True 5403 lncRNA 0.45 6 16241520 16254522

Neighbor

gene id symbol gene type direction distance location
CI01000000_16191231_16195841 GM2A coding downstream 45679 16190861 ~ 16195841 (-)
CI01000000_16188243_16189302 NA coding downstream 52218 16188159 ~ 16189302 (-)
CI01000000_16167132_16171442 CCDC69 coding downstream 70078 16167052 ~ 16171442 (-)
CI01000000_16085128_16085979 NA coding downstream 155460 16084573 ~ 16086060 (-)
CI01000000_16058344_16063500 GPR137BB coding downstream 177892 16057946 ~ 16063628 (-)
CI01000000_16302021_16337921 SLC36A1 coding upstream 46119 16300641 ~ 16337921 (-)
CI01000000_16354158_16360016 NA coding upstream 99437 16353959 ~ 16360213 (-)
CI01000000_16395230_16423976 GLRA1 coding upstream 139610 16394132 ~ 16423976 (-)
CI01000000_16583129_16583311 NA coding upstream 328592 16582968 ~ 16583471 (-)
CI01000000_16628234_16631045 THOC3 coding upstream 373175 16627697 ~ 16631814 (-)
G10764 NA non-coding downstream 29305 16211611 ~ 16212215 (-)
G10642 NA non-coding downstream 135803 16015389 ~ 16105717 (-)
G10723 NA non-coding downstream 140138 16096564 ~ 16101382 (-)
G10646 NA non-coding downstream 149474 16081559 ~ 16092046 (-)
G10674 NA non-coding downstream 233136 16007692 ~ 16008384 (-)
G10669 NA non-coding upstream 1997 16256519 ~ 16260121 (-)
G10825 NA non-coding upstream 220508 16475030 ~ 16475373 (-)
G10827 NA non-coding upstream 225857 16480379 ~ 16480815 (-)
G10850 NA non-coding upstream 254530 16509052 ~ 16509284 (-)
G10672 NA other downstream 10394 16226287 ~ 16231126 (-)
CI01000000_14200000_14436182 TENM2 other downstream 1742926 14200000 ~ 14436253 (-)
G9602 NA other downstream 1894986 14341002 ~ 14346534 (-)
G9036 NA other downstream 2514430 13726800 ~ 13727090 (-)
G8699 NA other downstream 2930091 13272585 ~ 13311429 (-)
G11107 NA other upstream 412596 16667118 ~ 16667947 (-)

Expression


Co-expression Network