dbf4 (LOC107666861,LOC107719134,LOC107592429,LOC107686229,LOC107714332,LOC107592324)


Basic Information

Item Value
gene id dbf4
gene name LOC107666861,LOC107719134,LOC107592429,LOC107686229,LOC107714332,LOC107592324
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20129043 ~ 20133941 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261109.1
TGACAGTGTAACGAAATCGCATTTTATGCTCTGAACAGTTTTTTCGCGTATATATTCTACGTAAAATTCGAGCTTTTTAAATCGATGTAACTTACGTTTAAATGTCAGCGATTTGCGGCGGCGTctttgaaatgtcaaaaaatatacGTCGAATCTCCCTTCACGAACTCCAAGGTTACAGCAGGTTTTGTGGGAGTGGAGAGAGTCTCGAGCGGGAAAATGGAAACGGGTTGCGTCGAGCGTTTGTTATGAAGATATTTACAAAACAGTGCAGGCGTTTAACGCAgtgttgtgtttttagtttAGTGTTTTAATCATAGAACACTTGTAACTAATGCTGCTATGTGTTAGCGGTATAACTAGCTGGTTTAGCCGGGTTTAGGCCTGTAACtgttaaaagtaataaaagctCCACGATGAAGCACGAATCTTTCTCCAGGTGTAAGGACAGAGATTCAAAATTGGACGGACATAATAGTGCAACATCTAAAGGCAAAATTAAACCCTCATGTGAGGCTCTTCAGAACAAACCTTTTAAAGGGAGAATATTTTACTTGGATCTGCCGTGGAATATGAAAACGCAACTCTTGGAAAATGACATCAAAACACTTGGTGGTACTGTGGAAAAGTTCTTCAGTAAGGACATCAAGTATCTTGTGTCCAATAAGCCAGAGGCTCGTTATGCCCAGCGTCTCCTGCCGGACTCTCCTGCTCCCAGTCCAGATTCAGGCGTCAGCTCTCCTCATCCCAGCAGCAGGAGGGAAAGTCATGGGCACAGGGGCAGTTCTCAGGGAGTCACGGATACGGCAGCTGTAAGTCGAGGCAAATCGCTTGTGGAGAAGGTCGTTAAAGAACAAGAACGTGTTCAGATGAATGGGATCTTGGCAAATGCTGTGGAATGGGGGGTCAAAGTCCTACATGTTGACGATGTTATTTCATATGTTGACAAGAAGAAATCAAAAATCATTACAATGAATGCAGCTAATCCAGTGGTGAAAGGAGCTGCCAGCATTCAGCAGACAGAGAAAAATCTGTATCACAGGCACAATGCTGGAAGAATTCGTCGACCATTTGTGAAAGTAGAAGACTCAAGCAGACATTATCGTCCCCTGTACCTTCCCCTGTCCAACATGCCTGTGTGCAACATCCGCTCTCTTCCACCCTGCAGTCCTTTCCTGATGGATGAACATGGGAAGGATGACACAAAGAAAAGACACAAAGAGCAAAGGTCTGGAGGGGATCGAGGAGCAcgaggaaagaaagagaagcgTAGAGGACATGAAGggagagaaaagaggaaagGAGGGTACTGTGAGTGCTGTGAAGTCAAATTCGATAACCTGAAGGCACACCTGGAGAGCAAGCAGCATCAGTCTTTCTCTAAGAGTGATAAATATGGAGTTGTGGATCAAATCACTGCAGGACTGACCTGTGACCTTAATAACATTGGCACGCATTGCAGAAGGGTGAAATGCAGTACCTCAACCCCTGTTCTTTGTGCTGGAGCCATGTTGCCAGTAAAGGAAGACGTGGGATCTGTGAATGGTGGTTGGAAACAGGAAAGCGAAGGGTGTTTGCTTAGGAGCTCGACAGCAAAGCTACCTCTCTCGGAACAGACCAGAGAAAAACCTCTGTCGGTTCGCAAACGCAGCAGGGGCCAGTGTGAGTTCCCTCAGAGCAACAGGGACTGCTTGTTCAATCACTCCGATGTACCGGAGAAGTCCCTTTCAAAGCGGGGATCCTTTGAGTGGGAATACCACTTGCGGAAATCTGAAGGTGCATCTTTTCTCAGCAGAGAGCAGAACTGTGACTCTAATACACTTGAATGCAGGACAGACCAACAAACCAGGACAAACCCTGACATGCACACAGCTCAACAGTTCAGTGAAAGAGACCGAGAATCGTTAACAGGAATTGAATTCTTAAGGACTAACTACTGTGAAGTTTATTCACAAAGTATACCAGAAAATCAAGTTGGAATCTCAGCTCTTTGGCCTTTAACCTGCACAGAACCCAAACCGGACCTCGAAAGCCCCACTAGTTTACTCCAGCGGAAGGTTCGAAATGTCAGATCCCGAAGAAGAAAGCAAGCGTCAGCCTTGCACATTGAATCATCGAACTCTTTTTCACCTGTTAAACCTGTACAGGAGTGGGAGAACCCACCTGCTTCTCTCCTGGACCTGAGGCAGCTCTTTCAGTCCAGTGACATGGATGAAGACTTTAAAGGTTTTTTAGATGAGTAAGAGGAATTAAACTGTAAACGTTACTCTgccaaataatatattaataaatctgcTGTTCATATGTAAAAGTGCATTCTCACCATACAGGCTTTAAACTTTTTAGATAGAAAATATACCTATTGACTTTAAACTGGGAAAAAATAAGTGGTTATGAACAGTATGTAAATTTATGGAGTGGAATGATATAACAGCAAGAGATTGTcttgaga

Function

NR:

description
PREDICTED: protein DBF4 homolog A-like

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K06629 ASK, DBF4; activator of S phase kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261109.1 True 2452 mRNA 0.44 12 20129043 20133941

Neighbor

gene id symbol gene type direction distance location
adam22 adam22,LOC107719137,LOC107714333,LOC107666740 coding downstream 1080 20076807 ~ 20127963 (-)
mrpl32 mrpl32,LOC107592435,LOC107666771,LOC107686307,LOC107714338,LOC107735708,LOC107580730 coding downstream 87682 20039947 ~ 20041361 (-)
ccdc127a ccdc127a,LOC107686768,LOC107719164,LOC107556965,LOC107592531 coding downstream 89856 20036348 ~ 20039187 (-)
rnf144b rnf144b,LOC107592436,LOC107686312,LOC107556966,LOC107714339 coding downstream 102038 20022244 ~ 20027005 (-)
sqlea sqlea,sqle,LOC107666801,LOC107556968,LOC107714342,LOC107686341,LOC107592438 coding downstream 108811 20011295 ~ 20020232 (-)
rundc3b rundc3b,LOC107666772,LOC107686653,LOC107719153 coding upstream 5471 20139412 ~ 20154648 (-)
polr3glb polr3gl,polr3glb,LOC107666760,LOC107714326,LOC107592290,LOC107686116 coding upstream 105191 20239132 ~ 20243565 (-)
si:ch211-135n15.2 LOC107719151,LOC107592495,LOC107666737,LOC107714311,LOC107686628,LOC107592633 coding upstream 126894 20260835 ~ 20264890 (-)
dpy19l1l dpy19l1l,LOC107666881,LOC107719125,LOC107592414,LOC107737812,LOC107686065,LOC107592262 coding upstream 171877 20305818 ~ 20313239 (-)
herpud2 herpud2,LOC107686057,LOC107600485,LOC107719122,LOC107592253,LOC107737813 coding upstream 245239 20379180 ~ 20385456 (-)
G114663 cldn12,LOC107682396,LOC107686255 non-coding downstream 24773 20101044 ~ 20104270 (-)
G114626 LOC107714343,LOC107666800,LOC107592439,LOC107719142 non-coding downstream 157086 19959867 ~ 19971957 (-)
G114611 NA non-coding downstream 409107 19719186 ~ 19719936 (-)
G114608 NA non-coding downstream 435650 19693138 ~ 19693393 (-)
G114607 NA non-coding downstream 445113 19683622 ~ 19683930 (-)
G114718 NA non-coding upstream 40222 20174163 ~ 20244153 (-)
G114741 NA non-coding upstream 82162 20216103 ~ 20217581 (-)
G114747 NA non-coding upstream 111080 20245021 ~ 20245239 (-)
G114768 NA non-coding upstream 169042 20302983 ~ 20305444 (-)
G114771 NA non-coding upstream 208136 20342077 ~ 20409610 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 471319 19596432 ~ 19657724 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other downstream 707949 19416962 ~ 19421094 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other downstream 1307933 18812238 ~ 18821110 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 1430636 18684573 ~ 18698407 (-)
LOC122360747 plekha8,LOC107684546,LOC107745377,LOC107743161,LOC107596648,LOC107550836 other downstream 1457769 18669607 ~ 18671274 (-)
G114715 NA other upstream 32854 20166795 ~ 20177758 (-)
G114793 NA other upstream 308024 20441965 ~ 20452450 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other upstream 502184 20636125 ~ 20650937 (-)
G114901 NA other upstream 518036 20651977 ~ 20653574 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 878666 21012607 ~ 21017105 (-)

Expression


Co-expression Network