mrpl51 (mrpl51,LOC107726236,LOC107713917,LOC107559052)


Basic Information

Item Value
gene id mrpl51
gene name mrpl51,LOC107726236,LOC107713917,LOC107559052
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5820991 ~ 5822850 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261179.1
TCTAATCTATTCATCAAAACTCATTACATCTGTACTGTCTGTGCGAAACTACAAGACTTTTCATTTGGAAAATACATTTACCATAATATGTataggacttttattttgaaaatggtcTAATGGCCGCCGCGGCAGTGTGTACACATGGAGATCGGTCTGACATCGCTGGCCTCATCTAGAAGATTTCAAAGATTTTAAAGCATATAACGCCCTTCTGTCGATTGAAATTACTTTCCCCGTTTTCGACGCGGGTTCTCCGAAGCATGTCTGTGTTCGGAGGAGCGCTGAGGAGCTTCTGTCAGTCCTCGGCTCGGCTCTTCAGCACAGGCACCTGCGCTAGAATACGAATGCACGCCATTCCCAAACTGAAGGAGGTGGATCGATGGACGGAGAAGAGGAGCATGTTTGGAGTCTATGACAACATCGGGATCTTGGGAGATTTTAAAGCTCATCCGAAAGACTTGATCCGAGGACCGGTGTGGCTCAGGGGCTTCAGAGGAATCGAGCTCCAGCGGCTCATCAGGAAGAAGAGGATGGTGGGAGACCGGATGATGACCGAGGACAAGCACAACCTGGACAAGAGGATCAGCTTCCTGTACCGCCGCTTCAACAGATACGGCAAACACAGATAGACTCGCCTTCGCTCGGCCAGAATTCAGTGTGTGTCAAAAGCTGCTGTCCCGttcattaaactgtaaaaatgttgtcatgATTGCAAAGATTGACCTCAGATGATGCTGATGAGTCccattaaaaagatttattaa

Function

symbol description
mrpl51 Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL51 (mitochondrial ribosomal protein L51).

NR:

description
39S ribosomal protein L51, mitochondrial-like

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005762 mitochondrial large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K17432 MRPL51; large subunit ribosomal protein L51

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261179.1 True 767 mRNA 0.47 4 5820991 5822850

Neighbor

gene id symbol gene type direction distance location
dctn3 dctn3,LOC107713912,LOC107559051,LOC107689179,LOC107726235,LOC107689028,LOC107569444 coding downstream 247191 5571501 ~ 5573800 (-)
ttk ttk,LOC107713924,LOC107726228 coding downstream 250209 5560481 ~ 5570782 (-)
bckdhb bckdhb,LOC107688983,LOC107689156,LOC107559046,LOC107569448 coding downstream 261095 5508617 ~ 5559896 (-)
tpbgb LOC107688980,LOC107725281,LOC107713928,LOC107713927,LOC107689178,LOC107559023 coding downstream 400351 5418473 ~ 5420640 (-)
rpa2 rpa2,LOC107713930 coding downstream 441029 5367332 ~ 5379962 (-)
arnt arnt,LOC107688995,LOC107689175,LOC107559034 coding upstream 11307 5834157 ~ 5850214 (-)
cers2b cers2b,LOC107688996,LOC107726244,LOC107689165,LOC107558627 coding upstream 30626 5853476 ~ 5873058 (-)
celf3b LOC107559029,LOC107713913,LOC107689166 coding upstream 54198 5877048 ~ 5900217 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding upstream 426069 6248919 ~ 6261997 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding upstream 440654 6263504 ~ 6279577 (-)
G110102 NA non-coding downstream 4118 5815560 ~ 5816873 (-)
G110100 LOC107713901,LOC107689161,LOC107559047,LOC107689017 non-coding downstream 7307 5809971 ~ 5813684 (-)
G110093 NA non-coding downstream 12642 5778754 ~ 5808349 (-)
G110090 NA non-coding downstream 43950 5774847 ~ 5777041 (-)
LOC122360242 elovl4a,LOC107726252,LOC107689158,LOC107689169,LOC107713923,LOC107688984,LOC107559048 non-coding downstream 239259 5575640 ~ 5581732 (-)
G110106 NA non-coding upstream 29582 5852432 ~ 5852762 (-)
G110206 NA non-coding upstream 174771 5997621 ~ 5999361 (-)
G110221 NA non-coding upstream 295935 6118785 ~ 6119767 (-)
G110224 NA non-coding upstream 314257 6137107 ~ 6207805 (-)
G110227 NA non-coding upstream 316544 6139394 ~ 6208668 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other downstream 2373 5817040 ~ 5818618 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other downstream 30457 5782667 ~ 5790534 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other downstream 575433 5232211 ~ 5245558 (-)
G109724 LOC107084717,LOC106511825 other downstream 1725487 4094757 ~ 4095504 (-)
G109600 NA other downstream 2691012 3113842 ~ 3129979 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other upstream 79727 5902577 ~ 6184133 (-)
G110208 adamts16,LOC107757336,LOC107558631,LOC107689003,LOC107726256,LOC107657842,LOC568792 other upstream 206358 6029208 ~ 6034777 (-)
G110215 NA other upstream 273825 6096675 ~ 6099927 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other upstream 456859 6279709 ~ 6339496 (-)
G110303 NA other upstream 1259112 7081962 ~ 7083524 (-)

Expression


Co-expression Network