ppp1r8b (ppp1r8b,ppp1r8,LOC107564517,LOC107689150,LOC107688979,LOC107713931)


Basic Information

Item Value
gene id ppp1r8b
gene name ppp1r8b,ppp1r8,LOC107564517,LOC107689150,LOC107688979,LOC107713931
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5355987 ~ 5360418 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261275.1
ctttttaatatttatgagccGGAAGACGATCCGGTTTGAGTAGATTACCCAAGATGCTCGGCGTGCTTGTAGCAGGGGGGAATGCGTGACAATGGCAACAAATACTACAGCAAATAACCCATCTTTCGATTGTCCATcatgGGCAGGGAAGCCTCCAGCGGGACTGCATTTGGACGTGGTGAAAGGAGACAAGCTAGTCGAGAAACTGATCATCGATGAGAAGAAGTATTACTTGTTCGGGAGGAACCCGGACGTCTGTGACTTCACCATCGATCATCAGTCGTGCTCTCGGGTGCACGCGGCCCTCGTCTACCACAGGCATCTGAAAAGAGTGTTTCTCATCGACCTCAACAGCACACATGGCACGTTCCTCGGACACATTCGCCTGGAGCCCCACAAGCCCCAGCAGGTTCCCATCGACTCCACCATGTCGTTCGGCGCTTCCACGCGCGTTTACACCATTCGGGAGAAACCTCAGAGTCAGCCGGGCTCCGGCGTAGGGGACAGTAAAACCGGGGACGAAGAGGAGCTGAAGGGTCTTCTGGGACTTCCAGAGGAAGAAACTGAGCTGGAGAACCTGACTGAGTTCAACACCGCTCATAACAAGCGCATCTCCACCCTCACCATAGAGGAGGGCAACCTGGATATTCAGAGACccaagagaaaaaggaagagctCCAGAGTGACCTTCAATGAAGACGATGAGATCATTAACCCAGAGGACATCGACCCCTCTGTCGGACGTTTCAGAAACATGGTCACAACAGCCGTGGTTCCCATTAAGaagaagaaaatggGCGGAGGCAACGCGCTGGGAATCGAGGAAACCATGACGCGACACATGCACACGTTCCCTTTGCAAGGTGGACTCTACAGAGACCTCCCCCCGGCCAGTCACGAAGCTCAGTCCCCGGGAGCTCCCGGCGGAGCCACCATCCTGGGAGGACTGCCGCTGCCGCTGCCCAACCCGGCCCCGGACGTAGACCTGGCCCAGGAGGCCCCGCCGCCTCCGCTCGTGCTCAACCCCACGCCGCTACCCGGCCCCTACGCCGCCGACCCGCTCAGTGAACCCCGCAAGAAGAAGTACGCTAAAGAGGCGTGGCCCGGCAAGAAGCCCACGCCGTCTCTGCTCATCTAGCCGCGTGTCGACACGCCACTCTCCTACGCTCACGAACTCTGTCTTGAAGCGTCTGGCAAACGGACTTGATCTCTCTCTACAAGAATCCGATTCGATGCgagaaattagttttaaaagatGACCTCGGCTCGCTCTCGTGTCACTCCAGGCGTGTAGTACTTACAGAACGCTACTTCCTCAAACGGATTCAATTGGTCCCAATcgttcgtttttgttttgtgctgctTGCACGTGATGCGCCGTTTCGTAGGAACCTTGCAATGACGTGAGGGTGAGCGAACGATTCAACGCGCTTCGAACGATTTGAAATGCCAGCTTGAAAGTGAGAGcctgatgaaaaacaaacacaagtgcATAACCAGATCCAGCAGAATATCACGTTTAGCCCAAGATGGCGGGGAGGAGGGGTTAACTTCTAcagtgtttttatgtaaaatgttctCGAAAACGTACCACTAGGCAGCAAGTTGTTTCAAACTAGCTGTTTGGCCACGCTTTTAGGAGCATCGTCAATCCAGATGATCACTTCGGTTTCAAAACCAAGGAAATTCTTCAATATCGTAACGCTTTACCGTGTGAagatctgtttttttctctctgtggtTTCACACTCTATTAGTTTCATACCCGTTCCCCTTTAATCCACGAAGCGAGGGCAGAGGTGTTCGCAGTGAACTGTTCGCTGACGGTTCATCAGGGCTCAATGTATACGGTCTtcactgttaaagaaaaaactgttttctaCTCCTGTTCTGTTTGGTACATTTGATGTTTGTACATATCATTCACAATAAAAGccagtgtatttttatatatttaaactgatGCCGGTTTAAGTCTTTACCTTTTGAATAGAGGTTCCTGTTTCGTATTCGTGACCGAGCTGTTCATTTTCTCCACAACTGGTTTGATGTCAAGATGTCAGCAGTCATGTGACTTGGGGTTTTTTGGTTCAACACCATGACGCTGATTATCAGAAGTCGTCCGTTCTGGCCTTTCATTGCTACAGCATGCCTTCACAAAAAGTCACCTTCCTGAGATACGCCGCCGCAAGCGGAAAAAGCGGTTTGGGATACCCGTGATGAATTACCTTTAACAGTTAAACTCGACTGTGACCGTGTCAACGAAGAAAACCTTTCCCGTGTCACTTCCTGTTAATCAGCACGCTCTATTTCTGGATACTGATGTCAAACCTGCGTTCGGTGGCTTTGGTTTGTCTGACTAGACGTGTTTTCCCgaaataaaatgcttatttttttgtc

Function

symbol description
ppp1r8b Predicted to enable mRNA binding activity and protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in negative regulation of protein dephosphorylation. Predicted to be active in nuclear speck. Orthologous to human PPP1R8 (protein phosphatase 1 regulatory subunit 8).
ppp1r8 Predicted to enable mRNA binding activity and protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in negative regulation of protein dephosphorylation. Predicted to act upstream of or within cell population proliferation. Located in nuclear speck.

NR:

description
PREDICTED: nuclear inhibitor of protein phosphatase 1

GO: NA

KEGG:

id description
K13216 PPP1R8, NIPP1; nuclear inhibitor of protein phosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261275.1 True 2400 mRNA 0.50 7 5355987 5360418

Neighbor

gene id symbol gene type direction distance location
rrp15 rrp15,LOC107598955,LOC107737032,LOC107703929,LOC107689025 coding downstream 179175 5173650 ~ 5176812 (-)
tgfb2 tgfb2,LOC107598937,LOC106584161 coding downstream 185357 5138694 ~ 5170630 (-)
lyplal1 lyplal1,LOC797125 coding downstream 260392 5090511 ~ 5095595 (-)
adcy3a adcy3,adcy3a,LOC107688975,LOC107703925 coding downstream 309104 5027170 ~ 5046883 (-)
wdr26a LOC107598934,LOC107756916,LOC107562420,LOC107688974,LOC107732721,LOC108270098 coding downstream 330663 5012577 ~ 5025324 (-)
rpa2 rpa2,LOC107713930 coding upstream 6914 5367332 ~ 5379962 (-)
tpbgb LOC107688980,LOC107725281,LOC107713928,LOC107713927,LOC107689178,LOC107559023 coding upstream 58055 5418473 ~ 5420640 (-)
bckdhb bckdhb,LOC107688983,LOC107689156,LOC107559046,LOC107569448 coding upstream 148199 5508617 ~ 5559896 (-)
ttk ttk,LOC107713924,LOC107726228 coding upstream 200063 5560481 ~ 5570782 (-)
dctn3 dctn3,LOC107713912,LOC107559051,LOC107689179,LOC107726235,LOC107689028,LOC107569444 coding upstream 211083 5571501 ~ 5573800 (-)
G109942 cyp4t8,LOC107559042,LOC107703932 non-coding downstream 8428 5346405 ~ 5347559 (-)
G109914 NA non-coding downstream 34691 5247238 ~ 5321296 (-)
LOC122359853 NA non-coding downstream 148568 5198791 ~ 5207419 (-)
G109907 NA non-coding downstream 164637 5190781 ~ 5191350 (-)
G109906 NA non-coding downstream 165282 5190350 ~ 5190705 (-)
G109953 NA non-coding upstream 35712 5396130 ~ 5396354 (-)
G109956 NA non-coding upstream 36879 5397297 ~ 5397517 (-)
G109944 NA non-coding upstream 75414 5435832 ~ 5437067 (-)
LOC122360242 elovl4a,LOC107726252,LOC107689158,LOC107689169,LOC107713923,LOC107688984,LOC107559048 non-coding upstream 215222 5575640 ~ 5581732 (-)
G110090 NA non-coding upstream 414429 5774847 ~ 5777041 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other downstream 110429 5232211 ~ 5245558 (-)
G109724 LOC107084717,LOC106511825 other downstream 1260483 4094757 ~ 4095504 (-)
G109600 NA other downstream 2226008 3113842 ~ 3129979 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other downstream 3391826 1741120 ~ 1964161 (-)
G109287 NA other downstream 4473235 882459 ~ 882752 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 422249 5782667 ~ 5790534 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other upstream 456622 5817040 ~ 5818618 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other upstream 542159 5902577 ~ 6184133 (-)
G110208 adamts16,LOC107757336,LOC107558631,LOC107689003,LOC107726256,LOC107657842,LOC568792 other upstream 668790 6029208 ~ 6034777 (-)
G110215 NA other upstream 736257 6096675 ~ 6099927 (-)

Expression


Co-expression Network