zyx (zyx,LOC107748852,LOC107569995,LOC107699937,LOC107596670)


Basic Information

Item Value
gene id zyx
gene name zyx,LOC107748852,LOC107569995,LOC107699937,LOC107596670
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8664566 ~ 8680965 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261280.1
CCGAGCgtctttgtaaatgtttaaactggATTCAGGAAAGGAAGTTTAGTCATTATAGACGAGCGTCGTCATGGGACCGATTGTTCATATTCAGTATGTCATAGCTGACATTATCTTTCGAAACGGACTGTAAGTTGTTGTGTCATACAGTGTGATCAAGATGGCTGACTCTAGCACTGGCAAGCCTGTTGTGGTCACTTCCTCCGTCTCCCTCAAAATGACCGCTCCTTCTTTCTACAACCAACCCAAAAAGTTTGCGTCTGTCGCTCCACCACGCCCCAAAGGACAGATGGGCCCATCACATCCCTCATCATTTATAAGCACTGGTGTTATTGGACGGGTTGGAGAGATGCCCCCGCCCTCTCTTTGTGAGGACTTCCCGCCcccacctcctcctccactgGACGATGCAGAGCTTCCAGCCCCTCCTCCAGAATGCCAAACCACACCCCCTGCATCTGATGCCCCTCCTCCTGCTTTCCCAGCCCCGCCCCCTGTTGCAGAAGACCTGAACCTCCCTGCACCTCCCGAGGAATTAACCCCTGCACCTTCGCCTCCTCCCccccccccaccaccaccaccaccaccacctcctcctctcccCGAGACCGGTGCAGGTGCCAACTCTCAGAGGGTGTTTGAGAAACAGACCAGTTTTGACAGGCAGTTGGGCTCTTTGACCGATATGTTATCAGAAATGGAGACGAGCGGACCTTTCAATCCAAAGTTGCCTAGCCAGATTTCATCAGCATCAGCGGCAAAACCTGCAGCGCCACCGCCGACCGCTCCTAAACCTGCCCTTTCCTTTCTGCCCCCTCCTGAGCTGCAGGATCGTCCTCCCCCTGCTCCTTGGGCTGAGGAGCTACGTGCCCGAACACGACCGGCCAATCAGAACGTAATATCTGCCCCCGCACCTGCGCAGTCATTTCCTAAGGCCCCAGCTGTGGCTCCAAAGACCAACTTCCCTCCGAGTCAGCTGAATTCAAATTTTGGATCCAAAACAGTTAGTCCTGCACCTACCGGAGGAGCAAGAGTGTTTAACCACGCCGTTAAAACCCCCGCCCAAAGCTCTTTCCCGCCGCCTCCACCTGCCGCCCCCCCTGCCCCTGTTCCTCCACCAGCAAACATTCCCGCCCCTGCACCTACGTTCAATCACTCTGAAACAGCTCCCATTGGCAGTCAGCAAAGCTTTGCTCCGCCTTCTCCTGCTGCACCCAAGACATCGCCAGTCTCGTCATTCAACAGACCAGCAGGAAACGCTGTTCCACCAAAGgtgtCTGGTTCAGGTTCAGGTCCTGGTGGAGCTCCTCTCACTATGAGGGAAGTAGAAGAGCTGGAGAAAATGACTAAGGACTTTATCAAAGACATGGACAAACATCCTCCTGTGATCACCTCTTCAGCTACAGagGTGTGTGGTAAATGTGGAGAGTCTCTGTCTAGATCTCAGCCAGCAGTAAGAGCGATGGACAAACTCTTCCACTCCCATTGTTTCTGCTGCATGACCTGTCGGCGCCCCCTACAGGGCATGCAGTTCTACGACCGTGACGGAACTCCTCAGTGTGAGGACTGCTACATGAACTCTCTGGCTGTGTGTTCTCGCTGTGGGGAGCGGATCACAGATCGTGTCCTGAAGGCGGTGGGCCAGTGTTTCCATGCCCAATGTTTCCTCTGCACTACCTGTGGCTGTACCCTGGAGGGCGCTCCATTCATCACCGATGACAATAACAACCCCTACTGTGTCAAAGATTACCATCGCCGTTTCTCTCCTCTCTGCGTAAGCTGCAATGAGCCGATCGTTCCCGACCCTGGAAGTGAAGAAACGGTCAGGGTTGTTGCCTTAGAGAAGAACTTTCACCTGAAGTGCTACCGCTGTGAGGATTGTTCTCGTCCCCTTTCCATAGAGGCAGATGCCGATGGCTGTTATCCACTGGATGGCAGAATTCTGTGCATGAAGTGCCATACCCAACGCGCGAAGCAGGCCAAACACTGATTGGTGGAACTCGCCACGACCCTaaaccaaatttaaaaacacataattgGCTCAGCGTTTGAAATGTACTTGCCgtatgtgtttgtgagtgtttcTTCTCTCTTCCGTTTCACATTCTCATTTGTCTCACGTTTGCTCGATGACAGTTTCGCCTTTTCTCGACAAAGCTCTGCTGCTTTTTCTGAATGGCCTCATTCAGAGCTAGGTCAATAGCTTGCCCTCTTTGCCCTGGCTGTTTTCTGATGGGGCTTGATATGTGCGAGCGCAATGTTAGTGCCTCTATGTTGAATGTTATATGCGACACAGTTTTTACCCCTAGATTGATATGTAAAGTGTTAGAGAAGTGATTTTTAGGGCTGTTTTTTGGCTTGAATTTTTACTGTAGTGGCTGACTCGGTGCAGAGGTAATGTACTGCACTGCCGTCTCAGTTTAGCGAGCTGTACGACTCCCAGCATGCCTTTATAAAAACTCAGAACATCCATAAATTGTACCACAGCTACCGAGGCGAGAGGTAACGTCAGTATATCCACAACCACCCATGCACTTTCGATAAGGCTTTCCGAAACATACCTTGTAGTTGATGAGAAGGGCTCTGTGTAGTCGCGACAAAcgtaaaataagcaaaaacaaaggcagGGAAAGGCGAAAGAACAACGCAACTTATGTATTTGTCATGCATGCTTCGTTTATAGAACTGTTTACTTgtaaatgaacatattttaaaaagcacatttgtttTGTCCTCAAACGTATCAAATATGTGATGATACAGTAAAGTAAGTTTGCATTGCTTATCATAGCCGGTGTCAGTTCAGTTGGTTTTCATTCCACATATTGCTAGAGGTATTTAGCGATTGCACAGTTGTAGGTGGATTtgaccatttaaaatgtatttccaaaGAAAAGCACATGAGTCACTGAGACTAATAAGACTATCACATTGTAGCTAAAAACATCTGGATTATTATAGATGCACAAAAGTTTCTGAATATACTTAGAGACTTttggttatttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaaaattcgTTCATCACAAAACTGTACAGTCCATTTTATGACTTTCTCTTAAAAACAACAGTGTTTCTGTAGACTAACGCGTTTCCGaacaaattgaaatgttttctttttaccaGTCAGCACTCCCGTTGATTCCAGGTTTCcgacattttgcattttagattttagtttcGTGTTTTGTTGCGTTTTTCGCAACAACCACCGTCTCGCTAACACCACTTACTTTGGCTTTAAGGTAGCACTGATATTATTTTGAGACTTGCATTCAGTAGCTCAGAAACGTTTTATTTACCGTTGCATctcagtgtgtgttttcattcctGGCATCGTCTCTTGACTAACAAAGATATTCTCGTATTTGATTTAATCGAATAAAACGATGGCTCCCATCATAATAAGTTACTTGACCAAATCCAAACATTATGCatgattgttattgttattacagtgtttttatgcattgtTGCACGGTTGCCTCATTTTCATGCTGGTATCACAATACTGCTGAATTCAGCAAGCTGTTATTGACCATTTGAACACTTGTGGTTAGCCTCCATGTATTTACCATTTACCAGTACttcgtctttctctctctctctctctctctttgaaaaCTGAACATCTAAATTCCTCTCTTaatatgtgaatgtgtgtatgtttacgGTCAAACGTATGCCAACCTATTATTTTTGCTACCATTGTTTTCCTTCCACATTTGTACTGTATTCTGAACTAATAAAAGTATCAAATTGA

Function

symbol description
zyx Predicted to enable metal ion binding activity. Predicted to be involved in integrin-mediated signaling pathway and transforming growth factor beta receptor signaling pathway. Predicted to be active in cytoplasm; focal adhesion; and stress fiber. Orthologous to human ZYX (zyxin).

NR:

description
zyxin-like

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K06273 ZYX; zyxin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261280.1 True 3845 mRNA 0.46 11 8664566 8680965

Neighbor

gene id symbol gene type direction distance location
kel LOC107569991,LOC107744677,LOC107699936 coding downstream 391 8653833 ~ 8664175 (-)
emg1 emg1,LOC107748869,LOC107748863,LOC107699927,LOC107744679 coding downstream 11003 8651956 ~ 8653563 (-)
nop2 nop2,LOC107685519,LOC107699935,LOC107749104,LOC104957145 coding downstream 14835 8643158 ~ 8649731 (-)
LOC122361375 NA coding downstream 17011 8647414 ~ 8647555 (-)
gapdh gapdh,LOC107596669 coding downstream 34388 8625617 ~ 8630178 (-)
clcn1b clcn1b,clcn1,LOC107744675,LOC107596673,LOC107699941,LOC107569998,LOC107748802,LOC107685513 coding upstream 50732 8731697 ~ 8758899 (-)
casp2 casp2,LOC107748817,LOC107744674 coding upstream 78162 8759127 ~ 8767209 (-)
m6pr LOC107685512,LOC107748841,LOC107596675,LOC107744715,LOC107699943 coding upstream 93630 8774595 ~ 8780023 (-)
ccdc106a ccdc106a,LOC107596676,LOC107748769,LOC107685509,LOC107569999,LOC107699945,LOC107744702 coding upstream 115792 8796757 ~ 8805113 (-)
si:dkey-17m8.1 LOC107748717,LOC107564863,LOC107684161,LOC107656699,LOC107596738 coding upstream 140700 8821665 ~ 8833880 (-)
G110773 NA non-coding downstream 73932 8589898 ~ 8590634 (-)
G110753 NA non-coding downstream 113014 8547782 ~ 8551552 (-)
G110548 NA non-coding downstream 425390 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 428773 8234908 ~ 8235793 (-)
LOC122360778 NA non-coding downstream 671699 7988950 ~ 7992867 (-)
G110807 NA non-coding upstream 164560 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 319822 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 323573 9004538 ~ 9005206 (-)
G110849 NA non-coding upstream 326332 9007297 ~ 9007532 (-)
G110852 NA non-coding upstream 350170 9031135 ~ 9031449 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 28344 8633350 ~ 8636222 (-)
G110556 NA other downstream 347881 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 362321 8298789 ~ 8302245 (-)
G110544 NA other downstream 447971 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 572111 8082900 ~ 8092455 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 464965 9145930 ~ 9152183 (-)
G110974 NA other upstream 590006 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1196246 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 2064611 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 2176555 10857520 ~ 10883424 (-)

Expression


Co-expression Network