epn1a (epn1,LOC107672968,LOC107598387,LOC107724817,LOC107744298)


Basic Information

Item Value
gene id epn1a
gene name epn1,LOC107672968,LOC107598387,LOC107724817,LOC107744298
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13506631 ~ 13516502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261304.1
GCGGGGAAACGGAAGCGGAAGTGCCGCCATCTCCTCGTACCATCCGAGCAACAGCAGGGTCAGTACAGGCGTTGTTTGCCAAAGTAGCGCTATTATATCAGCGAAAGCGGCTGCATGACACGTTATATGTTTAAACGACGAGCACGGCTCGAAGGGCGACAGTCGTGAGGGAAAACCGCGGTGGCGTCAGTCTGTCACGCACTCAGGCGCGTCTCTTTATGAGTTGAGTTAGCATAGCGCGGCGCTCGCGTCTCTAAAtgagtgtttttaatttagcgCCGTGACAGAGGCAACAGCGCGTCCCTTTACCCCCGTCTCCACCGATAACAGCCCACTTTCTGCAGCTCGGCTGGATGTCTGGTCGTGTTTGAGAGGAAGAACAGAAGCCCCGCGTTATTTCACCCAACATCTGTGCTTCTGGGCCCTCATGTGGCCGCTGTGCGGATGTTTTGAACAGTGGACAGGCTAAACACTAAGAGACCCCGACCtgagcgcgcgcacacacagagagagatcgAGAGGGGGGGAGAGAGACCGACACTCCCAGATTTTGCAGAACCTGATAGCCAGCCTGTTGCCATGTCGACATCATCGCTGCGGCGACAAGTGAAGAACATTGTTCACAATTACTCAGAGGCAGAGATAAAGGTTAGGGAAGCAACCTCTAATGACCCATGGGGTCCCTCTAGCTCTCTGATGTCAGAGATTGCTGACCTGACATACAATGTAGTGGCCTTCTCAGAGATTATGAGCATGGTCTGGAAGAGACTCAACGACCACGGGAAGAACTGGAGACATGTATATAAAGCTATGACTCTGATGGAGTATCTGATAAAGACGGGTTCAGAGAGAGTGGCACAGCAATGCAGGGAAAACATTTACGCCGTTCAGACTCTCAAAGATTTCCAGTATATTGACAGAGACGGCAAGGACCAGGGTGTGAATGTACGGGAAAAGGCCAAACAGTTGGTGACTTTGCTAAAAGATGAGGAGAGGCTACGAGAGGAGAGGATTCATGCACTCAAGACCAAAGAGAAGATGGCACAGACTAGCAGTGCATCTTCGGCCCCTTCTGCTCCTGCTTTAGGGGGAGGACTGCACTCGGGAGCAGATGCTGAGCAGGCGTGGCCCCAGAGCTCTGGAGAGGAGGACCTGCAGCTCCAGTTGGCACTGGCCATGAGCAAGGAAGAGGCGGAGCAGACTAGCAATGACCCTCTGGAAGATGCAGAGCTCCGCTACGCACTCTCAATCAGCCAGGAGACCCACCAAAAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAGCCAAGCCCGAGGAGTCATCTCTGATGGAGTTGAGTGCTGTAGATCCATGGGGGGCCCCTGCGACGGGGTCCGCTGGACCATCTCCGCCTCCTGCGTTGGCTCCTGCATCTACCGCTGGACCGTGGGGCCCTGCCGACCCGTGGGGAGCCGCTTCCCCCGCCTCACCCCCGAGTGCCGACCCTTGGGGGGGAGCACCAGCAACAGTAGCCCCGGATCCATGGGGTGAATCGTCCTCTAGAGTGAACTCCGACCCCTGGGCGTCCACAGCTGTGACCCCTCCAAGTGCCGACCCTTGGGCTGCCTCAGTGGCTCCGGCCCCTACCCCGCTCTCAGGGTCAACCGATCCCTGGGCAGCGGAAGGAGCCGTCCCTGCCACTGATggtctgacctctgacccctggaGTGGCTCAGTAAAACAAACTAACGGCACAGCAGATCCAGAAAGAAGAGGCTCCTCGGTGACGGGAGGTGATGCTGGAGGTGGAGGCAGCACAGGCTCCCCAGTGCCCTTTGACCTTTCATCGCTCAGTTCCTCCTTGCCTGTTCGAAAAACGCCAGAGTCGTTTTTGGGTCCCAATGCTGCACTCGTGGATTTGGACTCACTAGTATCATCAAAACCCAAACCTAAACAACCACCGCCACCAAGCATCTCCTCCACATCTCACAACCCCTTCCTACAGACACAggGCCCCTCGTCAACAGGTATGGGAGTTACTCCAGGCAGTGCCATTTCCAGTAGAGGGGTGTCTCCGACCCCACCATCTGCTTCTAATCCTTTCGGCGCTACCCCGATGGCATCCATCTCCCCTCAACCTTCTTCGCTCGGTCTGAGCCAGCTCCGTACAAGCCCCATTCCCCAGAATCCTATGCTGGGTCACATGCCACCACCAGCAGTGGGAATGGTTCAGCCGGGGATGGGCATGCCAGGAATGGGGGTCCCTATGGCGGCCCCTGGTATGGGCATGGGAATGGTACAGTCCAGCCCAATGGGCATGCCTTTTGGTGGAATATCCCCCATGGGTCCCGCAGGAAATCCATTGCTGATGGGCCCTGGTGGCCCTGCGCAGCCTGCACTGATTTTGGGCGGGCCGTCGGGCGTGGGTGGAGTGATGGGAACAGGAGGATCTATGGGAGGTGGAACAACAGGCACAAGCACCAATCCTTTCCTCCTTTGAGAGATTTCACCAATCCCACGTGCCCTGTCCACTAAATCCAACCAATCCAAACCTGCCCTACCAACACAAACAGTTTGtgtttgacaaaaaaagaaatgtgtgtaCATCtctatatttaatgaaaaagtaaaaacaaaaatgtgttattttctttcacaaaa
>XM_043261305.1
TGCGGGGAAACGGAAGCGGAAGTGCCGCCATCTCCTCGTACCATCCGAGCAACAGCAGGGTCAGTACAGGCGTTGTTTGCCAAAGTAGCGCTATTATATCAGCGAAAGCGGCTGCATGACACGTTATATGTTTAAACGACGAGCACGGCTCGAAGGGCGACAGTCGTGAGGGAAAACCGCGGTGGCGTCAGTCTGTCACGCACTCAGGCGCGTCTCTTTATGAGTTGAGTTAGCATAGCGCGGCGCTCGCGTCTCTAAAtgagtgtttttaatttagcgCCGTGACAGAGGCAACAGCGCGTCCCTTTACCCCCGTCTCCACCGATAACAGCCCACTTTCTGCAGCTCGGCTGGATGTCTGGTCGTGTTTGAGAGGAAGAACAGAAGCCCCGCGTTATTTCACCCAACATCTGTGCTTCTGGGCCCTCATGTGGCCGCTGTGCGGATGTTTTGAACAGTGGACAGGCTAAACACTAAGAGACCCCGACCtgagcgcgcgcacacacagagagagatcgAGAGGGGGGGAGAGAGACCGACACTCCCAGATTTTGCAGAACCTGATAGCCAGCCTGTTGCCATGTCGACATCATCGCTGCGGCGACAAGTGAAGAACATTGTTCACAATTACTCAGAGGCAGAGATAAAGGTTAGGGAAGCAACCTCTAATGACCCATGGGGTCCCTCTAGCTCTCTGATGTCAGAGATTGCTGACCTGACATACAATGTAGTGGCCTTCTCAGAGATTATGAGCATGGTCTGGAAGAGACTCAACGACCACGGGAAGAACTGGAGACATGTATATAAAGCTATGACTCTGATGGAGTATCTGATAAAGACGGGTTCAGAGAGAGTGGCACAGCAATGCAGGGAAAACATTTACGCCGTTCAGACTCTCAAAGATTTCCAGTATATTGACAGAGACGGCAAGGACCAGGGTGTGAATGTACGGGAAAAGGCCAAACAGTTGGTGACTTTGCTAAAAGATGAGGAGAGGCTACGAGAGGAGAGGATTCATGCACTCAAGACCAAAGAGAAGATGGCACAGACTAGCAGTGCATCTTCGGCCCCTTCTGCTCCTGCTTTAGGGGGAGGACTGCACTCGGGAGCAGATGCTGAGCAGGCGTGGCCCCAGAGCTCTGGAGAGGAGGACCTGCAGCTCCAGTTGGCACTGGCCATGAGCAAGGAAGAGGCGGAGCAGACTAGCAATGACCCTCTGGAAGATGCAGAGCTCCGCTACGCACTCTCAATCAGCCAGGAGACCCACCAAAAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAGCCAAGCCCGAGGAGTCATCTCTGATGGAGTTGAGTGCTGTAGATCCATGGGGGGCCCCTGCGACGGGGTCCGCTGGACCATCTCCGCCTCCTGCGTTGGCTCCTGCATCTACCGCTGGACCGTGGGGCCCTGCCGACCCGTGGGGAGCCGCTTCCCCCGCCTCACCCCCGAGTGCCGACCCTTGGGGGGGAGCACCAGCAACAGTAGCCCCGGATCCATGGGGTGAATCGTCCTCTAGAGTGAACTCCGACCCCTGGGCGTCCACAGCTGTGACCCCTCCAAGTGCCGACCCTTGGGCTGCCTCAGTGGCTCCGGCCCCTACCCCGCTCTCAGGGTCAACCGATCCCTGGGCAGCGGAAGGAGCCGTCCCTGCCACTGATggtctgacctctgacccctggaGTGGCTCAGTAAAACAAACTAACGGCACAGATCCAGAAAGAAGAGGCTCCTCGGTGACGGGAGGTGATGCTGGAGGTGGAGGCAGCACAGGCTCCCCAGTGCCCTTTGACCTTTCATCGCTCAGTTCCTCCTTGCCTGTTCGAAAAACGCCAGAGTCGTTTTTGGGTCCCAATGCTGCACTCGTGGATTTGGACTCACTAGTATCATCAAAACCCAAACCTAAACAACCACCGCCACCAAGCATCTCCTCCACATCTCACAACCCCTTCCTACAGACACAggGCCCCTCGTCAACAGGTATGGGAGTTACTCCAGGCAGTGCCATTTCCAGTAGAGGGGTGTCTCCGACCCCACCATCTGCTTCTAATCCTTTCGGCGCTACCCCGATGGCATCCATCTCCCCTCAACCTTCTTCGCTCGGTCTGAGCCAGCTCCGTACAAGCCCCATTCCCCAGAATCCTATGCTGGGTCACATGCCACCACCAGCAGTGGGAATGGTTCAGCCGGGGATGGGCATGCCAGGAATGGGGGTCCCTATGGCGGCCCCTGGTATGGGCATGGGAATGGTACAGTCCAGCCCAATGGGCATGCCTTTTGGTGGAATATCCCCCATGGGTCCCGCAGGAAATCCATTGCTGATGGGCCCTGGTGGCCCTGCGCAGCCTGCACTGATTTTGGGCGGGCCGTCGGGCGTGGGTGGAGTGATGGGAACAGGAGGATCTATGGGAGGTGGAACAACAGGCACAAGCACCAATCCTTTCCTCCTTTGAGAGATTTCACCAATCCCACGTGCCCTGTCCACTAAATCCAACCAATCCAAACCTGCCCTACCAACACAAACAGTTTGtgtttgacaaaaaaagaaatgtgtgtaCATCtctatatttaatgaaaaagtaaaaacaaaaatgtgttattttctttcacaaaa
>XM_043261306.1
GCGGGGAAACGGAAGCGGAAGTGCCGCCATCTCCTCGTACCATCCGAGCAACAGCAGGGTCAGTACAGGCGTTGTTTGCCAAAGTAGCGCTATTATATCAGCGAAAGCGGCTGCATGACACGTTATATGTTTAAACGACGAGCACGGCTCGAAGGGCGACAGTCGTGAGGGAAAACCGCGGTGGCGTCAGTCTGTCACGCACTCAGGCGCGTCTCTTTATGAGTTGAGTTAGCATAGCGCGGCGCTCGCGTCTCTAAAtgagtgtttttaatttagcgCCGTGACAGAGGCAACAGCGCGTCCCTTTACCCCCGTCTCCACCGATAACAGCCCACTTTCTGCAGCTCGGCTGGATGTCTGGTCGTGTTTGAGAGGAAGAACAGAAGCCCCGCGTTATTTCACCCAACATCTGTGCTTCTGGGCCCTCATGTGGCCGCTGTGCGGATGTTTTGAACAGTGGACAGGCTAAACACTAAGAGACCCCGACCtgagcgcgcgcacacacagagagagatcgAGAGGGGGGGAGAGAGACCGACACTCCCAGATTTTGCAGAACCTGATAGCCAGCCTGTTGCCATGTCGACATCATCGCTGCGGCGACAAGTGAAGAACATTGTTCACAATTACTCAGAGGCAGAGATAAAGGTTAGGGAAGCAACCTCTAATGACCCATGGGGTCCCTCTAGCTCTCTGATGTCAGAGATTGCTGACCTGACATACAATGTAGTGGCCTTCTCAGAGATTATGAGCATGGTCTGGAAGAGACTCAACGACCACGGGAAGAACTGGAGACATGTATATAAAGCTATGACTCTGATGGAGTATCTGATAAAGACGGGTTCAGAGAGAGTGGCACAGCAATGCAGGGAAAACATTTACGCCGTTCAGACTCTCAAAGATTTCCAGTATATTGACAGAGACGGCAAGGACCAGGGTGTGAATGTACGGGAAAAGGCCAAACAGTTGGTGACTTTGCTAAAAGATGAGGAGAGGCTACGAGAGGAGAGGATTCATGCACTCAAGACCAAAGAGAAGATGGCACAGACTAGCAGTGCATCTTCGGCCCCTTCTGCTCCTGCTTTAGGGGGAGGACTGCACTCGGGAGCAGATGCTGAGCAGGCGTGGCCCCAGAGCTCTGGAGAGGAGGACCTGCAGCTCCAGTTGGCACTGGCCATGAGCAAGGAAGAGGCGGAGCAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAGCCAAGCCCGAGGAGTCATCTCTGATGGAGTTGAGTGCTGTAGATCCATGGGGGGCCCCTGCGACGGGGTCCGCTGGACCATCTCCGCCTCCTGCGTTGGCTCCTGCATCTACCGCTGGACCGTGGGGCCCTGCCGACCCGTGGGGAGCCGCTTCCCCCGCCTCACCCCCGAGTGCCGACCCTTGGGGGGGAGCACCAGCAACAGTAGCCCCGGATCCATGGGGTGAATCGTCCTCTAGAGTGAACTCCGACCCCTGGGCGTCCACAGCTGTGACCCCTCCAAGTGCCGACCCTTGGGCTGCCTCAGTGGCTCCGGCCCCTACCCCGCTCTCAGGGTCAACCGATCCCTGGGCAGCGGAAGGAGCCGTCCCTGCCACTGATggtctgacctctgacccctggaGTGGCTCAGTAAAACAAACTAACGGCACAGCAGATCCAGAAAGAAGAGGCTCCTCGGTGACGGGAGGTGATGCTGGAGGTGGAGGCAGCACAGGCTCCCCAGTGCCCTTTGACCTTTCATCGCTCAGTTCCTCCTTGCCTGTTCGAAAAACGCCAGAGTCGTTTTTGGGTCCCAATGCTGCACTCGTGGATTTGGACTCACTAGTATCATCAAAACCCAAACCTAAACAACCACCGCCACCAAGCATCTCCTCCACATCTCACAACCCCTTCCTACAGACACAggGCCCCTCGTCAACAGGTATGGGAGTTACTCCAGGCAGTGCCATTTCCAGTAGAGGGGTGTCTCCGACCCCACCATCTGCTTCTAATCCTTTCGGCGCTACCCCGATGGCATCCATCTCCCCTCAACCTTCTTCGCTCGGTCTGAGCCAGCTCCGTACAAGCCCCATTCCCCAGAATCCTATGCTGGGTCACATGCCACCACCAGCAGTGGGAATGGTTCAGCCGGGGATGGGCATGCCAGGAATGGGGGTCCCTATGGCGGCCCCTGGTATGGGCATGGGAATGGTACAGTCCAGCCCAATGGGCATGCCTTTTGGTGGAATATCCCCCATGGGTCCCGCAGGAAATCCATTGCTGATGGGCCCTGGTGGCCCTGCGCAGCCTGCACTGATTTTGGGCGGGCCGTCGGGCGTGGGTGGAGTGATGGGAACAGGAGGATCTATGGGAGGTGGAACAACAGGCACAAGCACCAATCCTTTCCTCCTTTGAGAGATTTCACCAATCCCACGTGCCCTGTCCACTAAATCCAACCAATCCAAACCTGCCCTACCAACACAAACAGTTTGtgtttgacaaaaaaagaaatgtgtgtaCATCtctatatttaatgaaaaagtaaaaacaaaaatgtgttattttctttcacaaaa

Function

symbol description
epn1 Predicted to enable clathrin adaptor activity and phospholipid binding activity. Involved in negative regulation of sprouting angiogenesis. Predicted to be located in presynapse. Predicted to be extrinsic component of cytoplasmic side of plasma membrane; extrinsic component of postsynaptic membrane; and extrinsic component of presynaptic membrane. Predicted to be part of clathrin vesicle coat. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; endosome; and postsynapse.

NR:

description
PREDICTED: epsin-1-like isoform X1

GO: NA

KEGG:

id description
K12471 EPN; epsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261304.1 True 2678 mRNA 0.56 13 13506631 13516501
XM_043261305.1 False 2676 mRNA 0.55 13 13506631 13516502
XM_043261306.1 False 2606 mRNA 0.56 12 13506631 13516501

Neighbor

gene id symbol gene type direction distance location
u2af2a LOC107692567,LOC107672971,LOC107724853,LOC107598390 coding downstream 12380 13487351 ~ 13494251 (-)
cacng6b cacng6b,LOC107549474,LOC107692568,LOC107724866,LOC107744303,LOC107672978,LOC107598398 coding downstream 20921 13473475 ~ 13485710 (-)
pitpnc1b zgc:101640,LOC107692561,LOC107549471,LOC107737922,LOC107598395,LOC107672976,LOC107750023,LOC108437483 coding downstream 186868 13306028 ~ 13319763 (-)
josd2 josd2,LOC107549461,LOC107750011,LOC107737925,LOC107598457,LOC107692554,LOC107672995 coding downstream 302034 13201382 ~ 13204597 (-)
flcn flcn,LOC107549459,LOC107692552,LOC107750008,LOC107673020,LOC107598420 coding downstream 335647 13162930 ~ 13170984 (-)
aicda aicda,LOC107549448,LOC107692585,LOC107724977,LOC107744312,LOC107598400,LOC107672983 coding upstream 29778 13546280 ~ 13548312 (-)
nat14 nat14,LOC107724968,LOC107549449,LOC107744294,LOC107692586,LOC107672977,LOC107598397 coding upstream 36038 13552540 ~ 13555963 (-)
znf628 LOC107724809,LOC107549478,LOC107744293,LOC107598382,LOC107672962,LOC107692578 coding upstream 39748 13556250 ~ 13564227 (-)
il11a NA coding upstream 48900 13565402 ~ 13573595 (-)
rasip1 rasip1,LOC107549479,LOC107724795,LOC107744292,LOC107598383 coding upstream 75530 13592032 ~ 13604741 (-)
G112327 NA non-coding downstream 34945 13449507 ~ 13471686 (-)
G112339 NA non-coding downstream 44906 13455557 ~ 13461725 (-)
G112336 cacng7b,LOC107724890,LOC107549472,LOC107598394,LOC107672975,LOC106570002,LOC105902015 non-coding downstream 59453 13440670 ~ 13447178 (-)
G112315 NA non-coding downstream 72336 13431144 ~ 13434295 (-)
G112299 LOC107750016,LOC107549467,LOC107692576 non-coding downstream 214208 13289205 ~ 13292423 (-)
G112350 NA non-coding upstream 18219 13534721 ~ 13543311 (-)
G112361 NA non-coding upstream 90129 13606631 ~ 13609334 (-)
G112377 NA non-coding upstream 102185 13618687 ~ 13619336 (-)
G112385 NA non-coding upstream 132125 13648627 ~ 13736231 (-)
G112390 NA non-coding upstream 142503 13659005 ~ 13659470 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 1128182 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1639316 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 2094854 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 2119638 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 2220199 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 137558 13654060 ~ 13683909 (-)
G112478 NA other upstream 718052 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 981761 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 1065977 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1382680 14899182 ~ 14904907 (-)

Expression


Co-expression Network