LOC122360649


Basic Information

Item Value
gene id LOC122360649
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12392767 ~ 12397250 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261441.1
TACTGTCCTCAATGTCCTCAATCAAGAAATTTCAACAGTCATGCATGCTGGCTGGAGAATATGACAAAAGAAGGAACACTTTGACTCAGTATTTATTCCCAGTCAAACCAGGATGCTTCTATCTCAACCAATCATAATACATATTCAAAATGTATCCATTTAAGGTATTTATGCCCCTTAGATGTATTTATAAGCAAATATTCTTCTTACAAGCTAGCATGTACGGTctctaaaaaatgtaatgatcattttttgtttaaaaacttttatgttcaatgttttctttacaaaaaaaattatctacAAGTTGGAAATTACAGGTGGAAAACAGTGACATATGACGCAAAACATTACTCAGAGTCAATGATATAAACTCAATTTCTCCTCACATCTTAAATAAGAAAAGAGATTTTGTTGCCAtctacatacatttttcatttaatctggTAACAATAACATTAAGTCAGAATATCTGAGTTAGCATTATAGTTTCTCCTCCCCAAGTCATCCAACTCCACCCCTTTCAGATGGCCATAAAAACAGCAGCGTGCATTCATTTCACCATTCTACCATTCAACAAGATCTTAACCTAAGACTTGACAAAACTCTTCTGACCTTACAACAAGGAACAAAGAAGTCATGGATCCTGAAATCTCAAAATGTACTCAAAGCCTTACCACTGCTGAGGACATGAGGAACCAAACCAAACTTCTGATGCATTCTAATGCTAACTGGGAAGAGTATCTGTCTCCAGCACCTCTCTCCATAGCCATCCTGGGAGAGCTGGTTTTCATATCATCTGTAACAGATTTCTCTATCAATGAAAATCCCCCTAAAGATGGCTATAAGTTCATCAAATACCCTGATTCCTTTCGCGCTTGTCTCATGCAAGTGTGTAACTCTGGTTGGTGGGCATTTAATGAGGCCCATACGAGCATGGATCAGATTCGTCTCCATACTGCCCAGGTTCCAAATTACATGAAGACTGCTGTGAAGATTCTGTTCCAAGGTAATGATATGGTTGTAAATGCTCATCTTCCGAATCAGCTGAAAAATATCCAAGACATTGCAAATGAATGTCTGAAACTCTCGGATGCAACTGAAAAGCGTTTTTTGAATGTCATTTGTATAATACAAGAGCTGCTAGAGGCGTGTAAGAATGCACATCGCTTTTATGGGAAAGAATTGGAAGAGGTGAACAAGATAATAGAAGAGAACAATCTAAAGAAGCAGTCAGCTGAAGAGACCAAGAAAAGGACTGAGCAGTTAATGAATGCCATGAAGAAGAAAATGGAAGAAGCTAATGATAGCTACAAGCAAGCTCTGGATTCTCTCCCTAATGGATGGGAAATGATTGGTATGGATTTTGTAGGTGGGTTAGCACAGGCCATTACTGGTGTCATTGCTGGAACGGCATCTGCTATTACTAAACCAGTGAATGATGCAGGAAATGTGCTAGATGAAATACGATTGTACAGTAAGTCGGCTGAAATTTTAAATTGTGCCCAGAAAATTCAGGAAGAAATGGATGTGAATAGTAAGGATAATAACACTGatgacaatgaaaaaaattcGAAGATGGAATTCATAGgaaaacagttcaaaagaatCAGCAAAACATTAAAGGAAATCCCTGACTGCCCAGCAAAGCAACAAGCTCTGGAGTTATGCCAAGATGGCATAGAAATATGCAACCAGCTCACAAAATATGCACCAGATGGCATACATGTCAAAGCCAAAAACACTGAGATGATAGAAAAAGTTTTGGATCTGATCGAATCGGCCCGTGTTTTTGATTgcaaaagcaaagacaaaactAATTCTCCAGCCATTGCTCCAACACCGCCAATGATGCATAGAGAAGAAAATAAGGCAAATAACGCAAGTCCTTCTCAGAGGGCCACAGAAACTGCACGATTCAAAATAGAGCAGACCCGAGCTCAACTGAACAAGGCAAGAGAATCTTTTGAGAAGTGTGTGGAGAACCTAGAGAACAAAGAGAAGGAACTAACTGAAATCCTGGTAGTTCTGAGAAATTGCAACCTGAAAGAGATTGACTTCAAAACTACCATACAGATGCTGATCAAAGGAATGGATGCCATGGGGAGAGTGAAGGAGCAATGGCAGAAGATGGTTCGCTTCTTTCAGATGGTTTCCAACATTGTAAAAACCAGCCTGAGCACGACTCTCAAAAACTTTGTCTCCACATCAGAGAACACAAAACGTCTCCGCTACAATGAAAAGCTCTTTTCAAAAGATCTGCTGTACATTTAAGCCTTCCAAGCCTGTAACATTGCTAGTCTGGTCCACATGATCTCTGCAACATACACAGATATTTCCAGCAAGTACCTGATGGATCGTGTCAGTTCACTGGGAAAACTAATGGCCATGGATAAAACTAAACCAGAATTTGAGAGTGAGCGACTACTGCTTCAGAAAGGCTGTGATGAGGCAAAGGACAGCATCTTAAACCTTGTGAAGAAGAATAAAGCTGAGTATGACAGCATGAGCAAAGCAAGACTTGAAAAGATTGATCGAGAATTGCTTGCCATTCTTCCTGCTGCTTCACCAAAAGAAATCAAGAAAATTGAAAACATTGTTGAATCTGCATTCCTTATGGAAGACAGCATAGCAGGATACGTCTGAGGAATGCACTGAAGGAATGTGTATTTTCTAGTTTTACATTG

Function

GO: NA

KEGG:

id description
ko05140 Leishmaniasis
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261441.1 True 2687 mRNA 0.39 3 12392767 12397250

Neighbor

gene id symbol gene type direction distance location
slc6a19b slc6a19b,LOC107743232,LOC107662664,LOC107685553,LOC107596751,LOC105905464 coding downstream 165818 12216856 ~ 12226949 (-)
si:ch211-254p10.2 LOC107685554,LOC107596717,LOC107752844,LOC102209663 coding downstream 178418 12208105 ~ 12214349 (-)
rapgef5b LOC107596719,LOC107685551,LOC107581543,LOC107728526,LOC107674937,LOC107743169 coding downstream 189679 12155770 ~ 12203088 (-)
sp8b sp8b,LOC107685617,LOC107596752,LOC107728520,LOC107743231,LOC107684564,LOC101158882 coding downstream 351820 12035907 ~ 12040947 (-)
macc1 LOC107743168,LOC107685548,LOC107596642,LOC107728525,LOC107684550,LOC107550840 coding downstream 379823 12007457 ~ 12012944 (-)
LOC122360109 NA coding upstream 21868 12419118 ~ 12422119 (-)
ccdc12 ccdc12,LOC107743233,LOC107752847,LOC107581540 coding upstream 94248 12491498 ~ 12497557 (-)
setd2 LOC107743179,LOC107685560,LOC107752833,LOC107673014,LOC107581536,LOC107596709 coding upstream 180611 12577861 ~ 12599994 (-)
LOC122361014 mtbp,LOC107596625,LOC107685571,LOC107707175,LOC107673040 coding upstream 408978 12806228 ~ 12825561 (-)
col14a1a col14a1a,LOC107685600,LOC107707159,LOC107672958 coding upstream 441811 12839061 ~ 12944070 (-)
G111716 NA non-coding downstream 241890 12150542 ~ 12150877 (-)
G111713 NA non-coding downstream 253237 12139177 ~ 12139530 (-)
G111712 NA non-coding downstream 254995 12137461 ~ 12137772 (-)
G111690 NA non-coding downstream 311914 12080652 ~ 12080853 (-)
G111689 NA non-coding downstream 315760 12076453 ~ 12077007 (-)
G111788 NA non-coding upstream 40175 12437425 ~ 12439653 (-)
G111789 LOC107662667,LOC107752837,LOC107581613,LOC107581612 non-coding upstream 42536 12439786 ~ 12440874 (-)
G111791 NA non-coding upstream 44703 12441953 ~ 12442613 (-)
G111806 NA non-coding upstream 82184 12479434 ~ 12479788 (-)
G111807 si:ch211-257p13.3,LOC107752836,LOC107581541,LOC107685558,LOC107596636,LOC107673049,LOC107743172 non-coding upstream 83474 12480724 ~ 12480975 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 14318 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 525452 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 980990 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 1005774 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 1106335 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1256810 13654060 ~ 13683909 (-)
G112478 NA other upstream 1837304 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2101013 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 2185229 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 2501932 14899182 ~ 14904907 (-)

Expression


Co-expression Network