dnali1 (dnali1,LOC107733506,LOC107704957,LOC107587750,LOC107755261,LOC107597116,LOC107700738)


Basic Information

Item Value
gene id dnali1
gene name dnali1,LOC107733506,LOC107704957,LOC107587750,LOC107755261,LOC107597116,LOC107700738
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 24196697 ~ 24198654 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261532.1
CCCGATTAGTTTAGTTCACTTTCATGGACTGACCTGCGTGATGGGAAAAAGCGGTTGTTATAGCGACGGGAAACAACAAAACCAAACTTTTGCGGCATTACGCGGTTAACTTTTACACGAAGTCGTCAAAAGCGTTACATACTAAcgcaaaattttaaatatttctgtaagtTTTCTTGACACTTCCACATCACCAGCATGATTCTCCCGACTGACTCCTTGCTGAAGTATGATTATCCGGTGTTGGTGAGCAAGAATACAGAGAGGAAGTCTCCTAGGAGTCGCCCTTTGAAAGTGAGTCCCCAACAGCTGGTAGAGAGCGGCCCAGTCCCTCCTCCACCCAAACCCAAGAGCCCCTCAGTGGATGCCAGCAAACAGCAAACCGAGGAGATCCTGAATGCAATTCTACCACCAAGGGAATGGATGGAGGACAACCAGTTGTGGGTGCAGCCGGTGTCCAGCGCTCCGTGCACACGCATGGACGTTATTCATTTGCAAGAACAACTGGACAGAAGCTTGCAGGGAAGGCAGGCCAGAGAAACGGGCATCTGCCCTGTGCGCAGAGAGCTCTACTCTCAGTGCTTCgATGAGTTAATTAGACAGGTCACCATTAACTGTGCCGAGCGGGGCCATCTGCTGCTGCAAGTTAGAGATGAGATTCGTATGACCATCGCTGCCTATCAAACACTGTACGAGAGCAGCGTGGCCTTTGGCATGAGGAAAGCACTTCAAGCAGAGCATGGCATGGTTGACATGGAGAACAAGATTTTAAATCTGGAGAGCGAGAAGCGAGATTTGGAGAGGATGTTGAACGAGCAGAAGGCCAAATGTGAGGCCATCGAGAAACGGGAAGCAGAACGGCGAGAAATTGAGGAAAAGAAGCATGCTGAAGAGGTTCAGTTCCTCAAACGAACTAATCAGCAACTCAAGgcacAACTGGAGGGCATAATTACCCTGAGGAATAAGgcctaaatatttataataataatacacttacTCTCACaccattttaatgaataaaacttttattaaagc

Function

symbol description
dnali1 Predicted to enable dynein heavy chain binding activity. Predicted to be active in axoneme and filopodium. Orthologous to human DNALI1 (dynein axonemal light intermediate chain 1).

NR:

description
PREDICTED: axonemal dynein light intermediate polypeptide 1

GO: NA

KEGG:

id description
K10410 DNALI; dynein light intermediate chain, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261532.1 True 1035 mRNA 0.47 6 24196697 24198654

Neighbor

gene id symbol gene type direction distance location
rspo1 rspo1,LOC107756084,LOC107597137,LOC107587752,LOC107704954,LOC107700686 coding downstream 42275 24134883 ~ 24154422 (-)
utp11 utp11,utp11l coding downstream 109358 24084487 ~ 24087339 (-)
pnrc2 pnrc2,LOC107597121,LOC107700745,LOC107704949,LOC107716857,LOC107587761 coding downstream 380908 23811951 ~ 23815789 (-)
dop1a LOC107587763,LOC107704948,LOC107597122,LOC107700746,LOC107716858 coding downstream 385022 23789106 ~ 23811675 (-)
snap91a snap91,LOC107704947,LOC107716855,LOC107700747,LOC107597123 coding downstream 408995 23752336 ~ 23787702 (-)
rcc1 rcc1,LOC107704965,LOC107587746,LOC107597108,LOC107700729 coding upstream 112835 24311489 ~ 24316132 (-)
LOC122360159 hivep3,LOC107704966,LOC107732829,LOC107587744,LOC107700668,LOC107755436,LOC107597126 coding upstream 173449 24372103 ~ 24430886 (-)
ptprub ptprub coding upstream 427940 24626594 ~ 24808670 (-)
taf12 taf12,LOC107566933,LOC107588503,LOC107755488,LOC107700725,LOC107705731 coding upstream 637432 24836086 ~ 24839787 (-)
ctps1b ctps1,ctps1b,LOC107704971,LOC108433599,LOC108415321 coding upstream 641275 24839929 ~ 24846153 (-)
G115954 NA non-coding downstream 8103 24187937 ~ 24188594 (-)
G115939 NA non-coding downstream 118830 24077631 ~ 24077867 (-)
LOC122359981 NA non-coding downstream 139435 24044760 ~ 24057262 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding downstream 374409 23820519 ~ 23822288 (-)
G115911 NA non-coding downstream 379597 23816900 ~ 23817100 (-)
G116174 NA non-coding upstream 622847 24821501 ~ 24823410 (-)
G116179 rab42 non-coding upstream 634882 24833536 ~ 24833958 (-)
G116164 LOC107588518,LOC107755478,LOC107700723,LOC107588502,LOC107705715,LOC107704972,LOC107566931 non-coding upstream 636445 24835099 ~ 24835364 (-)
G116212 LOC107588526,LOC107755659,LOC107700712,LOC107704880,LOC107705924,LOC108433590,LOC103032252 non-coding upstream 880613 25079267 ~ 25082596 (-)
G116242 NA non-coding upstream 978798 25177452 ~ 25178607 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 521352 23668065 ~ 23675345 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other downstream 586856 23582993 ~ 23609841 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other downstream 672315 23519808 ~ 23524382 (-)
G115554 NA other downstream 1262730 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 1295510 22892102 ~ 22901187 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 118828 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 165986 24364640 ~ 24369566 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other upstream 215572 24414226 ~ 24473365 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other upstream 1466065 25664719 ~ 25710686 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 2181018 26379672 ~ 26384187 (-)

Expression


Co-expression Network