LOC122360792


Basic Information

Item Value
gene id LOC122360792
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 6650949 ~ 6690226 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261656.1
gagagagagagagagagagagagagagagagagagagagagacagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagctgggagaggagagagagagagagagagacagagagacagagagagagagagagagagagagagagagagagagagagagagagagagacagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagGAAGTCCAGAGGAACGGTTTGGGGAAAGCAATCCTCCTGGACCTGGGAAAATCACGCTCCAGTGAGCAGGCGATCATTGTCTCATCTCCCATAAAGAATCGGACAGATTTCAAACCCCATCATGAGATCCCAGCAGCTTCGGCACGGCTGGACGTCTCTCTGACGAGCCCTACCTGTCCCTTCCCGGGTTCAGATGAGAACGCCTCCCGTGAATCGTCTCCTCGGCCTGTTATCTGTAAAGAGGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261656.1 True 1482 mRNA 0.51 4 6650949 6690226

Neighbor

gene id symbol gene type direction distance location
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding downstream 84760 6561850 ~ 6566189 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding downstream 371372 6263504 ~ 6279577 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding downstream 388952 6248919 ~ 6261997 (-)
celf3b LOC107559029,LOC107713913,LOC107689166 coding downstream 750732 5877048 ~ 5900217 (-)
cers2b cers2b,LOC107688996,LOC107726244,LOC107689165,LOC107558627 coding downstream 777891 5853476 ~ 5873058 (-)
sox4b sox4,LOC107732138,LOC107722246 coding upstream 698490 7388716 ~ 7392318 (-)
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding upstream 1238303 7928529 ~ 7951085 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding upstream 1287403 7977629 ~ 7984289 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding upstream 1315492 8005718 ~ 8053185 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding upstream 1377349 8067575 ~ 8074304 (-)
G110227 NA non-coding downstream 442281 6139394 ~ 6208668 (-)
G110224 NA non-coding downstream 443144 6137107 ~ 6207805 (-)
G110223 NA non-coding downstream 447060 6201389 ~ 6203889 (-)
G110199 LOC107726242,LOC107689176,LOC107713897 non-coding downstream 456315 6191010 ~ 6194634 (-)
LOC122359843 NA non-coding downstream 470441 6177403 ~ 6180508 (-)
G110307 NA non-coding upstream 399500 7089726 ~ 7091063 (-)
G110315 NA non-coding upstream 504312 7194538 ~ 7195316 (-)
LOC122360226 NA non-coding upstream 603956 7294182 ~ 7296238 (-)
LOC122360224 NA non-coding upstream 640922 7331148 ~ 7386350 (-)
G110405 NA non-coding upstream 702840 7393066 ~ 7393325 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 311453 6279709 ~ 6339496 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other downstream 466816 5902577 ~ 6184133 (-)
G110215 NA other downstream 551022 6096675 ~ 6099927 (-)
G110208 adamts16,LOC107757336,LOC107558631,LOC107689003,LOC107726256,LOC107657842,LOC568792 other downstream 616172 6029208 ~ 6034777 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other downstream 832331 5817040 ~ 5818618 (-)
G110303 NA other upstream 391736 7081962 ~ 7083524 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other upstream 505264 7195490 ~ 7201381 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other upstream 751672 7441898 ~ 7618596 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other upstream 1137989 7828215 ~ 7830750 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other upstream 1392674 8082900 ~ 8092455 (-)

Expression


Co-expression Network