LOC122360822 (LOC107596715)


Basic Information

Item Value
gene id LOC122360822
gene name LOC107596715
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11493099 ~ 11501213 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261679.1
ATGCGAGAAAAAGCCATCCAGGCCTCTACTTCTCACGTATGGCTGGGTCTCCGTTACACCTGCACCTTCAACTTCTGGTTCTGGATAAAGAACAGAGAAGCAGGCTGTTACCAGAACTGGGCGCCTGGTCATGGGCCACGTGGTTGCAGGAGTGTGGGCTGTCAGGAGCTATGGAGTCCACTGGAGGGCACCGTTGGTGCTTTTGTCCTTCACTTCGAGCCAAATATCTCACCGGTATCACTTCGTAAATATCAGAAAGAACTGGAGCGATGCTCAGAGATTCTGCCATCAGAGCAACTTTTCATTTCGTTTTGGAATATCAACCTGCCGAAACCCATCGGCAGACACCGCAACTGTACTGTAGTGATGGTGAACCGAACAGGGAGATGGAAAAGCATCCGATGTGACACCACTCTGCCCTTCATCTGTCACGGTGATCTTAAACCAACCACTAAACCAGCAACCACAACCAGACAGAATCCAAGTGCATCtctcaaatCTATTCCTGGATCAGCAACAACACAGAACAGACCACTTCAAAACACAACCGATGCGGGATATACAAACAGTAAGACAATGCAAATAATCACAAGTGCAGAGCAAGATAACCTGATTCTGGTCCGTGAGAACCTGACGTGGACAGAAGCTGCGAGTTACTGCAGAAAGCACCACGTGGACCTGGTCTCCATTCACAGCGAGGAGCTTCAGAGCAGGACGGCGAGAAAAGCCATCCAGGCCTCTACTTCTCACGTATGGCTGGGTCTCCGTTACACCTGCACCTTCAACTTCTGGTTCTGGATAAAGAACAGAGAAGCAGGCTGCTACCAGAACTGGGCGCCTGGTCATGGGCCACGTGGTTATGAGGAGTGTGGGCTGTCAGGAGCTATGGAGTCCACTGGAGGGCACCGTTGGGTCGGGAGACCGAGAGACAGAAAGATTCAATTTCATCTGCCAAATATGTACTGGTGCGTTCTGACCACAAAAAGAGAAGAGACTGAATGA

Function

NR:

description
PREDICTED: C-type mannose receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261679.1 True 1002 mRNA 0.50 6 11493099 11501213

Neighbor

gene id symbol gene type direction distance location
LOC122360214 LOC107752837,LOC107662667,LOC107581612 coding downstream 39590 11437373 ~ 11453509 (-)
LOC122361032 LOC107746978,LOC107684223,LOC107551206,LOC107704083,LOC107751909,LOC107601659 coding downstream 669910 10817891 ~ 10823189 (-)
LOC122361028 cabz01093075.1,LOC107601667,LOC107751875,LOC107746976,LOC107704092,LOC107684228,LOC107551204 coding downstream 682082 10808337 ~ 10811017 (-)
colec10 LOC107738939,LOC107574455,LOC107677951 coding downstream 905381 10571751 ~ 10587718 (-)
mal2 mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116 coding downstream 923302 10553160 ~ 10569797 (-)
skap2 skap2,LOC107743153,LOC107684555,LOC107685583 coding upstream 97118 11598331 ~ 11614258 (-)
hoxa2b hoxa2b,LOC107685611,LOC107684556,LOC107550809,LOC107743221,LOC107744722,LOC107596758 coding upstream 118300 11619513 ~ 11630905 (-)
hoxa9b hoxa9b,LOC107743222,LOC107684557,LOC107744723,LOC107685612,LOC107550810,LOC107596757 coding upstream 127886 11629099 ~ 11633344 (-)
hoxa10b hoxa10b,LOC107685613,LOC107743223,LOC107550811,LOC107744724,LOC107684558 coding upstream 132277 11633490 ~ 11636603 (-)
hoxa11b hoxa11b,LOC107743198,LOC107596728,LOC107685585,LOC107744726,LOC107684537,LOC107550813 coding upstream 137792 11639005 ~ 11641509 (-)
G111508 NA non-coding downstream 4272 11487682 ~ 11488827 (-)
LOC122360676 NA non-coding downstream 11872 11480106 ~ 11481227 (-)
G111453 NA non-coding downstream 226274 11266596 ~ 11266825 (-)
G111452 NA non-coding downstream 226885 11266003 ~ 11266214 (-)
LOC122360619 NA non-coding downstream 228861 11261627 ~ 11264238 (-)
G111516 NA non-coding upstream 42703 11543916 ~ 11544332 (-)
LOC122361126 NA non-coding upstream 61665 11562878 ~ 11569737 (-)
G111559 NA non-coding upstream 161705 11662918 ~ 11666274 (-)
G111623 NA non-coding upstream 272706 11773919 ~ 11774181 (-)
G111625 NA non-coding upstream 279574 11780787 ~ 11781172 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 81322 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 106106 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 206667 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 609675 10857520 ~ 10883424 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other downstream 728794 10745576 ~ 10764305 (-)
LOC122361049 c16h2orf66,LOC107743229 other upstream 364467 11865680 ~ 11867315 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 862572 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 2152847 13654060 ~ 13683909 (-)
G112478 NA other upstream 2733341 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2997050 14498263 ~ 14503136 (-)

Expression


Co-expression Network