G10878


Basic Information

Item Value
gene id G10878
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16535268 ~ 16535522 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11982
GCCTGATCAAAAGTTGTTATAGTGATGTCTTGACTAATTATAACCTATTTCACTATTGTATGATGTTTATTACATTAAGTGCACAAACAACATGCTTGAAATATAAAATGAATGCCTATGTATCGCATAATAAAACAAACTGGAAACAGATATTGGAAGCAAAAAACATAAGCTAGCAGACTAATCGGGTAGATGTATGCTATGCTAGTACATATGCTAAATAAAAAACAGTACGAACGAAAAGTGCTTGATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11982 True 255 lncRNA 0.31 1 16535268 16535522

Neighbor

gene id symbol gene type direction distance location
CI01000000_16468276_16479177 NA coding upstream 54209 16467489 ~ 16481059 (+)
CI01000000_16375958_16382103 G3BP1 coding upstream 152710 16373958 ~ 16382558 (+)
CI01000000_16362843_16368520 SPARC coding upstream 166748 16362691 ~ 16368520 (+)
CI01000000_16339900_16340277 ATOX1 coding upstream 194887 16339900 ~ 16340381 (+)
CI01000000_16282545_16293288 MTNR1AL coding upstream 240603 16282126 ~ 16294665 (+)
CI01000000_16573665_16580545 SLC25A48 coding downstream 38143 16573665 ~ 16580958 (+)
CI01000000_16611284_16612778 CPLX2, CPLX1 coding downstream 75762 16611284 ~ 16613885 (+)
CI01000000_16676128_16679215 SLC26A2 coding downstream 140514 16676036 ~ 16679240 (+)
CI01000000_16781396_16802242 HTR4 coding downstream 245874 16781396 ~ 16802418 (+)
CI01000000_16835058_16848950 NA coding downstream 299398 16834920 ~ 16849092 (+)
G10869 NA non-coding upstream 10483 16524585 ~ 16524785 (+)
G10380 NA non-coding upstream 108093 16423358 ~ 16427175 (+)
G10364 NA non-coding upstream 148543 16386342 ~ 16386725 (+)
G10360 NA non-coding upstream 179330 16355733 ~ 16355938 (+)
G10359 NA non-coding upstream 180070 16354892 ~ 16355198 (+)
G10879 NA non-coding downstream 109 16535631 ~ 16535977 (+)
G10891 NA non-coding downstream 20604 16556126 ~ 16556496 (+)
G10893 NA non-coding downstream 23693 16559215 ~ 16559484 (+)
G10903 NA non-coding downstream 45790 16581312 ~ 16584118 (+)
G10911 NA non-coding downstream 90486 16626008 ~ 16626492 (+)
G10201 NA other upstream 604706 15930266 ~ 15930562 (+)
G9201 NA other upstream 2300327 14215024 ~ 14234941 (+)
G7522 NA other upstream 4356260 12178369 ~ 12179008 (+)
G7514 NA other upstream 4398260 12136522 ~ 12137008 (+)
G7153 NA other upstream 5289635 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 803632 17339154 ~ 17346200 (+)
G11465 NA other downstream 1348431 17883953 ~ 17887462 (+)
G11521 NA other downstream 1497217 18032739 ~ 18164112 (+)
G11801 NA other downstream 2145345 18674116 ~ 18745376 (+)

Expression


Co-expression Network