LOC122360896 (pde11al,LOC107743218,LOC107684552,LOC103364058)


Basic Information

Item Value
gene id LOC122360896
gene name pde11al,LOC107743218,LOC107684552,LOC103364058
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8341600 ~ 8363640 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261729.1
TGGACTCCAGCGACAATAAAGCAATACATTCAATTATCATGTAATATTAAACTCATAATGACTGCGCAATGGGCTATTCATCCAGCTGGAATATACGTATTATGGATAGActtttaatgacaaataaaagcagccatTATTTTCAGACTGGGGCTACTTCAAAAGTGTTCAATAAAGGAACATATTAGaacatattctctctctctctctctctctctctctctctgtctgtcacacacacacgggtaGCTATAAAAAGACCTTCACGAAACAACAACAGATTCGTTAAACTTCCACCAGACACACAAAAGAGAAACATCCATTTAGTCTCAGAAACACTGAACAGACCATTCGCTTGCTTTCATGTTTATTTAGGGCTCTTTAGAGGAAATCTGCGTCGCTTGAACAAATCGCTTATTACTACTTCAACGTCATCGCGCATCggtcatatttcattattcatttgacCGTTTAACTCCACGAGCCTCATAAAAGACAGCGCGAGGAGGAAGGCTGGAGAACGGCGATGTGTGAATGGCAGATGGACGCGTGAAGCGCGCGCAGCAGCAGTAGCTGAGCGTTACTGCAGACGGCTCCACGACACTTTGGCGGCGCAGACATGACAACTTTTGATTTTTCCGACGTGGAGGCGTTTTTGGATTGCCACCCGGAGCTCTTTGAGGAATACCTCGTCAGGAAGGGGAAATGCGACACCCTGAGCAGGTGGCTCAAAGAGCACCCGCCGTCCAAAACCTCTCCGGCGGCGGAGGAGAAGCGCGGCGCCGCGAGGGATCCCTTCTGGCCCATGAACCCCGACGGGCTGAAGCGCAGATCGTCCCACATGGAGCTCCGCAGGAACGCCGCCCGCTCCAAAGCGATGACGGCGCACCGGACCTACGACGAGCACGTCAGTCTCGCGGCTCACGAGTCCCAGTCGAGCATGCGACGGCGCGCGCTGCTGCGGAAAGCCAGTTCGTTGCCGCCGACCACGGCGCACATCTTGAGCGCGCTGCTCGAGTCCCGGGTGAACGTGCCTCAGTATGCCTCCAGCGCCATCGACTACAAATACAGACTTAAAGAGTCCAACGAGAGGGAGTTCTTCCTCGAGCTGGTCAAAGACATTTCTAACGAACTTGACATGACGAACCTCAGCTACAAGATTCTTATCAACGTGTGCATCATGGTGAACGCAGACAGGTGCTCGCTTTTCCTAGTGGAGGGACCGTCTCATAAGAGGACGCTGGTGTCCAAGTTTTTTGACGTGCACTCGGGTACGACGGTGCGACCCTCTTCGAGCACTCTGGACTCAAACGAAGTCCAGGTTCCGTGGGGAAAAGGCATAATAGGTTATGTAGCAGAACACGGAGAAACCGTCAACATCCCGAACGCATACGAGGACCATCGTTTCAGTGATGAAATCGACAAGCTGACGGGCTATAAGACTCAGTCCATTCTGTGCATGGCCATCCGCAACAGCGACGGAGAAGTCATCGGCGTAGTGCAGGCCATCAACAAGAACCCCAGCGGGACTCCATTCACAGAGGACGATGAGAAGGTGCTTCAAATGTATCTACCATTCTGTGGAATATCGATCTCCAACGCCAAACTCTTCTCCGAATCCCGCAAGGAGTATGAGAGGAGCAGGGCCCTGCTGGAGGTGGTGAATGATCTGTTTGAGGAGCAGACGGACCTGGAGAAGATCGTGAGAAAGATAATGCAGCGTGCGCTGACATTGCTGCAGTGTGAGCGATGCTCGGTGCTACTGCTGGAAGACATCCACTCTCCCGTAGTAAAGTTCTCCCAGACCTTTGAGCTCATGTCTCCGCTGTGCAGCGTCGATCGTGACATCAGCATGGAGAAGGTGTCTTGTTCGGACTGGCTGATCAATAACAGCATTGCTGAGTTGGTAGCATCCACCGGGCTGCCTGTTAACATCAGTGACGTCTGTCAGGACCCCCGCTTTGATGCTGAGGCAGACCAGGCTTCTGGTTTTCATATCCGATCAGTTTTATGCGTCCCCATCTGGAATCGGACACATCAGATTATTGGCGTTGCCCAGATTCTGAATCGCTTGGACAGAAAGACATTTAATGACGCAGATCAAAGGTTATTTGAGGCATTTGTTATTTTCTGCGGTCTGGGCATTAACAACACAATGATGTATAACCAGGTTAAAAAGACTTGGGCCAAGCAGTCTGTGGCTTTAGATATGTTGTCTTATCATGCTACATGCTCCAAGGCAGAGGTTGATCGACTGAAGGCTGCTAAGATTCCCCTAAGCAGCGAGCTCGGGATCGATGAGCTCCACTTTAATGACTTTTCTCTGGACAACGACGCCATGATCACTGCCTCCCTGCGGATGTTTTTGGAGCTCGGTGTGGTGCAGAAATTCAAAATTGATTACGAGGTGCTGTGCCGCTGGCTGCTTACCGTGAGGAAGAACTACCGCACCGTAGCCTATCACAACTGGAGGCATGCCTTCAACGTCTCGCAGTGCATGTTTGTTATGATCACCACTGCTGGGTTCCAGGAGGTGCTGACAGACACCGAGACTCTTGCGCTTATGGTTGGGTGTTTCTGCCATGACCTCGACCATCGTGGCACTAACAACGCCTTTCAGGCAAAGTCTGGCTCAGCACTTGCTCTCCTGTACGGAACATCTGCCACGCTTGAGCATCATCATTTCAACCACGCCGTCATGATCCTGCAAAGTGAGggtcACAACATTTTTGCAAATCTATCCTCCAAAGAGTACAGCAACATGATGCAGCTACTGAAACAGGCCATTCTGTCCACAGATCTCACCTTGTACTTCAAaagaagaacCAAGTTCTTTGAGTGTGTTTTGTCGGGACAGTTCAGTTGGAGTAATGAAGAACATAGAGACGTGTTTAGGTCTATGCTGATGACTGCGTGTGACTTGGGTGCAGTGACTCGACCATGGGAGATCTCAAAACAGGTGGCTGAATTGGTGACCAGCGAATTCTTTGAACAAGGTGACAGGGAAAGATCAGAGCTGAAGCTTACACCGGCTGCCATTTTTGATCGCAATCGTAAAGATGAGCTTCCCGTGCTCCAGTTAGAATGGATTGATGGAATTTGCAAGCCGTTATATGAGGCGCTTGTGAAGTTGAATAGGAAGCTTCAGCCGATGGTAGATGGAATTGATGCCAACCGAAAGAAGTGGGAGGAGCTTTGTCGTTCATTTCAGCAAACACGGAGAGCCTCTGAGTGCATCTCCAGTCTGGAAGCAGGAGAGACAGAAACGCCTCAGAGTCCAGACTCCACCCACGAGCCGGAATCAAGTCAGAGTGAGGTGACCAATCAGAGACGAGACTCCACCCACTGTGTGGAGCCAAGTCAAGCCACGATAGCCAATCACAAATAAGAGGCGTGATGTGACCATTAAAGGACGGCCCACTGAGTCAGGGGTTCCCAAACGACTTTTTTCTGAAccttattttaagttatttagattt

Function

symbol description
pde11al Predicted to enable cGMP-stimulated cyclic-nucleotide phosphodiesterase activity. Predicted to be involved in negative regulation of cAMP-mediated signaling; negative regulation of cGMP-mediated signaling; and signal transduction. Human ortholog(s) of this gene implicated in primary pigmented nodular adrenocortical disease. Orthologous to human PDE11A (phosphodiesterase 11A).

NR:

description
PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0046872 metal ion binding molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function

KEGG:

id description
K13298 PDE11; dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261729.1 True 3479 mRNA 0.50 21 8341600 8363640

Neighbor

gene id symbol gene type direction distance location
LOC122360914 snx10b,LOC107743219,LOC107596759,LOC107685610,LOC107684554,LOC107744712,LOC108441519 coding downstream 43119 8296026 ~ 8298481 (-)
LOC122360799 tmtopsa,LOC107573386,LOC107550426,LOC107653523 coding downstream 85063 8239331 ~ 8256537 (-)
adipoqb adipoqb,adipoq,LOC107681756,LOC107755695,LOC107566714,LOC100653481 coding downstream 141261 8195101 ~ 8200339 (-)
mpp7b LOC107681820 coding downstream 197646 8105226 ~ 8143954 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding downstream 267296 8067575 ~ 8074304 (-)
pals2a mpp6a,mpp6,LOC107749029,LOC107685533,LOC107596657,LOC107678134 coding upstream 71006 8434646 ~ 8451791 (-)
LOC122360915 NA coding upstream 89183 8452823 ~ 8453220 (-)
LOC122360918 stk31,LOC107678124,LOC107685609 coding upstream 91326 8454966 ~ 8466094 (-)
uts2r3 si:dkey-27n14.1,LOC107685608,LOC107749301,LOC107596760,LOC107678125,LOC107550807 coding upstream 110458 8474098 ~ 8475848 (-)
LOC122360899 LOC107596664,LOC107748923,LOC107685526,LOC106957056 coding upstream 176962 8540602 ~ 8544277 (-)
G110548 NA non-coding downstream 102424 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 105807 8234908 ~ 8235793 (-)
LOC122360778 NA non-coding downstream 348733 7988950 ~ 7992867 (-)
LOC122360975 NA non-coding downstream 381225 7958881 ~ 7960375 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding downstream 452305 7887795 ~ 7889295 (-)
G110753 NA non-coding upstream 184142 8547782 ~ 8551552 (-)
G110773 NA non-coding upstream 226258 8589898 ~ 8590634 (-)
G110807 NA non-coding upstream 481885 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 637147 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 640898 9004538 ~ 9005206 (-)
G110556 NA other downstream 24915 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 39355 8298789 ~ 8302245 (-)
G110544 NA other downstream 125005 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 249145 8082900 ~ 8092455 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 510850 7828215 ~ 7830750 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 269710 8633350 ~ 8636222 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 782290 9145930 ~ 9152183 (-)
G110974 NA other upstream 907331 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1513571 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 2381936 10745576 ~ 10764305 (-)

Expression


Co-expression Network