LOC122360899 (LOC107596664,LOC107748923,LOC107685526,LOC106957056)


Basic Information

Item Value
gene id LOC122360899
gene name LOC107596664,LOC107748923,LOC107685526,LOC106957056
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8540602 ~ 8544277 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261733.1
aacactgatctTGGATTCTCAttatatgaagatattttgatttttttttaattatgcagatGTTAAATATTGCTTACTTGtgtgaataaatgcaaaactaCATTGTGTTGTCATgatgtaaaaaggaaaaaagatatgagaagaaataaataaaaaataatagtgagTAAGTAAAAATGTTGAACTATCCCATTTTAGACATGCTTTACCGTGTGGACATGTTTGGAATTAGTTAAACAGGTCTATTAACAGTTGTCCAACAGTGAATATACGTCACAGCATGAATTCTTTAATTTAGAGTCAACTACCCCTTTAACAAAATGATCTACTTTTAAATCATGTCATATTTCCTGTTCTCTGGATCTTGTTCCATTATGTTGAACGCCCCCATAGATATGTAAAAACAGCACTTTGTCTGAGGACTGAAAAGTGAAGGCAATTTGTCTGTGGCAACCAGCAGAGCTCTCAGGCAGGAGAATGTCTTAATGAGGGTCCGAGATTAAAGACATCAATTAAAGGGCCGTTAAGCGCTTAACCGGTGCGTAGTGTTTGCTAACACTTAACAAGCGCCGTTTTTTGACAATGCACACGGCCCGAACCAGTTGACTTCTAGGtaattgcttttcttttcatttcgcTGTTCTTCTCTTTAATGGTGCCGTCTTGCCATCCTTTATCTAAGCAGACAAAGAATGGCTCGTTCTGTGGCATCATCAATGAATCGATGCCACCCTCCCCTCATCattcgctctctctttctctctctctctctctgtctctttccgTCTCTGTTTTTTGGTCAGTCAGGGTGCATGACCCGTGTTCTTCATCTCAAAGCGGATTCTTACTGAGCAACAGAAGGTAAGCGCTAAATCTTGTGTCGAAATGCTTCTTCAGTTTTGCGTGGTATACGAgcgaaaaacaatattttgactGAATCTGATGTCTCTCGTGCTCATAAATTGTCCTGATTGTGTTTCCAAAGCTATGCGTCCGTCCAGTATTTTGACCTTTGAAGCGGGGTTGGAGTCTGGAGTGCCATGGGGCCGTGATCTTTTTACTTTTGTGACTTCAGCAGCTGGTCACATGATGAGGACCTTGCAAAGACCACGTAAAAACAAGCCATCAAAAAGACAAGTCAATCATCGCAGGTTTCTGCACAACATGATACAGAGaaaatttgctgaaatagAGGCAGCGAATCATCAGCTGGCGTCTGCATTATTTTCAACTGATAAACCCCCTGATCATCTAACTCCCAGACTATCTCACATTGTAACAGAAGTCACAGACCAGTCTCCCAAACCTTCTAAAAAAGCTATCGAAACCTTTATAAATGCTGACAAAACCGAAGCGCTTCCTGAACAACAAGAAGATGTGTGTGACCTCTGGACATTGGACAGTCTTTTGGACACCCATGTGGCTGACAAAGGTTTTTCACCGTTCTCCAACAGCAAAgaaacacatccgagaactgagaAAGGCAGCGAAGCTTTGGAAAACCGTCCTGCCAGCTCAACGGAGAAGGACATCGACTTCAGCTTCAGCTTCGAAAGGCAGTCAACATCTACTGACGTAGAAAGCTTAACACAACTGAACAACAGTCTCCTAGAGGACAGCGTGTCCTCCTGGTTTGGGTCCATTGAAAGAACAAGAACCTGTTCGAAACCACGTCTCACCAAGTACCACGACGTGAAGTTGCTCCCAACAGACGTTGATGTTCAAGACCTGTCACCTCCTTCTCCGGTGATCTCATTATTGTCTTTGGATTCATGTGATTTGGAGGTCCAGATGCTCATAGACGCAGAGCGCAATGTGAACCAAGTGCAAAACGACGCCATCGCAGAGAGTCTCCAAATGGATGTGATGGACGATCTTGAACTCCTGGATTGTTCTGGTACTCATGGAGTGTGGATGGATCACGGTGAAGAGGATGGACCATGTTTACAGGAAGCGTTTCCAAGCTCTCTGGTTTCAGATCTAGAGAACCTAACAGGTTCTGGTGGTGGGACCTCCAACTCCATCTCTAATTTGGGCCAAACGGGTCATGAACTTTTTGCAGATGTTCTCTGCAGTCAAGAGCCACATAGATGTAGTTTCCATCACGATCAAATAAACTACGCCATGAACCACAATAACGTTCTAGAAGAGCGTTTTGGTCAGGCTGAAGCTTGCATGAAGACGAATGGAAAGGAGGATGGTTATTTAGATGCAGATTTTTCTGTCATGGATGGTAATGTTACAAGCAACCACATGTTCTCAGGATTTGAGAGTCAGTTGGACCAATCCAAAATGATTCTTTATGACAGCTGGGAACAACAAGCTCTAAAAAGCTCGTATAAGAACTATACAGCTGCAGATCAGATTGTGACGCAAGGCACTGATGTCAGAAATGTTGTACAGGTTGAGAATCTCAACCAGGCCCAATGCCCGATAACGTGCTGCCTCGAAGGCTTTTGTTATCATGAAGAAGACCcgtgtttttacacaaaattcaGAGGCAGTCACAACTTTGAGGGCGTGGCTAGATCTTTCCCAGCCAAGCTGCATAAGCTCCACCCCACTCCAATTCTGACTCCGCCTCTAGATGATGATTGGTTGTTCAGTAATATCGTGGCAGAGGAAGaggtaaatattataaataatacatttggaaAGTATTGACCAGTCATTGGACAGTAATTGTTCTCATGAATTTCACTGTATCCGGGGATGTTTGATTATTAcacttttatgattttatgatcATTTCTGTGAAATGTTCTTGTCTGTGgtgagaaaaatgtaatattttctgtgATGAAAACTGTATGGGTATCGTAACATATTGCAAAAacaatcaattatttaaatgaataattttaattttcaaatttaaaatgattgcatttaaaGGATTTAGTGTTTCATTGTCTTTTGTCcaatatggtttaaaaaaaggtgctttataagttatttatatattttatttttgcatttaaattacattatgagCATGAATTAAACTTTGAAAT
>XM_043261734.1
aacactgatctTGGATTCTCAttatatgaagatattttgatttttttttaattatgcagatGTTAAATATTGCTTACTTGtgtgaataaatgcaaaactaCATTGTGTTGTCATgatgtaaaaaggaaaaaagatatgagaagaaataaataaaaaataatagtgagTAAGTAAAAATGTTGAACTATCCCATTTTAGACATGCTTTACCGTGTGGACATGTTTGGAATTAGTTAAACAGGTCTATTAACAGTTGTCCAACAGTGAATATACGTCACAGCATGAATTCTTTAATTTAGAGTCAACTACCCCTTTAACAAAATGATCTACTTTTAAATCATGTCATATTTCCTGTTCTCTGGATCTTGTTCCATTATGTTGAACGCCCCCATAGATATGTAAAAACAGCACTTTGTCTGAGGACTGAAAAGTGAAGGCAATTTGTCTGTGGCAACCAGCAGAGCTCTCAGGCAGGAGAATGTCTTAATGAGGGTCCGAGATTAAAGACATCAATTAAAGGGCCGTTAAGCGCTTAACCGGTGCGTAGTGTTTGCTAACACTTAACAAGCGCCGTTTTTTGACAATGCACACGGCCCGAACCAGTTGACTTCTAGGtaattgcttttcttttcatttcgcTGTTCTTCTCTTTAATGGTGCCGTCTTGCCATCCTTTATCTAAGCAGACAAAGAATGGCTCGTTCTGTGGCATCATCAATGAATCGATGCCACCCTCCCCTCATCattcgctctctctttctctctctctctctctgtctctttccgTCTCTGTTTTTTGGTCAGTCAGGGTGCATGACCCGTGTTCTTCATCTCAAAGCGGATTCTTACTGAGCAACAGAAGCTATGCGTCCGTCCAGTATTTTGACCTTTGAAGCGGGGTTGGAGTCTGGAGTGCCATGGGGCCGTGATCTTTTTACTTTTGTGACTTCAGCAGCTGGTCACATGATGAGGACCTTGCAAAGACCACGTAAAAACAAGCCATCAAAAAGACAAGTCAATCATCGCAGGTTTCTGCACAACATGATACAGAGaaaatttgctgaaatagAGGCAGCGAATCATCAGCTGGCGTCTGCATTATTTTCAACTGATAAACCCCCTGATCATCTAACTCCCAGACTATCTCACATTGTAACAGAAGTCACAGACCAGTCTCCCAAACCTTCTAAAAAAGCTATCGAAACCTTTATAAATGCTGACAAAACCGAAGCGCTTCCTGAACAACAAGAAGATGTGTGTGACCTCTGGACATTGGACAGTCTTTTGGACACCCATGTGGCTGACAAAGGTTTTTCACCGTTCTCCAACAGCAAAgaaacacatccgagaactgagaAAGGCAGCGAAGCTTTGGAAAACCGTCCTGCCAGCTCAACGGAGAAGGACATCGACTTCAGCTTCAGCTTCGAAAGGCAGTCAACATCTACTGACGTAGAAAGCTTAACACAACTGAACAACAGTCTCCTAGAGGACAGCGTGTCCTCCTGGTTTGGGTCCATTGAAAGAACAAGAACCTGTTCGAAACCACGTCTCACCAAGTACCACGACGTGAAGTTGCTCCCAACAGACGTTGATGTTCAAGACCTGTCACCTCCTTCTCCGGTGATCTCATTATTGTCTTTGGATTCATGTGATTTGGAGGTCCAGATGCTCATAGACGCAGAGCGCAATGTGAACCAAGTGCAAAACGACGCCATCGCAGAGAGTCTCCAAATGGATGTGATGGACGATCTTGAACTCCTGGATTGTTCTGGTACTCATGGAGTGTGGATGGATCACGGTGAAGAGGATGGACCATGTTTACAGGAAGCGTTTCCAAGCTCTCTGGTTTCAGATCTAGAGAACCTAACAGGTTCTGGTGGTGGGACCTCCAACTCCATCTCTAATTTGGGCCAAACGGGTCATGAACTTTTTGCAGATGTTCTCTGCAGTCAAGAGCCACATAGATGTAGTTTCCATCACGATCAAATAAACTACGCCATGAACCACAATAACGTTCTAGAAGAGCGTTTTGGTCAGGCTGAAGCTTGCATGAAGACGAATGGAAAGGAGGATGGTTATTTAGATGCAGATTTTTCTGTCATGGATGGTAATGTTACAAGCAACCACATGTTCTCAGGATTTGAGAGTCAGTTGGACCAATCCAAAATGATTCTTTATGACAGCTGGGAACAACAAGCTCTAAAAAGCTCGTATAAGAACTATACAGCTGCAGATCAGATTGTGACGCAAGGCACTGATGTCAGAAATGTTGTACAGGTTGAGAATCTCAACCAGGCCCAATGCCCGATAACGTGCTGCCTCGAAGGCTTTTGTTATCATGAAGAAGACCcgtgtttttacacaaaattcaGAGGCAGTCACAACTTTGAGGGCGTGGCTAGATCTTTCCCAGCCAAGCTGCATAAGCTCCACCCCACTCCAATTCTGACTCCGCCTCTAGATGATGATTGGTTGTTCAGTAATATCGTGGCAGAGGAAGaggtaaatattataaataatacatttggaaAGTATTGACCAGTCATTGGACAGTAATTGTTCTCATGAATTTCACTGTATCCGGGGATGTTTGATTATTAcacttttatgattttatgatcATTTCTGTGAAATGTTCTTGTCTGTGgtgagaaaaatgtaatattttctgtgATGAAAACTGTATGGGTATCGTAACATATTGCAAAAacaatcaattatttaaatgaataattttaattttcaaatttaaaatgattgcatttaaaGGATTTAGTGTTTCATTGTCTTTTGTCcaatatggtttaaaaaaaggtgctttataagttatttatatattttatttttgcatttaaattacattatgagCATGAATTAAACTTTGAAAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107596664 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261733.1 True 3014 mRNA 0.41 3 8540602 8544277
XM_043261734.1 False 2890 mRNA 0.41 4 8540602 8544277

Neighbor

gene id symbol gene type direction distance location
uts2r3 si:dkey-27n14.1,LOC107685608,LOC107749301,LOC107596760,LOC107678125,LOC107550807 coding downstream 64754 8474098 ~ 8475848 (-)
LOC122360918 stk31,LOC107678124,LOC107685609 coding downstream 74508 8454966 ~ 8466094 (-)
LOC122360915 NA coding downstream 87382 8452823 ~ 8453220 (-)
pals2a mpp6a,mpp6,LOC107749029,LOC107685533,LOC107596657,LOC107678134 coding downstream 88811 8434646 ~ 8451791 (-)
LOC122360896 pde11al,LOC107743218,LOC107684552,LOC103364058 coding downstream 176962 8341600 ~ 8363640 (-)
plekhg6 LOC107748912,LOC107685524,LOC107596731,LOC107550787,LOC107744705 coding upstream 14059 8558336 ~ 8571473 (-)
tnfrsf1a LOC107685522,LOC107748890,LOC107596732 coding upstream 29750 8574027 ~ 8580269 (-)
si:dkey-260g12.1 NA coding upstream 47958 8592235 ~ 8600129 (-)
iffo1b iffo1b,LOC107685521,LOC107596667,LOC107748876,LOC107550819,LOC107744683,LOC107699931 coding upstream 56431 8600708 ~ 8617241 (-)
opn9 LOC107685604,LOC107699923,LOC107596762,LOC107550785,LOC107744717 coding upstream 73354 8617631 ~ 8625519 (-)
G110548 NA non-coding downstream 301426 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 304809 8234908 ~ 8235793 (-)
LOC122360778 NA non-coding downstream 547735 7988950 ~ 7992867 (-)
LOC122360975 NA non-coding downstream 580227 7958881 ~ 7960375 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding downstream 651307 7887795 ~ 7889295 (-)
G110753 NA non-coding upstream 3505 8547782 ~ 8551552 (-)
G110773 NA non-coding upstream 45621 8589898 ~ 8590634 (-)
G110807 NA non-coding upstream 301248 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 456510 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 460261 9004538 ~ 9005206 (-)
G110556 NA other downstream 223917 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 238357 8298789 ~ 8302245 (-)
G110544 NA other downstream 324007 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 448147 8082900 ~ 8092455 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 709852 7828215 ~ 7830750 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 89073 8633350 ~ 8636222 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 601653 9145930 ~ 9152183 (-)
G110974 NA other upstream 726694 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1332934 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 2201299 10745576 ~ 10764305 (-)

Expression


Co-expression Network