G10893


Basic Information

Item Value
gene id G10893
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16559215 ~ 16559484 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU11997
GTTTGATTGACAAGCGATCTAACCAATCATAACGCCGAATCCGCCATTTTGTCCGACAAAGCAGTCAGGAGTTAGAAGATTAACCTCGGTGGACTTGAACTTGAAAAATGGTGTGTACTGATGTCTTTCCGCGTTTGAAACAACATTCCTTCTCATGTTCATTCATGTTTATTTGATGCTATAAATTAACTAGTAGGAAGAGATGATCGGTTCACGAGCCGCTTGAGCTGAGGCGCTACAGCAATCTGTCACGAAACATTAAGGAGCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11997 True 270 lncRNA 0.42 1 16559215 16559484

Neighbor

gene id symbol gene type direction distance location
CI01000000_16468276_16479177 NA coding upstream 78156 16467489 ~ 16481059 (+)
CI01000000_16375958_16382103 G3BP1 coding upstream 176657 16373958 ~ 16382558 (+)
CI01000000_16362843_16368520 SPARC coding upstream 190695 16362691 ~ 16368520 (+)
CI01000000_16339900_16340277 ATOX1 coding upstream 218834 16339900 ~ 16340381 (+)
CI01000000_16282545_16293288 MTNR1AL coding upstream 264550 16282126 ~ 16294665 (+)
CI01000000_16573665_16580545 SLC25A48 coding downstream 14181 16573665 ~ 16580958 (+)
CI01000000_16611284_16612778 CPLX2, CPLX1 coding downstream 51800 16611284 ~ 16613885 (+)
CI01000000_16676128_16679215 SLC26A2 coding downstream 116552 16676036 ~ 16679240 (+)
CI01000000_16781396_16802242 HTR4 coding downstream 221912 16781396 ~ 16802418 (+)
CI01000000_16835058_16848950 NA coding downstream 275436 16834920 ~ 16849092 (+)
G10891 NA non-coding upstream 2719 16556126 ~ 16556496 (+)
G10879 NA non-coding upstream 23238 16535631 ~ 16535977 (+)
G10878 NA non-coding upstream 23693 16535268 ~ 16535522 (+)
G10869 NA non-coding upstream 34430 16524585 ~ 16524785 (+)
G10380 NA non-coding upstream 132040 16423358 ~ 16427175 (+)
G10903 NA non-coding downstream 21828 16581312 ~ 16584118 (+)
G10911 NA non-coding downstream 66524 16626008 ~ 16626492 (+)
G10912 NA non-coding downstream 67469 16626953 ~ 16627308 (+)
G10956 NA non-coding downstream 131778 16691262 ~ 16691550 (+)
G10968 NA non-coding downstream 177548 16737032 ~ 16737247 (+)
G10201 NA other upstream 628653 15930266 ~ 15930562 (+)
G9201 NA other upstream 2324274 14215024 ~ 14234941 (+)
G7522 NA other upstream 4380207 12178369 ~ 12179008 (+)
G7514 NA other upstream 4422207 12136522 ~ 12137008 (+)
G7153 NA other upstream 5313582 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 779670 17339154 ~ 17346200 (+)
G11465 NA other downstream 1324469 17883953 ~ 17887462 (+)
G11521 NA other downstream 1473255 18032739 ~ 18164112 (+)
G11801 NA other downstream 2121383 18674116 ~ 18745376 (+)

Expression


Co-expression Network