G10903


Basic Information

Item Value
gene id G10903
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16581312 ~ 16584118 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU12014
TTAAACAATAAACATTTATTAAATTGCTTATTAATAAATGATCACCTTTTGATTATTATTGTTGCCTCTAGTAATTATGTGTCTGATTTTTAATTTCCAACCTATTTAGGGTTCATTTTAAGCCAGACATATAGTCATTTTTAAACAATAGTTGTGTTAAATAAAACCACCCAGCACATTGGGCAAACATTTAACCAAACCGCTGGATTAAAACAACCAAATCCCAATCAACTTGGGATGTTTTTAACCCAGAATTTTTTAGAGTGTAGCCTATATCACAAAATGCTTGTTTGAAAACTTTGTCACCTATTGTTGAGTTCATGTCCTTGAAAACAATTTTAATACATCATATCCTTTTTTACTCAACCTCCACTATCCTCTTATCTAATTGTTATGCACTCTAAAATCTTGGGTTATATTTTTCTACCCAAGTCCTGGGTTGAGCCTTGGGTCATTTTTTGGGTTATTTTTCCAGTGTTTGGTTAGCTTTTGTGTTACCCAGCTCCTGGGTCAGAAATAATAACCCAGTGTTTGGTTAGTTTTTGTTTTACCCAGATCCTGGGTCAGACATAACAACCCAGGGGTTATTTATCACGGGTTTTCTGTGACCTCTTCAGGAGAGAGCAGTGCAGCTCCGTCAAATTGGTGCATGTCTTCGGTAAAATACAGGTTTGTGTACGTTTTATTTTATCTAAAAATTTGTTATTGTTCTGTATATCGTTTCATTTTATGCAAAGCAACATACAGGGGCGCGATGTGAGTCACCTAAACGAGTGTCCCGTCGGTCTTTTCGCATGATGGAAACGCCTAAATAAAATGTTATGATTTTATTAAAAAAAGATACAGAATATAAATACTTAGGATGTTAAAATATGTTCTCAGAATTGTACACTGATTATTTATGGACAGGTTATGGAGTCAGTCATTAGCATTTTTCGGCTACGAGTGAAACGCAGGCGGCGGCCTGAAGTTAGCAGTTCCCCCGCCAAACGCGAGCCATCTCCGGCACGAGATCCAGCGCCGTTACGGTAGAAACAGGGCAACATAAACTGGTCGATTACTCTTGAATTACTTATAAATGTTTCATTTTTACTTATACTATTTGTTAAATGAGCTTAAATGTTGGCAATATGTATTAAAAACAATATAAAATATGCTATACTATAAAATATAATCGAAAATAAAGGAATTATCATGCAAACCAGTGGTTGAGTATTTAAAAAAAAAAAAGTTTAGAGGATTTAGATTAATCCGTAAACATTAATTCATGTCTGAAGTAAAAAAAAAAACTAAGCTAGTATTATAGTAATCAACCCATTATGCTGGGTTAAATAAACAACCCAATTTGCTGGGTAAAACTGACCCAACACGTGTTCTATCCTGTATTTACCCAGCCCTAAATAATATAAATAAATAAAAATATATAAATTGTCCTTATAATAATTTGTATTGTTGCTTCTGATTCACTAGGTGGCGCTGTTTCATTATTTCAGAAAAGTCAGTAGTTGCATGAAAAAACATGTTTCCACCAGATGGTGACACTGAAGCAATAAACCTTTTCTGATAAGCATTGCTGAGGGGTCATCAGTATGTCTGAATAATTACAAGCCTTATTCAAAAACTAAATGATTTCCACTGAAAATAAGCTGCAATGTCTATGGCACTGCAGGGAAAATATTCTCATTTACATAGCTACAGGTAATAGCAGTCAATTGATTATTTATAAAACATTTTGACCTAAATAATGTTTCAGTCACATTTAAACAGCTTGTTTTAAACATGACCTAACCTTTTTTTTTTTTTTTTTTAGCACAGCCTCAGATTTCTCGTATAGCAGTCTCCTTTTGTGTACAGCCAGTGGAGTGATAGATGAGGTTTAAGTGAAAACAGCTGAGGACACAGGCAGCGTCCAAAGCGCCAGCCTGCATTGTGTCAACCTCACTGCAGCTGAATGGCCTCTGCCAAACTCCACCTCCACTGAAAACCAATGCTGCCTTTCCCTAGAAGCCACAAGCAAAACAGCATAAGTCCAAGTCAATTAAGGCAGAAAGATGCTGCCAAAAACCCTTTTAGTAGTGCTCCAGTAATTATATGCTATAGACTGCATTAATAATCCTCAAATGACATTCTGATTGTATATTATGTCTGTTTTAAATCCATCCATGTTCATCAAATGCATCATTGTTTGGCTTTAGTTGTGTACATACTAAAGTTTAATGTACCAAAAAAGTAATTCTTAAGTGTTACTATTCTGAGAATTAAAAAAAAAAGCAAAAACAGATGGAATAATGATAACAGCAGCAATTAAAAATAGCTCTAGACAGACAGCAACTTATGTTTTGAAATATTTCTATCTTCAGATTAAGTGATGACTCAGATGTGGGGGCTCCATATGCAGCAGAGATTTGATCTATTATTGTTTATCTTATTAACTTATTTGCCTGCATGAATATTGACAACTTCACATGTCACTGAATTCCGGACTGCGTGAAACAGCCTAATGATGATGGATGACCTGCTCATCACAATCAGCTGCATAATACCTATTCTTTTTCCAGGCTTCAGTACAAAGAGGTGATGTGTGTGTGCTTGAGACATCAGACCATCATGTCATAAAAAATAGCATTTTCTATTGTGACTGATATATATATAGTGAGCACACAAAGTCCAGCTCCAAAGCAATACGTTGCATGTTACTAACAGGTTCCCTGGTGAGATATGCTGCTTGTGGTTGTTTGGGCTGTTCATGCACGTCATGAATAATGTGTTATTGCCCATTTGTTGTTGAGTGAAAAAAGATGTGTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12014 True 2807 lncRNA 0.41 1 16581312 16584118

Neighbor

gene id symbol gene type direction distance location
CI01000000_16573665_16580545 SLC25A48 coding upstream 354 16573665 ~ 16580958 (+)
CI01000000_16468276_16479177 NA coding upstream 100253 16467489 ~ 16481059 (+)
CI01000000_16375958_16382103 G3BP1 coding upstream 198754 16373958 ~ 16382558 (+)
CI01000000_16362843_16368520 SPARC coding upstream 212792 16362691 ~ 16368520 (+)
CI01000000_16339900_16340277 ATOX1 coding upstream 240931 16339900 ~ 16340381 (+)
CI01000000_16611284_16612778 CPLX2, CPLX1 coding downstream 27166 16611284 ~ 16613885 (+)
CI01000000_16676128_16679215 SLC26A2 coding downstream 91918 16676036 ~ 16679240 (+)
CI01000000_16781396_16802242 HTR4 coding downstream 197278 16781396 ~ 16802418 (+)
CI01000000_16835058_16848950 NA coding downstream 250802 16834920 ~ 16849092 (+)
CI01000000_16861880_16863508 NA coding downstream 276325 16860443 ~ 16863777 (+)
G10893 NA non-coding upstream 21828 16559215 ~ 16559484 (+)
G10891 NA non-coding upstream 24816 16556126 ~ 16556496 (+)
G10879 NA non-coding upstream 45335 16535631 ~ 16535977 (+)
G10878 NA non-coding upstream 45790 16535268 ~ 16535522 (+)
G10869 NA non-coding upstream 56527 16524585 ~ 16524785 (+)
G10911 NA non-coding downstream 41890 16626008 ~ 16626492 (+)
G10912 NA non-coding downstream 42835 16626953 ~ 16627308 (+)
G10956 NA non-coding downstream 107144 16691262 ~ 16691550 (+)
G10968 NA non-coding downstream 152914 16737032 ~ 16737247 (+)
G10937 NA non-coding downstream 317812 16901930 ~ 16902606 (+)
G10201 NA other upstream 650750 15930266 ~ 15930562 (+)
G9201 NA other upstream 2346371 14215024 ~ 14234941 (+)
G7522 NA other upstream 4402304 12178369 ~ 12179008 (+)
G7514 NA other upstream 4444304 12136522 ~ 12137008 (+)
G7153 NA other upstream 5335679 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 755036 17339154 ~ 17346200 (+)
G11465 NA other downstream 1299835 17883953 ~ 17887462 (+)
G11521 NA other downstream 1448621 18032739 ~ 18164112 (+)
G11801 NA other downstream 2096749 18674116 ~ 18745376 (+)

Expression


Co-expression Network