alg2 (alg2,LOC107706186,LOC107595974,LOC107723517,LOC107687815)


Basic Information

Item Value
gene id alg2
gene name alg2,LOC107706186,LOC107595974,LOC107723517,LOC107687815
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16817726 ~ 16820755 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261774.1
ATGTCGTTTGGAAAAACTTAAAGGCGGTTCAACTCAGTGCAGTGACGCGTCATGTGCGATGGATGATGTGTACGGAGTAGGGCAGACATTTTGGCTCAATCGGGAAGCCGGTTTCACTAAATCGCGAACTTTGAGCCATATTTCATCATtcatacagacagacagcagagtTAGTGTCACTAAACCTACGAGTACAGGCTCTGGTCGAGACAGGATGGTTCGGGTGGTGTTCCTGCACCCTGATCTGGGTATCGGTGGAGCCGAGCGTCTGGTGGTGGATGCAGCTGTAGCTCTGCGCTCTCGTGGATGCAACGTTCAGATCTGGACGGCACACTATGACCCCCAGCACTGCTTCTCGGAGACGCTTTCACCTGACTTGCctgtggtgtgtgtgggtgaCTGGCTGCCCACCAGCATGTTCGGTTATTTCCATGCTCTCTGTGCATACCTGCGCATGATCTATGTAACTCTCTATCTTGTGCTCTTTAGTGGGGAGGAGTTCGATGTTGTCTTCTGTGATCAGGTTTCAGCATGTATTCCCTTTTTGCGTTTGGCACACCGCAGAAAGAAAGTCTTATTCTACTGTCATTTCCCTGACCAATTACTGACTCAGCGCCGATCGGCTCTGAAGCGCATGTATCGTGGCCCCATCGACTGGTTCGAGGAACTGACCACAGGCATGGCCGACCGCATTTTGGTCAACAGCCAGTTCACTGCGGGAGTCTTTAAACAGACGTTCCCCAAACTGGCTGAGATTCAAACCGATGTCCTTTATCCCTCTCTGAACTCGTCAGCTTTCGATGATGAAGTAGAGGGCCTCGGCGGGCTGCTCCCTGAGGGGCGGAGCCTCAGCTTTCTGTCAATCAACCGCTTTGAACGCAAAAAGAACCTGCCGTTGGCGCTGCAAGCGTTGGCGAGCCTGAAAGAGCGTCTTCCGGCGGAGGAATGGGAGCGCTTGCACCTCGTGATGGCGGGGGGTTATGACGAGCGTGTGGTTGAGAATGTAGAGCACTATGAGGAGCTGCGCTCACTAGCAGCCTCTCTAGGCCTGGAGGACCACGTCACCTTCCTGCGCTCCTTCTCAGACAAACAGAAACTGTCTTTGCTGCACAGCTGCACTTGTGTACTGTACACTCCAAGCAATGAACATTTTGGCATCGTACCCATTGAGGCCATGTATTCACGTTGCCCAGTTATTGCAGTCAATTCAGGAGGACCACTAGAGTCTGTAGCCCATGGAAAAACAGGCTTCCTTTGCGAACCCACCCCTGAGTGCTTCTCTGAAGCTATGCAGAAGTTCGTTGCAGACCCTAAACTCAAGCAGCGCATGGGACAGGCTGGAAGAGAGCGGGTACAGCAGCGGTTCTCACTGCAGGCCTTCACCGAGCAGCTCTACGGTCACATCATAAACCTTACCCAATAACCAATTTTGACATCATAAAGGCCATTTGGCTTCGGATCAGCACACATTCTGCCAGCCCGGTTGCCATGGTGGGACTAATGAAAGTATGTCATCTCTAATGAAAGAAAAGAGCAGTGGGAGTTAACATGGCTTAAGAGTTCAATGCAAGCCTTGAAGAATGTGGAGCACTCGTCCGACCGAGAGGTTAATGAATTATTGCTCACCAGCCACATTGATCAAGCGCGTCTCGGCGAGGCCTGAGGACTATacgtgtgtatatttttttatgccaaagGCCTATTAGAGAGTTTCTCGGGCAGAAATCGATAGAGAAGTTTTCAGTGCCCTGCTCTGTTGGCCAGTGTCTCTGCTTTTGTTTAGTGATAACAATGGAGGGTGTTAAAGAGTTATTAAAGTCTCAAACTAAAGATGTTTGTTTgagtagaaaaagaaaaaagttttcctAGGACACTGAAGGTCATATGCTGTATTGGGTTTGAGGTTGTTACTGTCTGTGTATCTCCTCATGCTATTGATACGAGACCAAAACCCTGATTAAATGAGATGTTGCTTCGC

Function

symbol description
alg2 Predicted to enable alpha-1,3-mannosyltransferase activity and glycolipid mannosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein glycosylation in endoplasmic reticulum. Predicted to act upstream of or within protein glycosylation. Located in nucleus. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ii and congenital myasthenic syndrome 14. Orthologous to human ALG2 (ALG2 alpha-1,3/1,6-mannosyltransferase).

NR:

description
alpha-1,3/1,6-mannosyltransferase ALG2

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0097502 mannosylation biological_process
GO:0005634 nucleus cellular_component
GO:0033164 glycolipid 6-alpha-mannosyltransferase activity molecular_function
GO:0004378 GDP-Man molecular_function

KEGG:

id description
K03843 ALG2; alpha-1,3/alpha-1,6-mannosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261774.1 True 1978 mRNA 0.50 3 16817726 16820755

Neighbor

gene id symbol gene type direction distance location
LOC122360322 frrs1l,LOC107595962,LOC107657722,LOC107723406,LOC107593684 coding downstream 13619 16799360 ~ 16804107 (-)
tmem245 LOC107687814,LOC107595951,LOC107706205,LOC107723436,LOC107657721,LOC107593683 coding downstream 18526 16784020 ~ 16799200 (-)
ino80c ino80c,LOC107706244,LOC107723410,LOC107657632,LOC107596621,LOC107593731 coding downstream 118877 16697321 ~ 16698849 (-)
pdp1 pdp1,LOC107706250,LOC107595893,LOC107687812,LOC107593682,LOC107723551 coding downstream 124598 16688215 ~ 16693128 (-)
rnf41l rnf41l,LOC107687809,LOC107723454,LOC107593678,LOC108443277 coding downstream 167413 16646546 ~ 16650313 (-)
erp44 erp44,LOC107706132,LOC107593692,LOC107723539,LOC107596038 coding upstream 94763 16915518 ~ 16928686 (-)
tex10 tex10,LOC107657731,LOC107723457,LOC107706105,LOC107596045,LOC107593696,LOC107689903 coding upstream 130424 16951179 ~ 16968820 (-)
rbm12ba LOC107706078,LOC107596631,LOC107689919,LOC107657732,LOC107723523,LOC107593697 coding upstream 158017 16978772 ~ 16981410 (-)
trnat-ugu_49 NA coding upstream 169547 16990302 ~ 16990374 (-)
nacad LOC107706031,LOC107689890,LOC107593698,LOC107723474,LOC107657733,LOC107596337 coding upstream 189621 17010376 ~ 17022578 (-)
LOC122360493 NA non-coding downstream 80444 16724418 ~ 16737282 (-)
G113473 NA non-coding downstream 123436 16693930 ~ 16694290 (-)
G113470 cdh17,LOC107595837,LOC107706528,LOC107687825 non-coding downstream 137614 16679684 ~ 16680112 (-)
G113439 epb41l4b,LOC107706320,LOC107687806,LOC107596310 non-coding downstream 210046 16606714 ~ 16607680 (-)
G113433 NA non-coding downstream 228112 16588685 ~ 16589614 (-)
G113504 NA non-coding upstream 875 16821630 ~ 16822180 (-)
G113569 LOC107706170,LOC107657725,LOC107593690,LOC107723503 non-coding upstream 67566 16888321 ~ 16892578 (-)
G113567 nr4a3,LOC107687818,LOC107706170,LOC107723503 non-coding upstream 73597 16894352 ~ 16895923 (-)
G113587 NA non-coding upstream 89580 16910335 ~ 16911882 (-)
G113588 NA non-coding upstream 92905 16913660 ~ 16913962 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other downstream 135548 16586084 ~ 16682178 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 578220 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 589260 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 676491 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 803975 16012964 ~ 16013751 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 991615 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1374716 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 1536662 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 1671871 18492626 ~ 18520287 (-)
G114236 LOC101883708,LOC105900568,LOC106574835 other upstream 1828764 18649519 ~ 18650609 (-)

Expression


Co-expression Network