fam110d (si:ch211-107n13.1,LOC107688188,LOC107707635,LOC107726719,LOC107564093,LOC107552531,LOC107671482)


Basic Information

Item Value
gene id fam110d
gene name si:ch211-107n13.1,LOC107688188,LOC107707635,LOC107726719,LOC107564093,LOC107552531,LOC107671482
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 26299517 ~ 26314845 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261794.1
GGTTTACACCCGTACCTGCCCGCCCACCGCAGTGGGACGATCCCGGTGCATCCACGAGCCGAGCGCTCCTCCGGCGCCCAGCTCACACACCACCGAGATTACCGGAGCTTGCACGCGCGGACACGGAGCGCGACACGCGgGCTCCAGGTACAGAACGAGAAGGACTGGACCTCTGTCTATCAAACTCTGAAGTGCCCCGGTGCCAGCTGTATAGGTCAACCCAACCGTAACGCCACAGGACAATAGAAGCCCAACCCAGAGACGGCTATCAAAAAGCAAATAATCAAGCTCATTAGCTCTCTTCCCCCCCTAGATGACCTCCTCTGAAAAGATCAACAGAAGAAAGGAACTAAACGAGGAGGAAAGAAATGCACTGGCAGCTATTTCTGATGCTCTGTGGTGAAGAGAACATCTCATTTGGGATTTAAGGATTGCGGAAAAAGGATTTCCCCATGCCCTGCCCATTTATCCCAATGcctatataaatattgcatggAGATATCAAATCGTCCCTTTTCCAAAGAGcctaattataacaaaaatctCCAGTCTGTTGCCTAAACCTCCTAGATTCTCAGAATGCCTAAATATCTATATTCATAGGGGTCCTATATTTGGATCCCTAAAATTTTGAAACACCTCAGATCTCAAAGAAGGATCAAACTGGTGGTTTGCAAGTTCCTTGTCTGTTTTTGGGCAAGGCAGCTGCTTTGTCCTTTCTATTTGGATGCATTTTACTCCAAAATGAAGCCTTTAACTCCCATTGGTTCACCTTCTCCGCTGCGGCTCCTGAACAAGGGGCCTGATTACCTGCGCAGGCAGATGGATGCCGGAAGCAGGGGTCGTTCCGTCAGTGCCGTAGAGCGACTGGAAGCCGACAAGGCAAAGTACGTCAAGAGTCAACAGGTCATCAATACAAAGCAGGAGCCTGTGTTAGTTCCTTGTGCGACTCCTCCACCGGTGCCCCGTCGCAACTTTACAGTGTCTACTCCTTCAACGCCCGTTCTCCCGGCTCGGAATCAAACGGTGCCTTTCTCTGCACCACTGCTCTCTCGGGACGAAAACGAGGACGACTCCAGGAAAGAGAACTGTCGGAACGAAACCGATGTGGAAACCAAGAACCGCAACAACACAAACAAGCCTCCCGCACATTCTCCAAGAACTCCAACCATTGCTCCATTAGTTGCTCCGCATAGTGCGCCGATAATGCGCAGGAGCAACGGCAAACGCATGCTGCGTCCAGACTCCCTGGTTATTTACCGACAGAAGAAAGAGTGCAAGAGTGCCAGCGGAGGTGGAGAAAATGCGAACTTAGAGGTCAAGGGATACAGCTTCGTACGACGGCTCTTCCAGGGATCCATGCGCGAAAAGAGCGGTGGGAATGAGGCTCAAAAAATGGTGATAAGCGAGGAGAAGGCTGCTTCTTCTCGAGACGGGGATTCACGGATGTCCTGGTCCAATGATAAAGACACAGTCGACGGTGGGAATGAGACAAGGCGATCAAGCAAATCCGAGCGAGAACATTCGATGCACGAGACGCAAAACGATAACACTGGTTTTCAGGAGAAGCAATCGAAGAACTGCATGATCAACTGCATGACCAACAATAACGACATGGACCCATGGAAGCCAGTTGTTCCTCAGATGCGGTCCGATTTGAAACGCTCCAAGTCAGAATTGCGACTACGCTGCTCGCTAGCCATGTCCGAGCAGGAACGCTTCTTTGACTACTGTGGACTGGACCTGGATATGGTGGAAAGGCTCGGACCGGAGAACTTTCTGAATGGTGCCAGTTCAGTTGACACGCTCTCGCTGCTACTGAGGAGCGTCGGAGGCGGGGGCTCGGAGCCCAGCGAGTTTTCCCGACACTCCGGAGAAGGGATTTTTCAGGAAGAGCTTGCCGAGCAGATCCCTACAGGTGTGTCTATTATCGAGAGAAATGCACGGGTCATAAAGTGGCTCTACGGTTGCAGGAACGCAGCCCAGGAGGGTCCTAAAGAGTCTACTGTTTGATTATCACGGTAACTAAACCCGAGACTTTCTGGAGCCGTGTTCCAATATGAAAAActatgctgtatttatttcacacaAGACGTTGTATTTAAGAGATTTGTTTGGCTCTTCACAACCAGTACGAGAACATATGTGTTATTTTGTGTAAGTCACATATGAAGCTGACACTTCCTTGATTTCATGACCTACACTGTGGCTTTGTCGAAATCGCCCCCTATACCCTCATTCACTATTCCCAACATTAGTTTACTAATATAGTCCACTCGAAGGAGTGGATGAAAACaaatggttacactttattttgatagttcaTTTTAGACAGTCTGCTAACTATATGTAACTTTGTAACTGCATGTCAACTACACGCcaaagattaatttttattttgcaactacatgtccactaactctcagagtagactgttaggtttagggttagtggAATAAGTTggcatatacttgcaaagtttccacccatcaaaataaagtgttagaagttatATAGTCTACTACttctctaatgactgctagcaGGCATGCAGTGgtaaagttacttactgttagtaaaatgtctaaacTGGACTATcaaaagaaagtgttaccaaacaaaTGAGTGAATTTGGAAACCAAATGCGGTTGTGGACTAACGAGACCCAGATATTCATTTGCCACATTACTTACATTGCATGGCTCTAGCAGTCTGTACGCTTATTATTACGGTGCATTACGGGATTGATTGAGTGCACTCAATAATGTCCACTACGGTTTCAGACGAGTGTACTATAGAGTGTAGGGGGCGATAATGATGTATATTAAGCAATGTCATCTCCTACTCTCTGTAAATAGAAATAATCATGAGTCCGTCCTGTTACGAGCGTTATTTGTTGAGTGTAACTTAAAGAAGTGTCATCggattaataatttaacattgaaAACCACTAAGCTTTTTCTCTGGGGCTGGGAAACCGATGCATGAGTGTTAAATGAACCATGTGTACCTCATTTCCCAACCGTCCcagtttagtttgtgtgttGCCTCTTTTCCTTAAACGCAGGCGTtggaacaaacacacagaggacCCCTGTGGGGATATTAATGCACTGAATTGGAGAAGGAGCGAGAGCTATATATACTGCTATGAAACGTATTTTTAACACTGagtgtatgcaaagaaaaaagcaGGGCCTTAAAAAACAACCTGATTTTGAGATTTATTAACGTATGCCAAAGAAATGTGCTGTGTACTGATACGATGCGCTCCAAACCCTATCGAGCTGCCTTGAGAGAATGACGTTCAAAGAGTTTGATATTAGCATTTTGCTAAGCTAATAACTTGAGAAACATTGGCtgaaaactgcatgtttttagtaatatttttactaaatattagtGTTGGGAAGGGTACTGTAATAGATACAAATGTAATAGATTACAAGTTACCCCATGTAAAATCTAGtttattttgattacattttaaagtaatgcaACTGGTTACATTGAATTACTTTTTGACGTTTGATTACTTCTGTAATTTTCTAATttataacaaaatgttttcaatcattttgaaacatttatagCAGACAACACCGATTAGTCAAAATATATCTTCACTAGAATTAAAGCGATAGTTTAACTTTAAAGCACAGCCAtcacaaaaatctgaaataaagcGTATAGATGAACCcaaataggaaataaaaaagttatcAAATAAGTATGTGTCCTATTCTGTCTCATTGGTGTATTTTAGAGCAGTCAATGCATTCTGGCAAAGAAATCAATCAGACCTCtatgtgtgtgaaaatattcataACTCTAATTGTCAATTTACTCATTAACtaacaaatttaatttacatgtattttgtaattaaattacgtAATCGCTTTACATTTAACCACTGCCTCCCCAACACTACATATATTTTTCCCTGTGCATTTTAGAATTGCCTTTTTAGCAAAGGATGCACGTGCAAATTTGATTTGGGCCAAAATCCTGTCGTACACGGTATCACGACTGTGCTCCAAGCAGCAAATATCAATGTCTGAAAGGGGACCAAAAGTAAAATTTGGTAGCCGCTCACTAGGGTTTGGAACAACCATTCGTCTTCCCCCCCAACTGTTTTTCACAAATGCCTACAAACGGGCCGTTTTCATTTCCACACTGCATCTGCACCACAAGCATTCTTCAGCACGCGCTTGATCTCGCTGTTTCTGTCTTTAACTCACAAAAGCTCAGCATTTAGCGAAGTAGAAGAAGACGTAACAGTGAGACCCTGCGGGGCAGACGCGCTCCCAGTGCGTTTTCGTGTTGAAGGAGACCCTTGAAAACCGAAAAACCATCTGAACTCATCAATCAGACACAGATTCTTCTTTGTCGTAATGAAGCCCCGGTCAGAGGCATTAATCAGTCTCTATGATACCACTGATAAATGAAGCAAAATTTGCCGTGGCGTGAAAAAGAACTGTGTTTCATCCCCAACGTCCAAGATGCATTCAGTCTTCCGGAGCGCCTGAAATCTTTCCTTCTTCTTGCATGTTTACAGTCTACCTGCATATGTTTCTATAAACaagaattttacatttcaacccaaagagatattacagaaaaagtcCTAATAAAATCCTATTTCTGAA

Function

NR:

description
PREDICTED: protein FAM110D

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261794.1 True 4652 mRNA 0.43 2 26299517 26314845

Neighbor

gene id symbol gene type direction distance location
LOC122360092 LOC107688189,LOC107564095,LOC107707648,LOC107671448,LOC107552527,LOC107726716,LOC107552528,LOC107671449 coding downstream 25826 26270993 ~ 26273691 (-)
LOC122360606 LOC107552511,LOC107671451,LOC107707651,LOC107688191,LOC107552530 coding downstream 29372 26267933 ~ 26270145 (-)
LOC122360603 LOC107707651,LOC107688191,LOC107552530,LOC107552511,LOC107671451,LOC107564104 coding downstream 32168 26264744 ~ 26267349 (-)
LOC122360602 LOC107726716,LOC107707650,LOC107552528,LOC107688189,LOC107564095,LOC107707648,LOC107552525,LOC107671450 coding downstream 35884 26259976 ~ 26263633 (-)
LOC122360605 LOC107688191,LOC107707651,LOC107552511,LOC107552530,LOC107671451,LOC107564104 coding downstream 47658 26250092 ~ 26251859 (-)
ubr5 ubr5,LOC107677650,LOC107659085 coding upstream 507312 26822157 ~ 26868971 (-)
LOC122360494 LOC107677651,LOC107565755,LOC107729815,LOC107601969 coding upstream 563826 26878671 ~ 26888899 (-)
LOC122361111 atp6v1c1a,atp6v1c1,LOC107601989,LOC107729816,LOC107659089,LOC107565754,LOC107724997 coding upstream 642796 26957641 ~ 26969940 (-)
LOC122361113 NA coding upstream 760659 27075504 ~ 27078615 (-)
spire1b spire1,LOC107565753,LOC107677663,LOC107601988,LOC107659090 coding upstream 865792 27180637 ~ 27204293 (-)
G116368 NA non-coding downstream 16660 26105017 ~ 26282857 (-)
G116360 NA non-coding downstream 168711 26130280 ~ 26130806 (-)
G116359 NA non-coding downstream 170891 26071160 ~ 26128626 (-)
G116351 NA non-coding downstream 226511 26020525 ~ 26073006 (-)
G116350 NA non-coding downstream 229983 26062291 ~ 26069534 (-)
G116611 NA non-coding upstream 70953 26385798 ~ 26386007 (-)
G116633 NA non-coding upstream 305445 26620290 ~ 26678901 (-)
G116638 NA non-coding upstream 358079 26672924 ~ 26673379 (-)
G116647 NA non-coding upstream 424260 26739105 ~ 26739861 (-)
G116648 NA non-coding upstream 426731 26741576 ~ 26743789 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other downstream 588831 25664719 ~ 25710686 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other downstream 1826152 24414226 ~ 24473365 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other downstream 1929951 24364640 ~ 24369566 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other downstream 1959729 24317482 ~ 24339788 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 2624172 23668065 ~ 23675345 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 64827 26379672 ~ 26384187 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other upstream 106873 26421718 ~ 26507052 (-)
G116654 myom3,LOC107659064,LOC107729819 other upstream 492275 26807120 ~ 26809146 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other upstream 495472 26810317 ~ 26812974 (-)
G116668 NA other upstream 559553 26874398 ~ 26876610 (-)

Expression


Co-expression Network