dek (dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821)


Basic Information

Item Value
gene id dek
gene name dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21139170 ~ 21146077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261887.1
GCACCTCCGTCGCGACCAATTGGCAGCAACACTAACGTACAACGGCGGGACTTGCTGCGATTTGCTGCAAAGGGTGCAATTGAGAACCTAATCATACAGTACAGAAATGGAAGCTGTCAAGACAGAGGATCTTCCTTTGGATGGAAAGCCGGTAAAAAAGGGAGAGGAGGAtgacaagaagaaaaagaagagtcCATCTGATGATACGGAGCAGGATGAATCAGAAGAACCTAAACCTAAAAGCAGGTCTAAACCCAAATTGTTTGAACCTGAAATTCTTGAAGGAAAACGGGAGAAAAAAATTATCCAGAGACTTGATTTGATGAGCAAACCGAAGGAAAAGCCAAAGATTGAGAGCATAGGAGAAGGTGCCAAACTGGGAGACATTGTACGGATTAATCACTCCATCGGAAAGCTCAAAGCGCCTCTCCTCAAACCTCTGCATAAGATAGTTTATGATCGGCCAGGAACTGCATCAACACTACGAAAAAACCTTAGGCTGTTTAATGGATTTCCTTTTGGGGAGGAAAGTGAcctttacaacaaaaaaatggagAAGGTGAAAAGgCTTCACAAGGAACAACTCAAAACCATTTGTCAAACTCTTGATCTGGAGAGGTCTGGAACGCAGATTGTTCTTTCAGAAAGGATCATGAAATTTCTTGTACATCCAACCAACTCAGGAAAGCCTATcctaaagaagaaaaagaagacaaCCAAAGATGCCAAAAGAGAAAAGTCTTCatccaaaagtaaaaaaacacagaaaaaggtAGAAAGTGGGAAGTCCAAACCCATTGTCACTGATTCCAgtagtgatgatgatgacgacgacgatgatgaaGAGGGTAAAGAGAACAATAAAGACGCTGAGAAGTCTGTGacggcaattaaaaaaaataaagacactgGAGATAAATCATGTGATAAagaggaagatgatgaagacGAGGAGGACGACGACgaggaagatgatgaagacGAGGAGGACGAGGATGCTCCTGAAGAGGAAAGCAAGAAGGAAGAACAGAAAACTTCTCAGAAGAAATCTGCAAACATGAAATCCACAAAGAAATCTGAGAAGTCAGAACAGACCGCTTCAGATGAAAGTGACCAAGACGTTCATGAAGACAAGAATGCAAAAAAGACAAAAAAGCCTGCAGCAAAGAGGAAAGCTTCAGCAAAACCTGTGCCTAAAACAAAGAAAGCCGACAGCAGCAGCAACCGAGGGAAGAAGAAAGCCAGCAAGAGCAAGGATGAAAGTGAAAgctctgatgatgatgatcagcCGTTGataaagatgattaaaaaacCACCGACTGAGGAACAGCTGAAGGAGGCAATCAAAGATCTATTGAAAGATGCCAACTTGGAGGAAGTTACAATGAAGCAGATCACCCGACAAGTTTATGACAAGTATCCTGATTTTGATCTGACCAGCAGAAAGGAATTCATCAAGGAAACAGTTAAAGGTttgTTATCCTGAAGTAAAGAAAATGCCTTATTTAAAAGGACAGCGAGGGTGAAGGTCCTGTGGACAACTGGATTTTCATTGCACTGTTCACTGTTGTgtagtttctttttattattttatataagttttCAACTTTCAagtaaattctgtttttatgtattttaaagtattttctaaaaatgtacattttcacgTTTGACAGTAAATAATCTGGATGGTTTTGGTTGCTGAAATATGCCACATTTCCGAAGCGAACCTTTCCCCTCTTATTTTAATGGCACATAGTCATATTGCATTTTGACAGTCACATGTGAATTTTTTGGCTGTGTCTTTAAGACCTACAAGTTACCATGTCCTGCAGCTGCATTATCGTTGACATGGTACTGCCAAGATGTTATATGCAATATTTAGGAAGATTTGATTGGTTTCAACTGTTATTAGTGCCGAGTTTTATTTCTAAGGTCctaaatgctaaatgaaaagaaactttTGGACAGATTatgtatttcattataaaacattcagaagtgttaaggttaaggttaagtgAATATTCAATTTCAGTGTTGGCTTAACAGGAATTTGGGATTTTAATACTAATttgtaaaaagcaaaaagcattgatttttttttttatgattcatttttgtaaatatgccttttatgtatttttttccttattttattttgaatttttaaatacaagtcCTAAGGAACAAATATCTTAAGTCTGAGATGTTACTCATACCTGCAGGTCAGTGTTGTAGATTAGGTTTTCTTATAAGACATGAGTTAAGGTTGATCTGTTGTATACGCTGACCTCAGTAACCAGTTTATCAGTTATCATCAGTCATATTGCTCATAACGTGTCAGAaactacaaaatgaaaatgtgcgtttattttgtaataaattgaTTTTTCATAGAAAATA
>XM_043261888.1
CCCGCCCTCTCTTTTCAAACGCCATGTTTACTGCGCACCTCCGTCGCGACCAATTGGCAGCAACACTAACGTACAGGTGCAATTGAGAACCTAATCATACAGTACAGAAATGGAAGCTGTCAAGACAGAGGATCTTCCTTTGGATGGAAAGCCGGTAAAAAAGGGAGAGGAGGAtgacaagaagaaaaagaagagtcCATCTGATGATACGGAGCAGGATGAATCAGAAGAACCTAAACCTAAAAGCAGGTCTAAACCCAAATTGTTTGAACCTGAAATTCTTGAAGGAAAACGGGAGAAAAAAATTATCCAGAGACTTGATTTGATGAGCAAACCGAAGGAAAAGCCAAAGATTGAGAGCATAGGAGAAGGTGCCAAACTGGGAGACATTGTACGGATTAATCACTCCATCGGAAAGCTCAAAGCGCCTCTCCTCAAACCTCTGCATAAGATAGTTTATGATCGGCCAGGAACTGCATCAACACTACGAAAAAACCTTAGGCTGTTTAATGGATTTCCTTTTGGGGAGGAAAGTGAcctttacaacaaaaaaatggagAAGGTGAAAAGgCTTCACAAGGAACAACTCAAAACCATTTGTCAAACTCTTGATCTGGAGAGGTCTGGAACGCAGATTGTTCTTTCAGAAAGGATCATGAAATTTCTTGTACATCCAACCAACTCAGGAAAGCCTATcctaaagaagaaaaagaagacaaCCAAAGATGCCAAAAGAGAAAAGTCTTCatccaaaagtaaaaaaacacagaaaaaggtAGAAAGTGGGAAGTCCAAACCCATTGTCACTGATTCCAgtagtgatgatgatgacgacgacgatgatgaaGAGGGTAAAGAGAACAATAAAGACGCTGAGAAGTCTGTGacggcaattaaaaaaaataaagacactgGAGATAAATCATGTGATAAagaggaagatgatgaagacGAGGAGGACGACGACgaggaagatgatgaagacGAGGAGGACGAGGATGCTCCTGAAGAGGAAAGCAAGAAGGAAGAACAGAAAACTTCTCAGAAGAAATCTGCAAACATGAAATCCACAAAGAAATCTGAGAAGTCAGAACAGACCGCTTCAGATGAAAGTGACCAAGACGTTCATGAAGACAAGAATGCAAAAAAGACAAAAAAGCCTGCAGCAAAGAGGAAAGCTTCAGCAAAACCTGTGCCTAAAACAAAGAAAGCCGACAGCAGCAGCAACCGAGGGAAGAAGAAAGCCAGCAAGAGCAAGGATGAAAGTGAAAgctctgatgatgatgatcagcCGTTGataaagatgattaaaaaacCACCGACTGAGGAACAGCTGAAGGAGGCAATCAAAGATCTATTGAAAGATGCCAACTTGGAGGAAGTTACAATGAAGCAGATCACCCGACAAGTTTATGACAAGTATCCTGATTTTGATCTGACCAGCAGAAAGGAATTCATCAAGGAAACAGTTAAAGGTttgTTATCCTGAAGTAAAGAAAATGCCTTATTTAAAAGGACAGCGAGGGTGAAGGTCCTGTGGACAACTGGATTTTCATTGCACTGTTCACTGTTGTgtagtttctttttattattttatataagttttCAACTTTCAagtaaattctgtttttatgtattttaaagtattttctaaaaatgtacattttcacgTTTGACAGTAAATAATCTGGATGGTTTTGGTTGCTGAAATATGCCACATTTCCGAAGCGAACCTTTCCCCTCTTATTTTAATGGCACATAGTCATATTGCATTTTGACAGTCACATGTGAATTTTTTGGCTGTGTCTTTAAGACCTACAAGTTACCATGTCCTGCAGCTGCATTATCGTTGACATGGTACTGCCAAGATGTTATATGCAATATTTAGGAAGATTTGATTGGTTTCAACTGTTATTAGTGCCGAGTTTTATTTCTAAGGTCctaaatgctaaatgaaaagaaactttTGGACAGATTatgtatttcattataaaacattcagaagtgttaaggttaaggttaagtgAATATTCAATTTCAGTGTTGGCTTAACAGGAATTTGGGATTTTAATACTAATttgtaaaaagcaaaaagcattgatttttttttttatgattcatttttgtaaatatgccttttatgtatttttttccttattttattttgaatttttaaatacaagtcCTAAGGAACAAATATCTTAAGTCTGAGATGTTACTCATACCTGCAGGTCAGTGTTGTAGATTAGGTTTTCTTATAAGACATGAGTTAAGGTTGATCTGTTGTATACGCTGACCTCAGTAACCAGTTTATCAGTTATCATCAGTCATATTGCTCATAACGTGTCAGAaactacaaaatgaaaatgtgcgtttattttgtaataaattgaTTTTTCATAGAAAATA
>XM_043261889.1
CAACACTAACGTACAGTGAGTATATGTATTAAAGTATGAGCCTGTGAGATTTCTAGAGGTTTTACTGCCTGTAATTCTTTTCCCTAAAATGGATGTTTACGTATAAGACGGCGGGACTTGCTGCGATTTGCTGCAAAGGGTGCAATTGAGAACCTAATCATACAGTACAGAAATGGAAGCTGTCAAGACAGAGGATCTTCCTTTGGATGGAAAGCCGGTAAAAAAGGGAGAGGAGGAtgacaagaagaaaaagaagagtcCATCTGATGATACGGAGCAGGATGAATCAGAAGAACCTAAACCTAAAAGCAGGTCTAAACCCAAATTGTTTGAACCTGAAATTCTTGAAGGAAAACGGGAGAAAAAAATTATCCAGAGACTTGATTTGATGAGCAAACCGAAGGAAAAGCCAAAGATTGAGAGCATAGGAGAAGGTGCCAAACTGGGAGACATTGTACGGATTAATCACTCCATCGGAAAGCTCAAAGCGCCTCTCCTCAAACCTCTGCATAAGATAGTTTATGATCGGCCAGGAACTGCATCAACACTACGAAAAAACCTTAGGCTGTTTAATGGATTTCCTTTTGGGGAGGAAAGTGAcctttacaacaaaaaaatggagAAGGTGAAAAGgCTTCACAAGGAACAACTCAAAACCATTTGTCAAACTCTTGATCTGGAGAGGTCTGGAACGCAGATTGTTCTTTCAGAAAGGATCATGAAATTTCTTGTACATCCAACCAACTCAGGAAAGCCTATcctaaagaagaaaaagaagacaaCCAAAGATGCCAAAAGAGAAAAGTCTTCatccaaaagtaaaaaaacacagaaaaaggtAGAAAGTGGGAAGTCCAAACCCATTGTCACTGATTCCAgtagtgatgatgatgacgacgacgatgatgaaGAGGGTAAAGAGAACAATAAAGACGCTGAGAAGTCTGTGacggcaattaaaaaaaataaagacactgGAGATAAATCATGTGATAAagaggaagatgatgaagacGAGGAGGACGACGACgaggaagatgatgaagacGAGGAGGACGAGGATGCTCCTGAAGAGGAAAGCAAGAAGGAAGAACAGAAAACTTCTCAGAAGAAATCTGCAAACATGAAATCCACAAAGAAATCTGAGAAGTCAGAACAGACCGCTTCAGATGAAAGTGACCAAGACGTTCATGAAGACAAGAATGCAAAAAAGACAAAAAAGCCTGCAGCAAAGAGGAAAGCTTCAGCAAAACCTGTGCCTAAAACAAAGAAAGCCGACAGCAGCAGCAACCGAGGGAAGAAGAAAGCCAGCAAGAGCAAGGATGAAAGTGAAAgctctgatgatgatgatcagcCGTTGataaagatgattaaaaaacCACCGACTGAGGAACAGCTGAAGGAGGCAATCAAAGATCTATTGAAAGATGCCAACTTGGAGGAAGTTACAATGAAGCAGATCACCCGACAAGTTTATGACAAGTATCCTGATTTTGATCTGACCAGCAGAAAGGAATTCATCAAGGAAACAGTTAAAGGTttgTTATCCTGAAGTAAAGAAAATGCCTTATTTAAAAGGACAGCGAGGGTGAAGGTCCTGTGGACAACTGGATTTTCATTGCACTGTTCACTGTTGTgtagtttctttttattattttatataagttttCAACTTTCAagtaaattctgtttttatgtattttaaagtattttctaaaaatgtacattttcacgTTTGACAGTAAATAATCTGGATGGTTTTGGTTGCTGAAATATGCCACATTTCCGAAGCGAACCTTTCCCCTCTTATTTTAATGGCACATAGTCATATTGCATTTTGACAGTCACATGTGAATTTTTTGGCTGTGTCTTTAAGACCTACAAGTTACCATGTCCTGCAGCTGCATTATCGTTGACATGGTACTGCCAAGATGTTATATGCAATATTTAGGAAGATTTGATTGGTTTCAACTGTTATTAGTGCCGAGTTTTATTTCTAAGGTCctaaatgctaaatgaaaagaaactttTGGACAGATTatgtatttcattataaaacattcagaagtgttaaggttaaggttaagtgAATATTCAATTTCAGTGTTGGCTTAACAGGAATTTGGGATTTTAATACTAATttgtaaaaagcaaaaagcattgatttttttttttatgattcatttttgtaaatatgccttttatgtatttttttccttattttattttgaatttttaaatacaagtcCTAAGGAACAAATATCTTAAGTCTGAGATGTTACTCATACCTGCAGGTCAGTGTTGTAGATTAGGTTTTCTTATAAGACATGAGTTAAGGTTGATCTGTTGTATACGCTGACCTCAGTAACCAGTTTATCAGTTATCATCAGTCATATTGCTCATAACGTGTCAGAaactacaaaatgaaaatgtgcgtttattttgtaataaattgaTTTTTCATAGAAAATA
>XM_043261890.1
GCACCTCCGTCGCGACCAATTGGCAGCAACACTAACGTACAACGGCGGGACTTGCTGCGATTTGCTGCAAAGGGTGCAATTGAGAACCTAATCATACAGTACAGAAATGGAAGCTGTCAAGACAGAGGATCTTCCTTTGGATGGAAAGCCGGTAAAAAAGGGAGAGGAGGAtgacaagaagaaaaagaagagtcCATCTGATGATACGGAGCAGGATGAATCAGAAGAACCTAAACCTAAAAGCAGGTCTAAACCCAAATTGTTTGAACCTGAAATTCTTGAAGGAAAACGGGAGAAAAAAATTATCCAGAGACTTGATTTGATGAGCAAACCGAAGGAAAAGCCAAAGATTGAGAGCATAGGAGAAGGTGCCAAACTGGGAGACATTGTACGGATTAATCACTCCATCGGAAAGCTCAAAGCGCCTCTCCTCAAACCTCTGCATAAGATAGTTTATGATCGGCCAGGAACTGCATCAACACTACGAAAAAACCTTAGGCTGTTTAATGGATTTCCTTTTGGGGAGGAAAGTGAcctttacaacaaaaaaatggagAAGGTGAAAAGgCTTCACAAGGAACAACTCAAAACCATTTGTCAAACTCTTGATCTGGAGAGGTCTGGAACGCAGATTGTTCTTTCAGAAAGGATCATGAAATTTCTTGTACATCCAACCAACTCAGGAAAGCCTATcctaaagaagaaaaagaagacaaCCAAAGATGCCAAAAGAGAAAAGTCTTCatccaaaagtaaaaaaacacagaaaaaggtAGAAAGTGGGAAGTCCAAACCCATTGTCACTGATTCCAgtagtgatgatgatgacgacgacgatgatgaaGAGGGTAAAGAGAACAATAAAGACGCTGAGAAGTCTGTGacggcaattaaaaaaaataaagacactgGAGATAAATCATGTGATAAagaggaagatgatgaagacGAGGAGGACGACGACgaggaagatgatgaagacGAGGAGGACGAGGATGCTCCTGAAGAGGAAAGCAAGAAGGAAGAAAAAACTTCTCAGAAGAAATCTGCAAACATGAAATCCACAAAGAAATCTGAGAAGTCAGAACAGACCGCTTCAGATGAAAGTGACCAAGACGTTCATGAAGACAAGAATGCAAAAAAGACAAAAAAGCCTGCAGCAAAGAGGAAAGCTTCAGCAAAACCTGTGCCTAAAACAAAGAAAGCCGACAGCAGCAGCAACCGAGGGAAGAAGAAAGCCAGCAAGAGCAAGGATGAAAGTGAAAgctctgatgatgatgatcagcCGTTGataaagatgattaaaaaacCACCGACTGAGGAACAGCTGAAGGAGGCAATCAAAGATCTATTGAAAGATGCCAACTTGGAGGAAGTTACAATGAAGCAGATCACCCGACAAGTTTATGACAAGTATCCTGATTTTGATCTGACCAGCAGAAAGGAATTCATCAAGGAAACAGTTAAAGGTttgTTATCCTGAAGTAAAGAAAATGCCTTATTTAAAAGGACAGCGAGGGTGAAGGTCCTGTGGACAACTGGATTTTCATTGCACTGTTCACTGTTGTgtagtttctttttattattttatataagttttCAACTTTCAagtaaattctgtttttatgtattttaaagtattttctaaaaatgtacattttcacgTTTGACAGTAAATAATCTGGATGGTTTTGGTTGCTGAAATATGCCACATTTCCGAAGCGAACCTTTCCCCTCTTATTTTAATGGCACATAGTCATATTGCATTTTGACAGTCACATGTGAATTTTTTGGCTGTGTCTTTAAGACCTACAAGTTACCATGTCCTGCAGCTGCATTATCGTTGACATGGTACTGCCAAGATGTTATATGCAATATTTAGGAAGATTTGATTGGTTTCAACTGTTATTAGTGCCGAGTTTTATTTCTAAGGTCctaaatgctaaatgaaaagaaactttTGGACAGATTatgtatttcattataaaacattcagaagtgttaaggttaaggttaagtgAATATTCAATTTCAGTGTTGGCTTAACAGGAATTTGGGATTTTAATACTAATttgtaaaaagcaaaaagcattgatttttttttttatgattcatttttgtaaatatgccttttatgtatttttttccttattttattttgaatttttaaatacaagtcCTAAGGAACAAATATCTTAAGTCTGAGATGTTACTCATACCTGCAGGTCAGTGTTGTAGATTAGGTTTTCTTATAAGACATGAGTTAAGGTTGATCTGTTGTATACGCTGACCTCAGTAACCAGTTTATCAGTTATCATCAGTCATATTGCTCATAACGTGTCAGAaactacaaaatgaaaatgtgcgtttattttgtaataaattgaTTTTTCATAGAAAATA

Function

symbol description
dek Predicted to enable histone binding activity. Predicted to be involved in regulation of double-strand break repair. Predicted to be active in nucleus. Orthologous to human DEK (DEK proto-oncogene).

NR:

description
PREDICTED: protein DEK-like

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG:

id description
K17046 DEK; protein DEK

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261887.1 False 2406 mRNA 0.38 12 21139170 21146043
XM_043261888.1 False 2409 mRNA 0.37 11 21139170 21146077
XM_043261889.1 True 2472 mRNA 0.37 11 21139170 21146017
XM_043261890.1 False 2403 mRNA 0.37 12 21139170 21146043

Neighbor

gene id symbol gene type direction distance location
LOC122360614 scap,LOC107600505,LOC107717374,LOC107591983,LOC107668298,LOC107713836,LOC107666822 coding downstream 689 21120769 ~ 21138481 (-)
LOC122360714 NA coding downstream 33953 21102727 ~ 21105217 (-)
LOC122360412 nek11,LOC107666729 coding downstream 36702 21056300 ~ 21102468 (-)
LOC122360415 LOC107592535,LOC107666756,LOC107686539,LOC107709748,LOC107556976,LOC107733997 coding downstream 99635 21038523 ~ 21039535 (-)
LOC122360416 nek11 coding downstream 272946 20826228 ~ 20866224 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding upstream 21904 21167981 ~ 21169404 (-)
ccne2 ccne2,LOC107717358,LOC107666792,LOC107600548 coding upstream 169702 21315779 ~ 21321087 (-)
tp53inp1 tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322 coding upstream 176834 21322911 ~ 21329991 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding upstream 187573 21333650 ~ 21346600 (-)
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding upstream 214716 21360793 ~ 21365201 (-)
G114997 NA non-coding downstream 18586 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 303935 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 370083 20768744 ~ 20769087 (-)
G114924 NA non-coding downstream 413499 20724171 ~ 20725671 (-)
G114908 NA non-coding downstream 458949 20677054 ~ 20680221 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding upstream 137387 21283464 ~ 21314746 (-)
G115051 NA non-coding upstream 184935 21331012 ~ 21331358 (-)
G115098 NA non-coding upstream 242738 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 679121 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 727749 21873826 ~ 21874051 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 122065 21012607 ~ 21017105 (-)
G114901 NA other downstream 485596 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 488233 20636125 ~ 20650937 (-)
G114793 NA other downstream 686720 20441965 ~ 20452450 (-)
G114715 NA other downstream 961412 20166795 ~ 20177758 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 229813 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 263882 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 263883 21409960 ~ 21410031 (-)
G115116 NA other upstream 414144 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 459881 21605958 ~ 21614203 (-)

Expression


Co-expression Network