LOC122361022 (LOC107572826,LOC106588695)


Basic Information

Item Value
gene id LOC122361022
gene name LOC107572826,LOC106588695
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10364421 ~ 10372271 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261954.1
ATTGGAATGCTTTGGATTCATCAATTCACTGAAAACCAGCTCACGTAGAGGATTGTCGGTGTGTTTGTTCTTCccgggttttttttaattttacccaGCGTCTTGCAAATTCACGTTAAATTTGTAACACTTAAGGACGCCTGACGAAAGAGTGCTTGTGAGCTCTGTAACGGTAAAGTTGGATGGATCCTCGGGTAGCTTGGATTCAGCCAGAGCAGAAAGGACCTGCCAACGCTTTATGGATGCGCGTATGGGAAACCTCGCAAAGGCGAAACCACTGTCACTCACTGCGGGTAAATACACCTGCGTTGACGGCCAGTTTTATGAAGCGGTTTTCGCAGGTTCCCACCAACACCGCTGGAAAGACTTTTAACAGCTACTCCAATCAGCCTTATAATGATAGTGGTGCCATGAGGTCTCCAAACGCATGTTCTGACTCTGCACCTCCTTATGTCACCCCTATCAGAGTCAACGGTAGTGATCCTTCGTCACCTTTATCTTCAGGTGATTCAGAGAGTGACAGCCCGACGTTAGATTTATCATCAGCCAGGGGTGACAGTATTGGCGCAAATCCAGCCAAAGTTCGCTTTAACTTTACTGAACATATGCACAATGTCAGTAACAGTTTGCAACAACAATATCAGCGACTGCAAGCACAAATAATAATGGATAACCAACTTAAGCATTCAGTGAGAAAGACAAGCGACAATAAGTCGAGCACATATGGAATGAACTACTTTTTGTCCCACTCTAACGGCAGTCATTTATGTGTGACCCCTTGGGCAACTAGAAGATACAGTCCGGGTATTAACGGGCTCCACGAGGAGATagtggatttttatcatttcatgtCACCTCGTCCAGAAGAGGAAGAAATGAGGAGAAATGTTGTTAGCCGTATTGAGGCTGTAATCAAAGATCTGTGGCCTATGGCAAAGgtTGAAATATTTGGCAGCTTTAGTACAGGACTTTACCTTCCTACTAGTGATATTGACCTGGTGGTGTGTGGAAAATGGGAACAACCACCTCTGCAGCAGCTGGAACAGGCACTCAGGCAGAATAAAGTGGCTGAGCCTTTCTCCATTAAACTACTTGATAAGGCTACGGTACCAATAATTAAGCTGactgacagacacacagatgTGAAGGTGGACATTAGTTTTAATGTTGAAACTGGTGTCAAAGCAGCTCTGTTTATTAAGGATCATCTTAGGcgaTATTCTGTGCTGCCTTACTTGATCTTTGTACTGAAGCAGTTTCTGCTCCAGAGAGATTTGAATGAGGTGTTTACGGGCGGTATCAGTTCCTACAGTCTCATTTTAATGGTCATCAGCTTCCTGCAGctCCATCCCAGAATAGACTGCAGAGCTTCAAATATCAATTTGGGCATCCTGCTCATTGAATTCTTTGAATTGTATGGGCGGCATTTTAATTACCTGAAAACAGGCATTCGTGTTAAAGATGGAGGAGCTTATCTTGCTAAAGAGGAGATCATGAAGGTTTTGGAAAATAGATATAGACCGTCAGTGCTCTGTATTGAAGACCCAAATTTGCCAGGAAATGATGTTGGCCGGAGTTCTTACGGTGCCTTTCAGGTGAAGGAGGTATTTAACTATGCATACCTCGTCTTGAGTCATGCTGTGTCACCACTTTCCCGCTCCTACCCCAATAGAAATATGGAAAGCACACTTGGACGCATCATTAAAGTGACCCAGGAAGTGATTGACTACAGGGAGTGGATCATTCAGCAGTGGGGAAACAGACACAATGTCAGGATGTTTGACCGTAAAATTCAGAATGTTGAAGACTCAGAGGAGCAGACCTCAAGTGAGGAGCAGGAGAGAGATTCCTCATCACCACACAGTGCAGGCTCCCCTGTATCACTGTCCCACCTTCAGCAGCACTCTTCAGCTTCCTCATCTTCCTCTGTGTCTTCGTTTTCTGGGAGTGACATAGATTCAGACACGCCATGCAAAGCTTCAGTTCTTCAGAAGTTCTTTCCAGTGTCCTGCATGGCTGATAACAGTAAGAAACCACAGAGAAAAGTGAAATCTGGAACTTTCCTCCACTCCAGAAGTCAGTCGCAACCTTTACCCAGCAAACGATGTATGGATGAGTTGACTTGTGTGAAGGGATTAGTACACGTGTATCCTGTTTACTCCAGCTCCACACCCAGCCCTAGTCACTACACTAATGGATTTGAGGGGCCTCCACAAACTGGTTGTTTAGTCCATAACACTGTGCCTGCCCCCAGAGGTCAACAGTATGGGCATAACAGTTTGCGGCGCCGGCGAAGAGAGACTGCTCCCATGAGTTTCAGCAGATAGTGCTAATCTTTTCTTCTGTCCAAGACAAAGTGTTTGGGCGACAGTCCTTTTCGGTTCAATAGATCAACAGCAGTCTTACACTCAATATGGACAGTGTCTGAAATTGcactttaatttgttttgctcTAACTACACTTTTGAATTTGACTCCATTTGTGCACTTTTCTACCTCCTCTGATTTGTGTTGTCTTAATCTTTGTATGTATAACaaagtttactttttatttttttatttactagtATGTTCAGTTAGtagtttcttttaatttttaaaagtattttggaTGCTGTCTTGTCACAGCATCGCtaggctgttttatttttttttttttattaatattttttttttaaaccattgctGTAAGCCATTGTGAAATACTATCTGCAATGTGACTTTAAAAAggtatttctattttaattttttttgaatgcaaGTTAACATTATActatatgaaattatttttgtatcaaacttctttttaaaagtatccAGTGGATGACTTTTATAGGcacctattttttatttttttgtgtctgtttgcaCAAGTGATCTTTTGATTTAAGgatatgctatttttttacaAGGTGTAGGAATGCTGTCCTTAATCACTTGCATattcttttgcttttcattttttccacCCACCCTCAAATGCATGCAATGGTCTGAATGTTGTTTTCTTGAACTTCCTATTTTGTGACCTTTCATCCACTTtttgaaatggatttttttgtatacatttttgctAGTTCACCATTccttaacaaaatattttacactacATGTTTCCAAACATCTTATAACAAGATTTTTGGCATTTCATACCTTCTTGCACGTTTTGTTGTTTCTAGGGCCTCTGATACAGTCTCCATTTTGACTATTTAGTATATTGACAAGTGAGCCTTAACTCTGCTAGATGTAAAAGAAACACTGCTGGTTTGATGAACAGAGTTTTTTGTGTCTTGAACAAGGACAGTACAGTGATTTAGTTCCAGAAATCAATCACTGAGTACTCTTTTTCACTTGCATGTAGGTACCATTTGAATGTAGTGTATTGTCTTCAGTTTAAGATGTCTCtta

Function

NR:

description
PREDICTED: non-canonical poly(A) RNA polymerase PAPD7-like, partial

GO: NA

KEGG:

id description
K03514 PAPD5_7, TRF4; non-canonical poly(A) RNA polymerase PAPD5/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261954.1 True 3408 mRNA 0.41 13 10364421 10372271

Neighbor

gene id symbol gene type direction distance location
adcy2a adcy2a,LOC107664610,LOC107551198,LOC108429235,LOC108272199 coding downstream 9825 10287086 ~ 10354596 (-)
triob triob,LOC107746974,LOC108429234,LOC106579830,LOC106605411 coding downstream 170127 10099563 ~ 10194294 (-)
cobl LOC107684220,LOC107551210,LOC107746964 coding downstream 309596 10014939 ~ 10054825 (-)
grb10b grb10b,LOC107746967,LOC107551212,LOC107751877,LOC107601668,LOC107704094 coding downstream 353671 9947351 ~ 10010750 (-)
ddc ddc,LOC107551213,LOC107746968,LOC107601670,LOC107751878,LOC106605416 coding downstream 418815 9929336 ~ 9945606 (-)
ice1 LOC107746963,LOC107691875,LOC107566277,LOC107735420 coding upstream 140 10372411 ~ 10386594 (-)
prpf3 prpf3,LOC107677690,LOC107719195 coding upstream 19563 10391834 ~ 10403036 (-)
LOC122361025 LOC107757443,LOC107691877 coding upstream 35744 10408015 ~ 10422279 (-)
mal2 mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116 coding upstream 180889 10553160 ~ 10569797 (-)
colec10 LOC107738939,LOC107574455,LOC107677951 coding upstream 199480 10571751 ~ 10587718 (-)
G111097 NA non-coding downstream 488757 9875392 ~ 9875664 (-)
G111048 NA non-coding downstream 609441 9754315 ~ 9754980 (-)
G111045 NA non-coding downstream 687916 9674864 ~ 9676505 (-)
G111025 NA non-coding downstream 740302 9623700 ~ 9624119 (-)
G111024 NA non-coding downstream 743968 9620119 ~ 9620453 (-)
G111298 NA non-coding upstream 357897 10730168 ~ 10730415 (-)
G111329 triob,LOC107746974,LOC107551199,LOC107684227,LOC107601652,LOC107751902 non-coding upstream 419293 10791564 ~ 10793616 (-)
LOC122361039 NA non-coding upstream 551844 10924115 ~ 10924764 (-)
G111393 NA non-coding upstream 787568 11159839 ~ 11160056 (-)
G111420 NA non-coding upstream 852915 11225186 ~ 11225409 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other downstream 461440 9877211 ~ 9902981 (-)
G110974 NA other downstream 1091816 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 1212238 9145930 ~ 9152183 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 1728199 8633350 ~ 8636222 (-)
G110556 NA other downstream 2047736 8312265 ~ 8316685 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 373305 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 485249 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 897349 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 960904 11333175 ~ 11386993 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other upstream 1038407 11410678 ~ 11411777 (-)

Expression


Co-expression Network