LOC122361025 (LOC107757443,LOC107691877)


Basic Information

Item Value
gene id LOC122361025
gene name LOC107757443,LOC107691877
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10408015 ~ 10422279 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261956.1
CGTGTGTCCATGCACATGTTGACACTCGGTAAgtgaggagagagagtgagcgcAGATAGGGAGCTGATCTTTGGGGTAGAGTAGACGATATCGTCGGGAAGGGTTTACGTTGTTTGCACAGGTGCCCTGAAGTtgagTCATGCAGTCTACAGAATCTATTTCCTCTCAGCCATCACAGGATTCACTAAGCTAcaagaataatttattgttCAGTGATGATGAAAcggatgtttttcttttggagGACAGGGACAAGTCCCATGGAATTCATTCAACTCAGTCATGTCGCTCTAACGGCAATGCTTACAGTATGAACATGGAGCAGGAGCATCCTGGATCTCAGTGGGCATGTGATGGGTTCATTGTGTCTAGTGACCCTGAGAGGTCACAGGACAACAGTCATGCTAGGTCAACATCTTCATCCATCTCATCatatctgtctctctcctcaTCATCTTTGTCTGTATTTGGATGGAATAGCTCAGAATGTGAGCAAGGGAAGAATGAAGGAACTGAAGGTGACCTGCTGTTTGCTCGTAAGTGTTTAGAACTCCAGGGATATGTTCAGCCTTTGCTGGAGCTTCTTATTGGACTAAAGAAAGGGCGATTTGACAAAGGTCTGAGCAGTTTTCAGCAGAGTGTTGCAATGGACAGAATTCAGAGGATTGTAGGAGTCCTGCAGAAACCGCATATTGGAGAGAAGTACTTACCTACTTTGCTGCAGATAGAGGTGATGCTAAAGCTTTGGTTCCCTCAAGTTACTGCTCAAGTTTCTGTGACACCTAACCCTGCTGACCTTACACCTCAAAACATTTCTACCAATGGCATCAGCAATATCACTCCTCCACACAAGCACAAAGACCAATTGCATATTCCAGTCAAGAAGCGAAGATTGAGCTGGTCAGACACAGATTCACCCTCTTCTTCACCTCACATGGTGTGTAAAATCTCCAAACTTGAATGCTGTGAAGAGCAACATCAATGGCCACCCTCTTCTCTTTtctcaaagatgaacaaatcaGTCAGGCAATTTGGTGAAACCCTGGAGAACAAGGCTATCCGGTGGTCCGGTTCAAGACTGACATGGATGCACGTTGCGCCCATTTTTTCCCCACCTAAATCTGGTCCCTCTCATAATGGTGGAATGGCAAAAGAAAGAGGAAGCAGAAATATCCTCCTTCCAGTTTCCCCTCTCACCAGCAGGAGCAGTCCAGCAATGCAGGACAGCTTTGTCTCTTCCACTACACATTTTTCAGAGCCAACTAAATACCAGTTCCAGTCTGTAAGTTTAGGGACAGCAAGTCCTCTGCAGGAGTATGTCCAAACTCCACCAATCACAATGAAGCCTTCAAACCTTGTACAGCAAACCGCTATACAAACCTAATGCAAAAAAGCACAATCAAAAAGAAAGTCTTCTCAGTGTCGGATAAGAATTGAAGTATAGGATTTATTGAAGgttgtttaaaaaagaattgCAAAAACTCAACATTGCAAGACTTGAATTTTATATTGATTGGGTTGAAAATTTGGCTCTTTTGaacttgaaaagaaaataacctAAATTTAATGTGAAATAGATTTAGTCAGTCAAACAGATAGCCCTGCCCCAGAATTGTGACATTGGTTGTCCTGAACAAGATGCTTAAACACTTTTGCCCATCTGAGCCACAGTTTTGTCATGACAGTAAACgtccagaaaaaaatatacatttcgtCAGAGAAATGTGAATTAGCTTGTGGATGTGCCGTTTAATCTGAGGGACGTTATAGTCATTGACTATgctttaattataaaacaagGTTTTAAATTAAGACcgcaatcattttaataaagggTTAAACACAATCTCAAGCAAGTGTTAGgcatatgaaattaaatgtttactttttgctgtattttgttttctattgaaTTTCTACTGAAAATGCTGagaattacatttgttttaattacagtttgaAAAAGCTGCTAGTAGGCAATATAGTTCTGGTGTGAAAGGTCCTTTTTGTAGCTCTGAGGGAGAATGTAGCAGCAGCATAACTGACTTTTCAATATGTGATATATTGTGAATTTATGAATGGGTTGTAACAGAAGttgttacagttttatttactgcattttataaAGGCAGTCAATTTACCCCACCCTAGTGCACATAGCTCCCACTGGTTTGGGTGGTTTATGGAGACCCAATTTAgtgaaattagaaaaaaaaaaaaaaatcagtaataggtaggtttaggtgtatgGTTGGTGTTTTAGGctgatagaaaatacagtttgtataGTATAaaaagtgagtgagtgagtgagtgagagtatttttaaattaaaattaaccatttgatttatttgctgTATAATATTTGTGACAACACATCAAACTGGGCAAACTAACCACAGCTACTATACACATTATGTTAGCATGTCTAAATAAGCAATGTCAGATGGTCCATGATGGCCATATGATTCTCAGCATCATATTATGTAGGAAATTATGTAATGCCTAGgttgaaagagaaaagaacattttgatgGAAGACCTCACAGATGAGAATTTAAGTGCTTGAATGTTGAGTGATATTAGACATCTAAACATGTCAGAAACAAGGACAAAATCATCATAAATAGTACTAATATGGCaacctttatttattcaattgttGATTTCaacagttatttataaatatttgtatatgtatttattattatggcAGCTGAGTTCATGGAGTATTTATTCAAACGTCAGGTTTTTGCCATGGAATTGctgtgtgggaaaaaaaaagaaggaaatctGAAATTGGGAAACCTGTGCCTTTTTTCTAggaacaatattaatattctaattCATGTTCGTatttgttgtgtatttttatcaaatggttcaaaacaaaatctcaaaatagaaaactgcACTTGGATACAATAACAATTTACCACTAACTGAACGGTAAAGTACAGTAATTAATATAACCAAgaacaaatatttcaatttgaaatggtcatataaatattcaaagaGAACATGTATTTTTTGACTAGTCGCTTCAACACAGTTGTGATGCATCCAGGAACCTTGTGGGTGCATTGATTTATGCAtcagttcatttattaaaaaaaaaaaaagaagaaaataaaaattatttagtaaaCAAGGTAATAATAAGGgacaaaaaatgcaattttacaattttacatatatgaataaataaattgcttaaAGTCCAGGTGTCCCTAACAATAGAAATTTTTACCATGTTGAAAATCCGAACTGATATCTGCGTCAGCTTTGTTATATGTATTTGACTTTTTTACATAATGATTTTGTAGAAATTGGTTGCActtactttaattttattttgtcatgttttatactgtattgGTTAAGACCAAGAACAATGATAATAAAGGATGTATAATGGTTGTTTAATCTGTCTTTTATAAAACTATTGTAACACACCACACACTGGAAATCTTTCTACTGTCTGTCCTTATTTCCATTctctctgtcattttatttatttatttagtgctttATACAAAACAGACTGTGTTAAAGAAGCTTTTTCTCTTTGTCCTCCAcctgtttttctcttcttcatgGTGTACGTTTATTCTTATCTTCTctgttttttactgttattcatgtttttccaaaaaaacgagcattttaataaacgttaagcattttaa

Function

NR:

description
PREDICTED: circadian-associated transcriptional repressor-like

GO: NA

KEGG:

id description
K21599 CIART, CHRONO, GM129; circadian-associated transcriptional repressor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261956.1 True 3694 mRNA 0.36 6 10408015 10422279

Neighbor

gene id symbol gene type direction distance location
prpf3 prpf3,LOC107677690,LOC107719195 coding downstream 4979 10391834 ~ 10403036 (-)
ice1 LOC107746963,LOC107691875,LOC107566277,LOC107735420 coding downstream 21421 10372411 ~ 10386594 (-)
LOC122361022 LOC107572826,LOC106588695 coding downstream 35744 10364421 ~ 10372271 (-)
adcy2a adcy2a,LOC107664610,LOC107551198,LOC108429235,LOC108272199 coding downstream 53419 10287086 ~ 10354596 (-)
triob triob,LOC107746974,LOC108429234,LOC106579830,LOC106605411 coding downstream 213721 10099563 ~ 10194294 (-)
mal2 mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116 coding upstream 130881 10553160 ~ 10569797 (-)
colec10 LOC107738939,LOC107574455,LOC107677951 coding upstream 149472 10571751 ~ 10587718 (-)
LOC122361028 cabz01093075.1,LOC107601667,LOC107751875,LOC107746976,LOC107704092,LOC107684228,LOC107551204 coding upstream 386058 10808337 ~ 10811017 (-)
LOC122361032 LOC107746978,LOC107684223,LOC107551206,LOC107704083,LOC107751909,LOC107601659 coding upstream 395612 10817891 ~ 10823189 (-)
LOC122360214 LOC107752837,LOC107662667,LOC107581612 coding upstream 1015094 11437373 ~ 11453509 (-)
G111097 NA non-coding downstream 532351 9875392 ~ 9875664 (-)
G111048 NA non-coding downstream 653035 9754315 ~ 9754980 (-)
G111045 NA non-coding downstream 731510 9674864 ~ 9676505 (-)
G111025 NA non-coding downstream 783896 9623700 ~ 9624119 (-)
G111024 NA non-coding downstream 787562 9620119 ~ 9620453 (-)
G111298 NA non-coding upstream 307889 10730168 ~ 10730415 (-)
G111329 triob,LOC107746974,LOC107551199,LOC107684227,LOC107601652,LOC107751902 non-coding upstream 369285 10791564 ~ 10793616 (-)
LOC122361039 NA non-coding upstream 501836 10924115 ~ 10924764 (-)
G111393 NA non-coding upstream 737560 11159839 ~ 11160056 (-)
G111420 NA non-coding upstream 802907 11225186 ~ 11225409 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other downstream 505034 9877211 ~ 9902981 (-)
G110974 NA other downstream 1135410 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 1255832 9145930 ~ 9152183 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 1771793 8633350 ~ 8636222 (-)
G110556 NA other downstream 2091330 8312265 ~ 8316685 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 323297 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 435241 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 847341 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 910896 11333175 ~ 11386993 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other upstream 988399 11410678 ~ 11411777 (-)

Expression


Co-expression Network